Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g17420 Schrenkiella parvula HOM05D011893 ORTHO05D013967 8.5e-287 991.1 1375 100.0
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 6.8e-119 433.3 561 57.8
BcaB07g30118 Brassica carinata HOM05D011893 ORTHO05D013967 3.5e-107 394.4 440 60.9
Thhalv10005404m.g Eutrema salsugineum HOM05D011893 ORTHO05D013967 5.6e-105 387.1 500 57.4
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 2.1e-99 368.6 505 58.8
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 2.7e-99 368.2 505 57.4
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 9.9e-86 323.2 599 43.1
A02p36060 Brassica napus HOM05D011893 ORTHO05D013967 1.2e-78 299.7 509 56.8
BraA02t08605Z Brassica rapa HOM05D011893 ORTHO05D013967 1.2e-78 299.7 509 56.8
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 1.3e-74 286.2 252 65.1
Aa31LG2G4450 Aethionema arabicum HOM05D011893 ORTHO05D013967 8.7e-58 230.3 251 57.8
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 9.1e-47 193.7 259 46.7
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 2.8e-40 172.2 432 47.5
THA.LOC104823936 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 2.0e-14 86.3 188 32.4
THA.LOC104823935 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 3.5e-14 85.5 190 30.0
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 4.5e-14 85.1 192 30.2
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 5.9e-14 84.7 194 30.4
Aa31LG2G4400 Aethionema arabicum HOM05D008352 ORTHO05D011361 1.7e-13 83.2 188 29.3
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 2.9e-13 82.4 191 29.3
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 3.8e-13 82.0 190 31.6
AT3G28810 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 8.6e-13 80.9 184 28.8
AT3G28820 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 3.3e-12 79.0 183 29.0
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 5.6e-12 78.2 208 27.9
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 5.6e-12 78.2 250 26.4
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 7.3e-12 77.8 208 27.4
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 7.3e-12 77.8 208 27.4
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 1.2e-11 77.0 197 27.9
AL5G18840 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 1.6e-11 76.6 207 27.5
SpUn0298_0010 Schrenkiella parvula HOM05D011893 ORTHO05D013967 2.1e-11 76.3 158 28.5
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 2.8e-11 75.9 223 30.0
Carub.0007s3585 Capsella rubella HOM05D008352 ORTHO05D014403 3.0e-10 72.4 213 27.7
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 6.8e-10 71.2 157 26.1
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 3.4e-09 68.9 187 26.7
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 3.4e-09 68.9 207 28.5
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 4.4e-09 68.6 218 27.1
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 2.2e-08 66.2 248 25.4
A08p24470 Brassica napus HOM05D008352 ORTHO05D011361 8.3e-08 64.3 210 24.8
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 1.1e-07 63.9 208 24.5
A04p12630 Brassica napus HOM05D008352 ORTHO05D014403 1.4e-07 63.5 205 25.4
BraA04t16920Z Brassica rapa HOM05D008352 ORTHO05D014403 1.4e-07 63.5 205 25.4
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 2.4e-07 62.8 258 25.6
C05p29370 Brassica napus HOM05D008352 ORTHO05D011361 2.4e-07 62.8 209 24.9
BolC5t31669H Brassica oleracea HOM05D008352 ORTHO05D011361 2.4e-07 62.8 209 24.9
BraA08t34403Z Brassica rapa HOM05D008352 ORTHO05D011361 2.4e-07 62.8 210 24.3
BcaB07g32675 Brassica carinata HOM05D008352 ORTHO05D011361 3.2e-07 62.4 209 24.9
BcaB06g27386 Brassica carinata HOM05D008352 ORTHO05D014403 5.4e-07 61.6 218 26.6
C04p46350 Brassica napus HOM05D008352 ORTHO05D014403 7.0e-07 61.2 211 25.6
BolC4t26221H Brassica oleracea HOM05D008352 ORTHO05D014403 7.0e-07 61.2 211 25.6
A09p36020 Brassica napus HOM05D008352 ORTHO05D011361 9.2e-07 60.8 207 25.6
BraA09t39127Z Brassica rapa HOM05D008352 ORTHO05D011361 9.2e-07 60.8 207 25.6


User provided reference genes

Program Settings