Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 8.5e-70 266.9 138 100.0
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 4.0e-43 178.3 117 71.8
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 3.4e-42 175.3 117 69.2
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 2.2e-41 172.6 117 71.8
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.4e-40 169.9 117 70.1
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 4.1e-40 168.3 121 69.4
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 9.1e-40 167.2 118 76.3
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 9.1e-40 167.2 118 76.3
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 2.0e-39 166.0 117 70.1
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.0e-39 166.0 117 70.1
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 2.0e-39 166.0 117 70.1
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 2.0e-39 166.0 117 70.1
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 7.7e-39 164.1 118 74.6
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 1.0e-38 163.7 112 77.7
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 3.8e-38 161.8 118 73.7
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 3.8e-38 161.8 112 76.8
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 1.6e-36 156.4 111 75.7
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 7.5e-34 147.5 107 72.0
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 5.2e-27 124.8 117 56.4
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 8.9e-27 124.0 111 57.7
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 2.0e-26 122.9 113 54.9
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 5.7e-26 121.3 117 53.8
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 7.5e-26 120.9 117 53.0
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 3.7e-25 118.6 111 51.4
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 4.9e-25 118.2 113 51.3
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.4e-24 116.7 117 53.0
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 2.4e-24 115.9 117 51.3
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 9.2e-24 114.0 117 47.9
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 2.0e-23 112.8 112 53.6
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 3.9e-22 108.6 128 47.7
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 8.6e-22 107.5 116 46.6
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 1.1e-21 107.1 118 50.8
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 1.1e-21 107.1 118 50.8
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 2.5e-21 105.9 114 50.0
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 3.3e-21 105.5 118 50.0
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 4.3e-21 105.1 116 46.6
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 5.6e-21 104.8 117 48.7
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 1.6e-20 103.2 118 49.2
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 2.1e-20 102.8 117 45.3
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 4.7e-20 101.7 124 45.2
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 6.1e-20 101.3 118 50.8
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 3.1e-19 99.0 117 44.4
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 3.1e-19 99.0 117 44.4
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 3.1e-19 99.0 117 44.4
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 3.1e-19 99.0 117 44.4
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 5.2e-19 98.2 123 43.1
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 8.9e-19 97.4 134 44.0
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-18 97.1 125 44.0
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 1.5e-18 96.7 117 41.9
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 2.6e-18 95.9 105 43.8
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 4.4e-18 95.1 106 46.2
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 4.4e-18 95.1 106 46.2
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 4.4e-18 95.1 112 46.4
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 4.4e-18 95.1 129 38.0
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 5.8e-18 94.7 117 42.7
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 5.8e-18 94.7 117 42.7
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 5.8e-18 94.7 117 42.7
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 5.8e-18 94.7 117 42.7
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 5.8e-18 94.7 117 42.7
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 5.8e-18 94.7 117 42.7
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 5.8e-18 94.7 119 43.7
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 1.7e-17 93.2 98 48.0
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 8.3e-17 90.9 111 47.7
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 3.2e-16 89.0 111 45.9
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 3.2e-16 89.0 111 45.9
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 7.0e-16 87.8 101 47.5
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-15 87.0 101 42.6
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 2.0e-15 86.3 116 41.4
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 2.0e-15 86.3 116 41.4
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 2.7e-15 85.9 111 45.9
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 4.6e-15 85.1 116 41.4
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 4.6e-15 85.1 116 41.4
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 4.6e-15 85.1 116 41.4
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 1.3e-14 83.6 113 43.4
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 6.6e-14 81.3 100 40.0
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 6.6e-14 81.3 100 40.0
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 1.5e-13 80.1 121 41.3
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 2.5e-13 79.3 105 43.8
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 3.3e-13 79.0 122 41.8
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 7.3e-13 77.8 114 44.7
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 1.2e-12 77.0 108 42.6
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 1.2e-12 77.0 108 42.6
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 1.2e-12 77.0 108 42.6
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 2.1e-12 76.3 114 43.9
Aa31LG2G4430 Aethionema arabicum HOM05D007461 ORTHO05D010345 6.2e-12 74.7 133 34.6
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 8.1e-12 74.3 123 39.8
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 8.1e-12 74.3 123 39.8
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 8.1e-12 74.3 123 39.8
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-11 73.9 108 42.6
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 1.8e-11 73.2 108 42.6
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 2.0e-10 69.7 96 37.5
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 2.0e-10 69.7 96 37.5
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 2.6e-10 69.3 100 37.0
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 2.6e-10 69.3 114 41.2
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 3.4e-10 68.9 119 35.3
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 5.8e-10 68.2 108 39.8
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.2e-09 66.2 98 39.8
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 8.3e-09 64.3 96 36.5
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 9.2e-08 60.8 113 31.9
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.2e-07 60.5 128 31.2
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.0e-06 57.4 122 30.3
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.3e-06 57.0 122 30.3
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.3e-06 57.0 122 30.3
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 2.3e-06 56.2 112 26.8
Carub.0007s3585 Capsella rubella HOM05D008352 ORTHO05D014403 3.0e-06 55.8 112 29.5
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 8.6e-06 54.3 87 32.2


User provided reference genes

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