Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 2.6e-167 592.0 312 100.0
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 7.3e-154 547.4 315 92.4
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 4.3e-138 495.0 317 85.5
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 4.8e-137 491.5 320 85.6
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 6.2e-137 491.1 316 85.4
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 4.0e-136 488.4 320 84.4
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 5.3e-136 488.0 316 84.2
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 4.5e-135 485.0 346 79.2
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.3e-134 483.4 316 82.3
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 9.3e-133 477.2 318 83.3
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 4.6e-132 474.9 351 76.9
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 1.9e-130 469.5 318 81.4
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 3.1e-128 462.2 315 80.0
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 1.3e-121 440.3 318 78.6
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 3.2e-117 425.6 318 77.7
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 7.9e-116 421.0 357 70.0
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 6.7e-115 417.9 318 75.8
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 9.7e-106 387.5 265 80.8
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 9.4e-93 344.4 264 78.0
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 5.2e-91 338.6 308 65.3
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.6e-87 327.0 313 61.7
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 8.8e-83 311.2 317 60.3
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 5.4e-80 302.0 314 59.2
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.6e-79 300.4 323 57.3
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.7e-79 299.7 293 61.1
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.7e-78 297.0 315 57.5
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 5.0e-78 295.4 318 56.9
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 8.6e-78 294.7 324 55.9
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 3.3e-77 292.7 308 56.5
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.3e-77 292.4 308 56.2
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 5.6e-77 292.0 312 57.1
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 7.3e-77 291.6 309 56.3
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 7.3e-77 291.6 312 57.1
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 3.6e-76 289.3 322 58.1
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 8.9e-75 284.6 313 55.9
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 2.6e-74 283.1 311 55.0
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 3.4e-74 282.7 325 54.5
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 5.7e-74 282.0 295 56.3
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 7.5e-74 281.6 315 53.7
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 9.8e-74 281.2 314 54.8
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 4.1e-72 275.8 313 54.0
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 4.1e-72 275.8 301 54.5
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 9.2e-72 274.6 314 54.1
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.7e-71 273.1 294 57.8
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 2.7e-71 273.1 334 51.5
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 5.9e-71 271.9 330 54.5
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 7.8e-71 271.6 345 51.3
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 7.8e-71 271.6 337 52.2
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 1.0e-70 271.2 313 54.6
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 1.7e-70 270.4 313 52.7
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 3.9e-70 269.2 323 53.9
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 5.0e-70 268.9 320 53.4
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 5.0e-70 268.9 312 53.2
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 5.0e-70 268.9 314 52.9
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 1.1e-69 267.7 330 50.3
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.5e-69 267.3 340 50.0
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 9.5e-69 264.6 320 52.2
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 3.6e-68 262.7 328 51.5
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 1.0e-67 261.2 331 49.2
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 5.2e-67 258.8 312 51.9
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 8.9e-67 258.1 311 49.8
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 2.0e-66 256.9 297 53.5
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 2.0e-66 256.9 279 57.3
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 4.4e-66 255.8 328 51.2
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 7.5e-66 255.0 321 49.2
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 7.5e-66 255.0 334 48.5
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 9.8e-66 254.6 336 49.1
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 1.4e-64 250.8 281 56.2
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.9e-64 250.4 316 51.3
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.4e-64 250.0 321 51.4
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 5.4e-64 248.8 316 49.7
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 9.2e-64 248.1 315 52.4
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 9.2e-64 248.1 334 49.7
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 4.6e-63 245.7 331 47.1
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 6.0e-63 245.4 313 51.4
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 6.0e-63 245.4 311 49.8
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 2.3e-62 243.4 215 65.6
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 6.6e-62 241.9 278 53.2
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 3.3e-61 239.6 284 52.1
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 4.3e-61 239.2 301 50.8
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 4.7e-60 235.7 298 51.3
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 8.1e-60 235.0 313 50.5
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 8.1e-60 235.0 317 48.3
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 8.1e-60 235.0 374 45.5
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.1e-59 234.6 313 49.8
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 3.1e-59 233.0 313 50.5
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 6.8e-59 231.9 335 48.1
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 2.6e-58 229.9 292 50.0
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 2.6e-58 229.9 307 49.8
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 3.4e-58 229.6 318 48.1
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 9.8e-58 228.0 301 49.2
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 9.8e-58 228.0 323 45.5
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.9e-57 226.5 259 54.1
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 6.4e-57 225.3 326 47.9
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 8.3e-57 224.9 347 44.4
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 8.3e-57 224.9 294 52.0
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 5.4e-56 222.2 167 68.9
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 4.6e-55 219.2 321 48.3
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 6.6e-54 215.3 322 46.9
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.1e-53 214.5 322 46.9
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 2.5e-53 213.4 301 46.5
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 7.3e-53 211.8 336 45.5
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.1e-52 210.3 267 53.2
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 6.2e-52 208.8 320 42.5
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 8.1e-52 208.4 281 47.7
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.4e-51 207.6 323 43.7
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 7.6e-50 201.8 359 41.2
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 6.4e-49 198.7 298 47.3
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 4.1e-48 196.1 487 34.9
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 1.6e-47 194.1 214 57.5
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 1.6e-47 194.1 252 50.4
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 3.9e-46 189.5 281 47.0
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 1.9e-45 187.2 259 48.3
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 2.4e-43 180.3 186 57.5
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 6.9e-43 178.7 274 43.8
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 6.4e-41 172.2 291 45.0
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.2e-39 167.9 319 41.7
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.2e-39 167.9 297 43.1
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 6.6e-38 162.2 217 50.2
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.5e-37 161.0 109 76.1
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 5.6e-37 159.1 321 40.5
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 4.0e-35 152.9 109 73.4
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 9.9e-34 148.3 106 73.6
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 2.7e-31 140.2 143 57.3
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 5.1e-30 136.0 192 42.7
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 1.7e-25 120.9 190 43.7
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 1.6e-23 114.4 110 59.1
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 1.5e-21 107.8 227 37.0
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 1.6e-20 104.4 102 56.9
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.6e-20 104.4 181 41.4
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 1.3e-17 94.7 79 63.3
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.7e-17 94.4 205 38.0
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.9e-16 90.9 69 63.8
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.6e-15 87.8 215 33.0
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.6e-15 87.8 215 33.0
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 2.3e-14 84.0 180 35.0
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 1.6e-12 77.8 86 53.5
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 9.0e-11 72.0 66 62.1
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 1.0e-09 68.6 297 31.3
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 3.8e-09 66.6 177 35.0
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 5.1e-06 56.2 49 57.1


User provided reference genes

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