Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 8.5e-201 704.1 564 100.0
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 4.8e-119 432.6 581 70.9
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 8.5e-84 315.5 684 49.0
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 6.1e-82 309.3 550 56.0
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.4e-81 308.1 551 48.8
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 1.1e-80 305.1 627 52.6
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 1.5e-80 304.7 584 58.2
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 2.8e-79 300.4 569 61.0
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 1.1e-78 298.5 547 55.9
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 3.8e-76 290.0 543 55.1
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 1.9e-75 287.7 542 58.1
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 7.2e-75 285.8 587 56.4
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 2.0e-72 277.7 550 53.8
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 1.7e-71 274.6 547 47.3
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 4.5e-69 266.5 543 54.5
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 4.5e-69 266.5 543 54.5
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 7.7e-61 239.2 195 65.6
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 6.5e-60 236.1 203 64.0
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 1.5e-59 235.0 720 44.6
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 3.4e-56 223.8 543 43.8
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 1.4e-54 218.4 553 53.5
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 1.8e-54 218.0 254 53.9
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 5.4e-54 216.5 770 39.5
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 1.0e-52 212.2 598 44.5
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 2.9e-52 210.7 550 47.8
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 5.0e-52 209.9 725 45.0
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.5e-51 208.4 207 56.5
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.0e-49 202.2 551 50.8
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 2.0e-48 198.0 591 46.4
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 9.2e-46 189.1 580 46.0
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 2.3e-44 184.5 206 51.0
AL5G18530 Arabidopsis lyrata HOM05D008352 ORTHO05D011250 1.2e-42 178.7 143 69.9
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 6.8e-41 172.9 202 49.0
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.9e-39 167.5 202 47.5
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 8.3e-39 166.0 195 49.2
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 8.3e-39 166.0 195 49.2
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 1.9e-38 164.9 195 49.2
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 1.9e-38 164.9 195 49.2
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 7.0e-38 162.9 204 46.6
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 7.0e-38 162.9 195 46.7
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.2e-37 162.2 195 50.8
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 2.0e-37 161.4 195 48.7
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 2.7e-37 161.0 195 48.2
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 2.7e-37 161.0 195 48.2
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 2.3e-36 157.9 552 48.6
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 3.9e-36 157.1 193 47.2
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 3.9e-36 157.1 204 46.6
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 5.0e-36 156.8 204 46.1
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 3.3e-35 154.1 185 47.6
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 3.3e-35 154.1 199 45.2
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 4.3e-35 153.7 551 49.7
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 5.2e-33 146.7 174 44.8
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 6.8e-33 146.4 191 46.6
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 6.8e-33 146.4 191 46.6
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 1.2e-32 145.6 188 46.3
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 2.0e-32 144.8 205 42.0
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 2.0e-32 144.8 205 43.4
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.6e-32 144.4 187 42.8
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 2.6e-32 144.4 187 42.8
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 3.4e-32 144.1 207 41.1
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 3.4e-32 144.1 207 41.1
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 2.2e-31 141.4 204 42.6
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.9e-31 141.0 204 41.7
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 1.4e-30 138.7 191 45.0
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 2.4e-30 137.9 194 42.3
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 2.7e-29 134.4 195 40.5
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 2.7e-29 134.4 195 43.6
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 1.3e-28 132.1 148 54.1
Aa31LG2G4400 Aethionema arabicum HOM05D008352 ORTHO05D011361 1.7e-28 131.7 146 56.2
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 1.7e-28 131.7 148 54.7
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 2.3e-28 131.3 148 58.1
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 5.1e-28 130.2 182 44.5
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 6.6e-28 129.8 202 40.6
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 8.6e-28 129.4 202 40.6
Sp1g26250 Schrenkiella parvula HOM05D008352 ORTHO05D011361 1.5e-27 128.6 148 53.4
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 7.3e-27 126.3 148 52.0
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 1.6e-26 125.2 148 54.7
AT3G28810 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 2.8e-26 124.4 178 53.4
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 2.8e-26 124.4 227 36.6
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 4.7e-26 123.6 122 58.2
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 4.7e-26 123.6 207 40.6
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 4.7e-26 123.6 208 38.5
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 4.7e-26 123.6 195 41.0
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 4.7e-26 123.6 195 41.0
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 1.4e-25 122.1 147 54.4
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 1.4e-25 122.1 193 43.5
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 2.3e-25 121.3 191 40.8
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 3.1e-25 120.9 203 40.4
AT3G28820 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 4.0e-25 120.6 178 51.7
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 4.0e-25 120.6 122 57.4
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 6.8e-25 119.8 204 39.7
C07p38160 Brassica napus HOM05D008352 ORTHO05D011361 6.8e-25 119.8 144 52.8
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 1.5e-24 118.6 210 38.1
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 2.6e-24 117.9 189 40.7
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 3.4e-24 117.5 195 39.5
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 3.4e-24 117.5 200 41.0
AL5G18840 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 5.8e-24 116.7 144 54.2
BolC7t44338H Brassica oleracea HOM05D008352 ORTHO05D011361 5.8e-24 116.7 141 53.2
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 7.6e-24 116.3 189 38.1
A06p40010 Brassica napus HOM05D008352 ORTHO05D011361 2.2e-23 114.8 141 52.5
BraA06t26916Z Brassica rapa HOM05D008352 ORTHO05D011361 2.2e-23 114.8 141 52.5
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 2.9e-23 114.4 200 44.5
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 1.1e-22 112.5 184 39.1
BcaB07g32652 Brassica carinata HOM05D008352 ORTHO05D011361 2.4e-22 111.3 149 47.0
BraA09t39127Z Brassica rapa HOM05D008352 ORTHO05D011361 4.1e-22 110.5 149 47.7
A08p24470 Brassica napus HOM05D008352 ORTHO05D011361 5.4e-22 110.2 149 48.3
BraA08t34403Z Brassica rapa HOM05D008352 ORTHO05D011361 5.4e-22 110.2 149 48.3
A09p36020 Brassica napus HOM05D008352 ORTHO05D011361 9.2e-22 109.4 149 47.0
BcaC01g00190 Brassica carinata HOM05D008352 ORTHO05D011361 1.2e-21 109.0 144 47.2
BcaB07g32675 Brassica carinata HOM05D008352 ORTHO05D011361 2.1e-21 108.2 149 47.7
C05p29370 Brassica napus HOM05D008352 ORTHO05D011361 2.1e-21 108.2 149 47.7
BolC5t31669H Brassica oleracea HOM05D008352 ORTHO05D011361 2.1e-21 108.2 149 47.7
C03p76750 Brassica napus HOM05D008352 ORTHO05D011361 7.8e-21 106.3 160 45.6
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 8.6e-20 102.8 197 39.6
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 2.0e-16 91.7 122 42.6
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.6e-16 91.3 119 43.7
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 4.4e-16 90.5 194 36.1
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 4.4e-16 90.5 194 36.1
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 1.7e-15 88.6 194 35.6
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 1.7e-15 88.6 194 35.6
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 1.7e-15 88.6 194 35.6
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 3.8e-15 87.4 176 35.2
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 3.8e-15 87.4 147 40.1
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 4.2e-14 84.0 148 38.5
BcaNung06844 Brassica carinata HOM05D008352 ORTHO05D011361 9.3e-14 82.8 110 47.3
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 1.6e-13 82.0 148 39.9
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 1.6e-13 82.0 148 39.9
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 4.6e-13 80.5 194 35.1
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 4.6e-13 80.5 182 34.6
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 6.0e-13 80.1 143 39.9
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 7.8e-13 79.7 148 38.5
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 1.0e-12 79.3 88 50.0
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 1.0e-12 79.3 88 50.0
BcaB07g30118 Brassica carinata HOM05D011893 ORTHO05D013967 2.3e-12 78.2 148 38.5
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 3.9e-12 77.4 152 36.8
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 8.7e-12 76.3 183 35.5
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 8.7e-12 76.3 183 35.5
AT5G48575 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 1.1e-11 75.9 98 52.0
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 1.9e-11 75.1 150 34.7
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 4.3e-11 73.9 150 34.7
BcaC06g30893 Brassica carinata HOM05D007461 ORTHO05D010345 7.3e-11 73.2 151 31.1
A02p36060 Brassica napus HOM05D011893 ORTHO05D013967 9.6e-11 72.8 148 37.2
BraA02t08605Z Brassica rapa HOM05D011893 ORTHO05D013967 9.6e-11 72.8 148 37.2
SpUn0298_0010 Schrenkiella parvula HOM05D011893 ORTHO05D013967 8.1e-10 69.7 135 37.0
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.1e-09 67.8 584 21.9
BraA02t08642Z Brassica rapa HOM05D008352 ORTHO05D024480 1.2e-08 65.9 112 42.9
Carub.0007s3585 Capsella rubella HOM05D008352 ORTHO05D014403 5.8e-08 63.5 189 27.5
A03p47330 Brassica napus HOM05D007461 ORTHO05D010345 1.1e-06 59.3 61 49.2
Thhalv10009470m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 1.4e-06 58.9 82 50.0
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.4e-06 58.9 576 29.0


User provided reference genes

Program Settings