Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 1.7e-169 599.4 318 100.0
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 2.2e-158 562.4 318 94.0
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 4.4e-154 548.1 321 91.6
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 4.4e-154 548.1 321 91.6
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 4.5e-151 538.1 321 86.6
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.0e-150 537.0 319 91.2
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 1.5e-149 533.1 320 91.2
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 2.5e-149 532.3 320 91.2
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 3.3e-149 531.9 314 91.4
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 2.1e-148 529.3 320 85.6
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 3.4e-130 468.8 292 82.5
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 6.4e-129 464.5 320 73.4
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 3.1e-123 445.7 279 83.9
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 1.2e-111 407.1 324 67.0
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 3.5e-111 405.6 317 68.8
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 2.8e-108 396.0 321 66.0
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 2.4e-107 392.9 324 66.0
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 2.0e-106 389.8 311 66.2
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 2.6e-106 389.4 312 66.7
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 4.4e-106 388.7 320 65.3
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 7.6e-106 387.9 319 64.6
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 7.6e-106 387.9 320 65.0
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 7.6e-106 387.9 320 65.3
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 1.7e-105 386.7 299 65.9
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 2.2e-105 386.3 312 65.4
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 4.9e-105 385.2 322 63.7
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 4.9e-105 385.2 313 63.6
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 1.9e-104 383.3 303 65.7
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 3.2e-104 382.5 317 62.8
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 2.1e-103 379.8 321 62.6
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 4.6e-103 378.6 319 62.7
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 1.7e-102 376.7 294 65.3
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 2.3e-102 376.3 316 63.0
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 3.9e-102 375.6 283 67.5
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 3.9e-102 375.6 255 72.5
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 5.1e-102 375.2 276 69.6
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 5.1e-102 375.2 306 64.4
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.7e-102 374.4 287 67.2
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 1.9e-101 373.2 320 62.8
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 5.6e-101 371.7 319 62.4
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 7.3e-101 371.3 312 63.8
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 7.3e-101 371.3 273 68.1
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 1.6e-100 370.2 318 61.9
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 2.8e-100 369.4 325 62.5
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 6.2e-100 368.2 275 67.6
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 6.2e-100 368.2 275 67.6
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 1.4e-99 367.1 320 62.2
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 1.4e-99 367.1 320 65.3
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.8e-99 366.7 315 63.5
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.8e-99 366.7 270 67.0
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 2.4e-99 366.3 270 67.0
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 3.1e-99 365.9 311 62.1
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 6.9e-99 364.8 264 74.6
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 6.9e-99 364.8 255 71.0
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 9.0e-99 364.4 316 61.4
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.2e-98 364.0 315 61.3
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 1.2e-98 364.0 271 66.8
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 1.5e-98 363.6 319 67.1
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 2.0e-98 363.2 273 67.4
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.0e-98 363.2 318 60.7
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 5.8e-98 361.7 316 61.7
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.2e-97 359.8 315 61.0
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.8e-97 359.0 315 61.0
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 3.8e-97 359.0 276 67.4
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 4.9e-97 358.6 276 65.6
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 1.1e-96 357.5 266 65.8
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 3.2e-96 355.9 313 59.7
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 7.1e-96 354.8 319 60.5
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 1.2e-95 354.0 294 63.3
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 1.2e-95 354.0 277 65.0
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 1.2e-95 354.0 318 59.7
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.6e-95 353.6 324 63.3
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 3.5e-95 352.4 319 60.5
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 1.3e-94 350.5 312 59.3
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 5.1e-94 348.6 250 70.0
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 8.7e-94 347.8 291 62.9
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 1.9e-93 346.7 296 63.2
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 4.3e-93 345.5 211 77.3
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 4.3e-93 345.5 257 68.9
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 1.6e-92 343.6 255 67.8
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 2.1e-92 343.2 295 62.7
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 4.8e-92 342.0 272 64.0
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 4.0e-91 339.0 266 70.7
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 6.0e-87 325.1 260 62.3
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.0e-86 322.8 212 75.5
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 8.7e-86 321.2 300 58.7
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 1.5e-85 320.5 292 56.5
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 4.3e-85 318.9 297 58.6
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 7.4e-85 318.2 197 78.2
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 1.6e-84 317.0 293 61.1
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.1e-83 314.3 210 74.8
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 5.3e-83 312.0 263 60.5
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 5.8e-82 308.5 292 56.2
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.8e-78 297.0 176 79.5
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 3.9e-78 295.8 273 60.4
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 8.7e-78 294.7 176 83.0
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 1.7e-73 280.4 159 81.1
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 2.2e-73 280.0 225 64.0
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 3.3e-69 266.2 210 62.9
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 4.8e-68 262.3 180 72.8
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 3.6e-63 246.1 204 57.8
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 3.9e-62 242.7 209 58.9
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 8.8e-62 241.5 196 61.7
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 2.6e-61 240.0 217 59.0
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 4.4e-61 239.2 212 59.9
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 2.4e-59 233.4 209 56.9
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 2.7e-55 219.9 186 71.0
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 1.2e-50 204.5 206 51.9
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 8.3e-44 181.8 162 54.3
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 1.5e-40 171.0 200 43.0
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 9.4e-40 168.3 123 61.8
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 3.6e-39 166.4 208 41.8
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 6.8e-30 135.6 120 55.0
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 2.0e-29 134.0 85 72.9
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.7e-28 131.0 96 67.7
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 6.3e-28 129.0 86 75.6
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 8.9e-22 108.6 60 88.3
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 7.0e-19 99.0 68 76.5
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 4.6e-10 69.7 37 86.5
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 9.5e-08 62.0 123 39.0


User provided reference genes

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