Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g19320 Schrenkiella parvula HOM05D009980 ORTHO05D014334 1.3e-45 186.0 93 100.0
C07p39570 Brassica napus HOM05D009980 ORTHO05D014334 6.8e-31 137.1 93 71.0
BolC7t44481H Brassica oleracea HOM05D009980 ORTHO05D014334 8.9e-31 136.7 93 71.0
BraA06t26783Z Brassica rapa HOM05D009980 ORTHO05D014334 3.4e-30 134.8 93 69.9
A06p38700 Brassica napus HOM05D009980 ORTHO05D014334 4.4e-30 134.4 93 71.0
Thhalv10023920m.g Eutrema salsugineum HOM05D009980 ORTHO05D014334 1.1e-28 129.8 93 71.0
Thhalv10005194m.g Eutrema salsugineum HOM05D009980 ORTHO05D014334 1.0e-26 123.2 94 68.1
Carub.0008s0867 Capsella rubella HOM05D009980 ORTHO05D014334 7.3e-25 117.1 93 65.6
BcaC06g30739 Brassica carinata HOM05D009980 ORTHO05D014334 6.2e-24 114.0 68 75.0
AT5G48945 Arabidopsis thaliana HOM05D009980 ORTHO05D014334 8.1e-24 113.6 92 60.9
AL8G22160 Arabidopsis lyrata HOM05D009980 ORTHO05D014334 3.1e-23 111.7 87 60.9
CARHR284610 Cardamine hirsuta HOM05D009980 ORTHO05D014334 7.8e-19 97.1 67 70.1
Carub.0008s0744 Capsella rubella HOM05D009980 ORTHO05D014334 5.6e-17 90.9 93 51.6
Aa31csc310G20 Aethionema arabicum HOM05D009980 ORTHO05D014334 7.3e-17 90.5 74 58.1
AL7G42540 Arabidopsis lyrata HOM05D009980 ORTHO05D015953 1.4e-15 86.3 95 52.6
Carub.0007s2851 Capsella rubella HOM05D009980 ORTHO05D015953 4.0e-15 84.7 96 55.2
Thhalv10027134m.g Eutrema salsugineum HOM05D009980 ORTHO05D015953 6.8e-15 84.0 101 46.5
AT4G13955 Arabidopsis thaliana HOM05D009980 ORTHO05D015953 1.4e-12 76.3 96 51.0
Thhalv10026792m.g Eutrema salsugineum HOM05D009980 ORTHO05D015953 7.1e-12 73.9 89 49.4
Carub.0007s2850 Capsella rubella HOM05D009980 ORTHO05D015953 1.3e-08 63.2 76 46.1
C07p63470 Brassica napus HOM05D011068 ORTHO05D013196 2.1e-08 62.4 73 49.3
BolC7t46761H Brassica oleracea HOM05D011068 ORTHO05D013196 2.1e-08 62.4 73 49.3
A06p48810 Brassica napus HOM05D011068 ORTHO05D013196 2.8e-08 62.0 86 46.5
Carub.0007s3057 Capsella rubella HOM05D017884 ORTHO05D023688 2.8e-08 62.0 90 42.2
BraA06t27749Z Brassica rapa HOM05D011068 ORTHO05D013196 3.6e-08 61.6 73 49.3
Carub.0007s3056 Capsella rubella HOM05D017884 ORTHO05D023688 6.2e-08 60.8 90 41.1
BolC4t25769H Brassica oleracea HOM05D009980 ORTHO05D015953 1.8e-07 59.3 68 47.1
Thhalv10027228m.g Eutrema salsugineum HOM05D011068 ORTHO05D013196 6.9e-07 57.4 73 43.8
BraA04t16508Z Brassica rapa HOM05D009980 ORTHO05D015953 1.5e-06 56.2 69 47.8
BolC7t41449H Brassica oleracea HOM05D014474 ORTHO05D017403 7.6e-06 53.9 78 42.3
AT1G56233 Arabidopsis thaliana HOM05D014474 ORTHO05D038778 9.9e-06 53.5 88 42.0


User provided reference genes

Program Settings