Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g18640 Schrenkiella parvula HOM05D000913 ORTHO05D000687 4.9e-55 218.0 149 100.0
CARHR184000 Cardamine hirsuta HOM05D000913 ORTHO05D000687 7.1e-38 161.0 166 69.9
Carub.0008s0784 Capsella rubella HOM05D000913 ORTHO05D000687 1.1e-33 147.1 178 68.0
AT5G48290 Arabidopsis thaliana HOM05D000913 ORTHO05D000687 8.9e-33 144.1 191 67.5
THA.LOC104822446 Tarenaya hassleriana HOM05D000913 ORTHO05D000687 1.2e-32 143.7 168 67.9
CARHR082300 Cardamine hirsuta HOM05D000913 ORTHO05D000687 4.4e-32 141.7 166 58.4
A06p39280 Brassica napus HOM05D000913 ORTHO05D000687 2.2e-31 139.4 188 64.4
Thhalv10021695m.g Eutrema salsugineum HOM05D000913 ORTHO05D000687 1.1e-30 137.1 172 60.5
BolC1t05541H Brassica oleracea HOM05D000191 ORTHO05D000122 1.9e-30 136.3 171 69.0
BcaB03g14690 Brassica carinata HOM05D000913 ORTHO05D000687 3.2e-30 135.6 172 50.6
Sp3g06540 Schrenkiella parvula HOM05D000913 ORTHO05D000687 4.1e-30 135.2 172 61.6
AT3G07600 Arabidopsis thaliana HOM05D000913 ORTHO05D000687 7.1e-30 134.4 177 59.9
A03p35370 Brassica napus HOM05D000913 ORTHO05D000687 7.1e-30 134.4 172 48.8
BraA03t12715Z Brassica rapa HOM05D000913 ORTHO05D000687 7.1e-30 134.4 172 48.8
Aa31LG5G18190 Aethionema arabicum HOM05D000913 ORTHO05D000687 2.7e-29 132.5 178 62.9
BolC3t16566H Brassica oleracea HOM05D000913 ORTHO05D000687 4.6e-29 131.7 172 48.3
BcaB04g21280 Brassica carinata HOM05D000913 ORTHO05D000687 6.0e-29 131.3 173 65.9
BcaC01g04273 Brassica carinata HOM05D000913 ORTHO05D000687 2.3e-28 129.4 172 47.7
C03p42980 Brassica napus HOM05D000913 ORTHO05D000687 2.3e-28 129.4 172 47.7
BraA06t26842Z Brassica rapa HOM05D000913 ORTHO05D000687 2.5e-27 125.9 175 64.0
A05p40590 Brassica napus HOM05D000913 ORTHO05D000687 4.3e-27 125.2 172 59.9
BraA05t22790Z Brassica rapa HOM05D000913 ORTHO05D000687 4.3e-27 125.2 172 62.8
AL8G21010 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 7.3e-27 124.4 179 68.7
BraA01t04371Z Brassica rapa HOM05D000191 ORTHO05D000122 2.1e-26 122.9 175 63.4
Carub.0003s0717 Capsella rubella HOM05D000913 ORTHO05D000687 4.4e-24 115.2 201 42.8
BcaC06g30813 Brassica carinata HOM05D000913 ORTHO05D000687 6.4e-23 111.3 170 66.5
BolC7t44424H Brassica oleracea HOM05D000913 ORTHO05D000687 7.8e-21 104.4 210 55.2
AL3G18960 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 8.1e-18 94.4 83 66.3
AL8G14310 Arabidopsis lyrata HOM05D000913 ORTHO05D000687 1.4e-17 93.6 83 66.3
C07p39050 Brassica napus HOM05D000913 ORTHO05D000687 7.1e-14 81.3 194 52.1
Aqoxy4G01749 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 8.4e-07 57.8 166 28.9
Carub.0008s0291 Capsella rubella HOM05D000005 ORTHO05D012152 8.4e-07 57.8 79 49.4
Gohir.D07G169300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 1.1e-06 57.4 83 41.0
Gorai.001G189300 Gossypium raimondii HOM05D000913 ORTHO05D000687 1.1e-06 57.4 83 41.0
Gohir.D11G154200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 5.5e-06 55.1 84 40.5
Gorai.007G164300 Gossypium raimondii HOM05D000913 ORTHO05D000687 7.1e-06 54.7 84 40.5


User provided reference genes

Program Settings