Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g18330 Schrenkiella parvula HOM05D005090 ORTHO05D006142 6.4e-91 337.4 172 100.0
C07p38740 Brassica napus HOM05D005090 ORTHO05D006142 4.9e-83 311.2 173 91.3
BolC7t44393H Brassica oleracea HOM05D005090 ORTHO05D006142 4.9e-83 311.2 173 91.3
Thhalv10005720m.g Eutrema salsugineum HOM05D005090 ORTHO05D006142 1.2e-81 306.6 173 90.8
BraA06t26868Z Brassica rapa HOM05D005090 ORTHO05D006142 4.7e-78 294.7 173 89.0
A06p39530 Brassica napus HOM05D005090 ORTHO05D006142 1.4e-77 293.1 173 88.4
Carub.0008s0737 Capsella rubella HOM05D005090 ORTHO05D006142 4.0e-77 291.6 173 86.1
AL8G19800 Arabidopsis lyrata HOM05D005090 ORTHO05D006142 5.2e-77 291.2 173 85.5
AT5G47830 Arabidopsis thaliana HOM05D005090 ORTHO05D006142 4.4e-76 288.1 174 83.9
BolC2t11671H Brassica oleracea HOM05D005090 ORTHO05D006142 7.1e-74 280.8 176 83.5
BcaC03g17615 Brassica carinata HOM05D005090 ORTHO05D006142 9.2e-74 280.4 175 82.9
C02p56140 Brassica napus HOM05D005090 ORTHO05D006142 4.6e-73 278.1 175 82.3
CARHR184350 Cardamine hirsuta HOM05D005090 ORTHO05D006142 6.0e-73 277.7 177 84.2
BraA02t08700Z Brassica rapa HOM05D005090 ORTHO05D006142 1.1e-71 273.5 175 80.0
A02p37140 Brassica napus HOM05D005090 ORTHO05D006142 4.3e-71 271.6 175 79.4
BcaB07g30052 Brassica carinata HOM05D005090 ORTHO05D006142 5.8e-68 261.2 176 79.0
Aa31LG3G14010 Aethionema arabicum HOM05D005090 ORTHO05D006142 2.2e-67 259.2 172 76.7
THA.LOC104807114 Tarenaya hassleriana HOM05D005090 ORTHO05D006142 3.8e-59 231.9 176 67.0
BcaB05g23208 Brassica carinata HOM05D005090 ORTHO05D006142 6.2e-54 214.5 124 84.7
BcaB04g18280 Brassica carinata HOM05D005090 ORTHO05D006142 3.4e-52 208.8 117 88.0
Cfa009959 Carpinus fangiana HOM05D005090 ORTHO05D006142 1.8e-48 196.4 173 58.4
Prupe.1G431400 Prunus persica HOM05D005090 ORTHO05D006142 8.7e-48 194.1 178 58.4
Atru.chr13.741 Acer truncatum HOM05D005090 ORTHO05D006142 4.3e-47 191.8 169 57.4
Ca_13273_v3 Cicer arietinum L. HOM05D005090 ORTHO05D006142 7.4e-47 191.0 163 57.1
Gohir.D06G019036 Gossypium hirsutum HOM05D005090 ORTHO05D006142 1.3e-46 190.3 146 64.4
Gorai.010G022500 Gossypium raimondii HOM05D005090 ORTHO05D006142 1.3e-46 190.3 146 64.4
Eucgr.F02314 Eucalyptus grandis HOM05D005090 ORTHO05D006142 1.6e-46 189.9 141 66.0
Duzib041G0676 Durio zibethinus HOM05D005090 ORTHO05D006142 2.8e-46 189.1 145 64.1
ClCG05G020140 Citrullus lanatus HOM05D005090 ORTHO05D006142 4.8e-46 188.3 168 59.5
Phvul.001G024300 Phaseolus vulgaris HOM05D005090 ORTHO05D006142 6.2e-46 188.0 168 54.2
Ciclev10002608m.g Citrus clementina HOM05D005090 ORTHO05D006142 8.1e-46 187.6 180 53.3
CiPaw.15G053600 Carya illinoinensis HOM05D005090 ORTHO05D006142 1.1e-45 187.2 173 56.6
Glyma.14G085300 Glycine max HOM05D005090 ORTHO05D006142 1.8e-45 186.4 157 58.6
FAN20G1047 Fragaria x ananassa HOM05D005090 ORTHO05D006142 2.4e-45 186.0 147 63.3
Sed0001046 Sechium edule HOM05D005090 ORTHO05D006142 2.4e-45 186.0 148 61.5
MD08G1095400 Malus domestica HOM05D005090 ORTHO05D006142 4.0e-45 185.3 143 63.6
Aqoxy6G01237 Aquilegia oxysepala HOM05D005090 ORTHO05D006142 5.3e-45 184.9 146 61.0
AUR62036618 Chenopodium quinoa HOM05D005090 ORTHO05D006142 5.3e-45 184.9 149 63.1
FvH4_2g33950 Fragaria vesca HOM05D005090 ORTHO05D006142 5.3e-45 184.9 147 62.6
FAN24G0633 Fragaria x ananassa HOM05D005090 ORTHO05D006142 5.3e-45 184.9 147 62.6
Duzib093G0455 Durio zibethinus HOM05D005090 ORTHO05D006142 6.9e-45 184.5 146 62.3
FAN27G2315 Fragaria x ananassa HOM05D005090 ORTHO05D006142 6.9e-45 184.5 147 62.6
Lj5g0006850 Lotus japonicus HOM05D005090 ORTHO05D006142 6.9e-45 184.5 143 62.2
Peaxi162Scf00121g00414 Petunia axillaris HOM05D005090 ORTHO05D006142 6.9e-45 184.5 148 60.8
VMungo0647G1453 Vigna mungo HOM05D005090 ORTHO05D006142 9.0e-45 184.1 165 56.4
Actinidia22653 Actinidia chinensis HOM05D005090 ORTHO05D006142 1.2e-44 183.7 147 61.2
Glyma.17G239400 Glycine max HOM05D005090 ORTHO05D006142 1.2e-44 183.7 143 61.5
Manes.18G040700 Manihot esculenta HOM05D005090 ORTHO05D006142 1.2e-44 183.7 170 54.7
Sabra14G0016700 Salix brachista HOM05D005090 ORTHO05D006142 1.2e-44 183.7 152 59.2
Nitab4.5_0004730g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.5e-44 183.3 147 58.5
Sed0019095 Sechium edule HOM05D005090 ORTHO05D006142 1.5e-44 183.3 168 56.0
Actinidia01086 Actinidia chinensis HOM05D005090 ORTHO05D006142 2.0e-44 183.0 147 61.2
CSS0005413 Camellia sinensis var. sinensis HOM05D005090 ORTHO05D006142 2.0e-44 183.0 169 55.0
FAN15G0851 Fragaria x ananassa HOM05D005090 ORTHO05D006142 2.0e-44 183.0 147 62.6
Cpa.g.sc21.163 Carica papaya HOM05D005090 ORTHO05D006142 2.6e-44 182.6 168 56.5
Lalb_Chr22g0354971 Lupinus albus HOM05D005090 ORTHO05D006142 2.6e-44 182.6 164 53.7
Oeu009772.1 Olea europaea HOM05D005090 ORTHO05D006142 2.6e-44 182.6 169 53.8
RcHm_v2.0_Chr6g0308461 Rosa chinensis HOM05D005090 ORTHO05D006142 2.6e-44 182.6 147 61.9
arahy.Tifrunner.gnm1.ann1.LLUM42 Arachis hypogaea HOM05D005090 ORTHO05D006142 3.4e-44 182.2 148 58.1
arahy.Tifrunner.gnm1.ann1.Q1327U Arachis hypogaea HOM05D005090 ORTHO05D006142 3.4e-44 182.2 148 58.1
PGR031G1041 Punica granatum HOM05D005090 ORTHO05D006142 3.4e-44 182.2 142 63.4
TAR376G0388 Trochodendron aralioides HOM05D005090 ORTHO05D006142 3.4e-44 182.2 179 55.9
Rhsim06G0054600 Rhododendron simsii HOM05D005090 ORTHO05D006142 4.5e-44 181.8 152 58.6
CANSAT25G3428 Cannabis sativa HOM05D005090 ORTHO05D006142 5.8e-44 181.4 154 61.7
GSVIVG01009445001 Vitis vinifera HOM05D005090 ORTHO05D006142 9.9e-44 180.6 163 55.2
MD15G1077900 Malus domestica HOM05D005090 ORTHO05D006142 1.3e-43 180.3 165 55.8
Nitab4.5_0002548g0010 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.7e-43 179.9 151 57.0
Medtr1g018930 Medicago truncatula HOM05D005090 ORTHO05D006142 2.9e-43 179.1 163 54.6
CAN.G1030.34 Capsicum annuum HOM05D005090 ORTHO05D006142 3.8e-43 178.7 144 60.4
MELO3C016776.2 Cucumis melo HOM05D005090 ORTHO05D006142 6.4e-43 177.9 150 60.7
Potri.014G024500 Populus trichocarpa HOM05D005090 ORTHO05D006142 6.4e-43 177.9 148 59.5
Sopen04g032180 Solanum pennellii HOM05D005090 ORTHO05D006142 6.4e-43 177.9 148 56.1
Solyc04g078600.3 Solanum lycopersicum HOM05D005090 ORTHO05D006142 8.4e-43 177.6 148 56.8
TWI36G0811 Tripterygium wilfordii HOM05D005090 ORTHO05D006142 1.1e-42 177.2 178 53.4
Sc15g0005920 Simmondsia chinensis HOM05D005090 ORTHO05D006142 1.9e-42 176.4 146 61.6
Potri.002G123400 Populus trichocarpa HOM05D005090 ORTHO05D006142 4.2e-42 175.3 164 52.4
CANSAT56G0556 Cannabis sativa HOM05D005090 ORTHO05D006142 5.5e-42 174.9 150 62.0
EL10As7g23773 Beta vulgaris HOM05D005090 ORTHO05D006142 1.6e-41 173.3 153 58.2
PGSC0003DMG400007949 Solanum tuberosum HOM05D005090 ORTHO05D006142 1.6e-41 173.3 148 56.1
Duzib116G0889 Durio zibethinus HOM05D005090 ORTHO05D006142 3.5e-41 172.2 146 58.2
MBI16_g23060_MAGBIO Magnolia biondii HOM05D005090 ORTHO05D006142 7.9e-41 171.0 143 58.7
Hund05334 Selenicereus undatus HOM05D005090 ORTHO05D006142 7.9e-41 171.0 176 52.8
Psat6g014640 Pisum sativum HOM05D005090 ORTHO05D006142 1.0e-40 170.6 163 52.1
Thecc.08G002400 Theobroma cacao HOM05D005090 ORTHO05D006142 1.0e-40 170.6 146 58.2
MSTRG.1060 Avicennia marina HOM05D005090 ORTHO05D006142 3.9e-40 168.7 151 57.6
COL.COLO4_10129 Corchorus olitorius HOM05D005090 ORTHO05D006142 6.7e-40 167.9 178 51.1
DCAR_019423 Daucus carota HOM05D005090 ORTHO05D006142 6.7e-40 167.9 175 50.3
Hma1.2p1_0360F.1_g135840 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 1.9e-39 166.4 177 50.3
PSO541G4295 Papaver somniferum HOM05D005090 ORTHO05D006142 1.9e-39 166.4 146 58.2
PSO675G4571 Papaver somniferum HOM05D005090 ORTHO05D006142 2.5e-39 166.0 146 56.8
SalBow7G1773 Salvia bowleyana HOM05D005090 ORTHO05D006142 3.3e-39 165.6 146 54.1
CDE06G1995 Ceratophyllum demersum HOM05D005090 ORTHO05D006142 4.3e-39 165.2 158 53.8
Nn1g04760 Nelumbo nucifera HOM05D005090 ORTHO05D006142 4.8e-38 161.8 151 53.0
Nn5g30374 Nelumbo nucifera HOM05D005090 ORTHO05D006142 6.2e-38 161.4 169 49.1
Cc10_g04780 Coffea canephora HOM05D005090 ORTHO05D006142 8.2e-38 161.0 178 46.6
HanXRQChr04g0103471 Helianthus annuus HOM05D005090 ORTHO05D006142 2.4e-37 159.5 175 46.9
ATR0762G034 Amborella trichopoda HOM05D005090 ORTHO05D006142 3.1e-37 159.1 145 53.8
AUR62038807 Chenopodium quinoa HOM05D005090 ORTHO05D006142 5.3e-37 158.3 140 57.9
Lsat_1_v5_gn_1_22101 Lactuca sativa HOM05D005090 ORTHO05D006142 5.3e-37 158.3 147 54.4
Haze_18058 Corylus avellana HOM05D005090 ORTHO05D006142 6.9e-37 157.9 238 39.9
Haze_18064 Corylus avellana HOM05D005090 ORTHO05D006142 6.9e-37 157.9 124 61.3
BcaB01g00393 Brassica carinata HOM05D005090 ORTHO05D006142 1.2e-36 157.1 103 75.7
Hma1.2p1_0634F.1_g193080 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 1.2e-36 157.1 169 50.9
ECA246G0692 Erigeron canadensis HOM05D005090 ORTHO05D006142 1.5e-36 156.8 172 47.1
Os02g0158600 Oryza sativa ssp. japonica HOM05D005090 ORTHO05D006142 1.7e-35 153.3 139 52.5
HanXRQChr05g0150671 Helianthus annuus HOM05D005090 ORTHO05D006142 4.9e-35 151.8 167 47.3
Manes.05G176500 Manihot esculenta HOM05D005090 ORTHO05D006142 8.4e-35 151.0 124 61.3
Lj4C63T3 Lonicera japonica HOM05D005090 ORTHO05D006142 1.1e-34 150.6 122 59.8
Zm00001eb232600 Zea mays HOM05D005090 ORTHO05D006142 1.9e-34 149.8 149 51.7
Migut.C00536 Erythranthe guttata HOM05D005090 ORTHO05D006142 7.1e-34 147.9 176 49.4
unitig_26.g9810 Utricularia gibba HOM05D005090 ORTHO05D006142 1.6e-33 146.7 167 46.1
MD17G1062600 Malus domestica HOM05D005090 ORTHO05D006142 2.7e-33 146.0 129 58.1
SEGI_34157 Sequoiadendron giganteum HOM05D005090 ORTHO05D006142 2.7e-33 146.0 147 51.0
ECA247G1795 Erigeron canadensis HOM05D005090 ORTHO05D006142 5.1e-32 141.7 134 52.2
SGA_v2.0_scaffold197G41030 Striga asiatica HOM05D005090 ORTHO05D006142 5.1e-32 141.7 204 40.7
EL10As7g23770 Beta vulgaris HOM05D005090 ORTHO05D006142 1.1e-31 140.6 151 50.3
Oeu037620.1 Olea europaea HOM05D005090 ORTHO05D006142 5.7e-31 138.3 120 53.3
Nitab4.5_0012973g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 9.0e-29 131.0 122 51.6
BcaC02g09103 Brassica carinata HOM05D005090 ORTHO05D006142 4.5e-28 128.6 88 77.3
C04p38460 Brassica napus HOM05D005090 ORTHO05D006142 8.5e-27 124.4 88 75.0
Pp3c14_4680 Physcomitrium patens HOM05D005090 ORTHO05D006142 8.5e-27 124.4 151 43.7
Pp3c14_4740 Physcomitrium patens HOM05D005090 ORTHO05D006142 8.5e-27 124.4 151 43.7
BcaC03g17171 Brassica carinata HOM05D005090 ORTHO05D006142 1.4e-26 123.6 88 76.1
BolC2t11185H Brassica oleracea HOM05D005090 ORTHO05D006142 1.4e-26 123.6 88 76.1
Mapoly0121s0046 Marchantia polymorpha HOM05D005090 ORTHO05D006142 5.5e-26 121.7 158 39.9
Pp3c10_3910 Physcomitrium patens HOM05D005090 ORTHO05D006142 7.2e-26 121.3 149 44.3
BolC6t37479H Brassica oleracea HOM05D005090 ORTHO05D006142 9.3e-26 120.9 88 73.9
TAR628G0694 Trochodendron aralioides HOM05D005090 ORTHO05D006142 4.6e-25 118.6 117 54.7
EL10As7g23766 Beta vulgaris HOM05D005090 ORTHO05D006142 7.9e-25 117.9 128 50.0
EL10As7g23771 Beta vulgaris HOM05D005090 ORTHO05D006142 7.9e-25 117.9 128 50.0
CsaV3_4G034590 Cucumis sativus L. HOM05D005090 ORTHO05D006142 7.9e-25 117.9 168 44.0
vmacro04554 Vaccinium macrocarpon HOM05D005090 ORTHO05D006142 1.3e-24 117.1 243 32.1
C02p38970 Brassica napus HOM05D005090 ORTHO05D006142 3.9e-24 115.5 88 70.5
BolC2t09908H Brassica oleracea HOM05D005090 ORTHO05D006142 3.9e-24 115.5 88 70.5
Sc02g0007470 Simmondsia chinensis HOM05D005090 ORTHO05D006142 1.9e-23 113.2 134 42.5
AagrBONN_evm.TU.Sc2ySwM_340.334 Anthoceros agrestis HOM05D005090 ORTHO05D006142 9.7e-23 110.9 140 42.1
Nitab4.5_0005621g0060 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.8e-21 106.7 102 50.0
SMO140G0004 Selaginella moellendorffii HOM05D002426 ORTHO05D002873 2.6e-20 102.8 201 35.3
AUR62044449 Chenopodium quinoa HOM05D005090 ORTHO05D006142 5.9e-20 101.7 114 50.9
EL10As7g23765 Beta vulgaris HOM05D005090 ORTHO05D006142 1.9e-18 96.7 113 47.8
CBR_g12766 Chara braunii HOM05D005090 ORTHO05D006142 2.0e-15 86.7 168 35.1
BcaB04g18128 Brassica carinata HOM05D005090 ORTHO05D006142 8.2e-14 81.3 57 78.9
MD06G1210300 Malus domestica HOM05D005090 ORTHO05D006142 2.2e-11 73.2 62 56.5
Sabra02G0096800 Salix brachista HOM05D005090 ORTHO05D006142 5.7e-07 58.5 48 56.2
Sabra02G0096900 Salix brachista HOM05D005090 ORTHO05D006142 7.4e-07 58.2 79 43.0


User provided reference genes

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