Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 3.6e-114 415.2 258 100.0
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 4.3e-91 338.6 261 84.7
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 5.6e-91 338.2 262 84.4
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 1.1e-89 334.0 283 77.7
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 3.4e-88 328.9 257 84.0
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 4.4e-88 328.6 262 83.6
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 1.2e-82 310.5 262 80.5
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 1.4e-70 270.4 270 70.7
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.2e-64 250.8 217 80.6
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.3e-63 247.3 218 73.4
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 3.2e-62 242.7 217 78.8
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 1.6e-53 213.8 217 69.6
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 3.0e-52 209.5 217 72.4
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 6.3e-50 201.8 258 60.9
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 5.9e-48 195.3 258 45.7
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 5.0e-47 192.2 256 44.5
BraA06t26977Z Brassica rapa HOM05D007214 ORTHO05D008907 5.5e-46 188.7 219 69.4
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 8.7e-44 181.4 263 42.2
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 7.4e-43 178.3 217 58.1
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 5.5e-38 162.2 259 38.6
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 1.2e-32 144.4 223 46.6
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 2.0e-32 143.7 222 41.9
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 2.6e-32 143.3 218 53.7
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 1.0e-31 141.4 285 35.1
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.7e-31 140.6 221 38.9
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.2e-31 140.2 284 36.3
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 2.9e-31 139.8 223 38.6
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 5.5e-30 135.6 253 43.9
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 9.4e-30 134.8 274 34.3
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 7.9e-29 131.7 280 38.2
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 1.0e-28 131.3 265 44.2
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.1e-27 127.9 260 35.8
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 9.7e-27 124.8 297 33.0
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 1.7e-26 124.0 303 32.7
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 6.3e-26 122.1 224 50.0
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 8.2e-26 121.7 258 33.3
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 1.2e-24 117.9 210 37.6
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 3.5e-24 116.3 252 33.7
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 5.9e-24 115.5 213 33.8
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 7.7e-24 115.2 215 34.0
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 2.2e-23 113.6 258 41.9
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 1.1e-22 111.3 231 36.8
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 9.4e-22 108.2 217 38.7
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 1.2e-21 107.8 221 34.4
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 2.7e-21 106.7 264 42.4
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 2.7e-21 106.7 224 32.6
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 8.0e-21 105.1 225 38.7
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 8.0e-21 105.1 124 45.2
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 1.0e-20 104.8 221 34.4
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 4.0e-20 102.8 257 31.5
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 5.2e-20 102.4 219 32.9
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 2.0e-19 100.5 145 41.4
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 2.0e-19 100.5 189 51.9
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 2.0e-19 100.5 221 33.5
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 7.5e-19 98.6 215 32.1
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.3e-18 97.8 224 45.5
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 6.3e-18 95.5 221 39.4
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 8.2e-18 95.1 220 37.7
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 2.4e-17 93.6 224 46.9
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 3.1e-17 93.2 220 44.1
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 1.6e-16 90.9 225 36.4
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 4.5e-16 89.4 128 48.4
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 1.0e-15 88.2 256 38.7
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 2.2e-15 87.0 188 45.7
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 5.0e-15 85.9 223 43.5
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 9.4e-14 81.6 218 30.7
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 2.1e-13 80.5 112 42.0
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 2.1e-13 80.5 222 42.3
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 4.7e-13 79.3 218 35.8
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 4.7e-13 79.3 260 34.2
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 5.2e-12 75.9 134 38.8
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 4.4e-11 72.8 205 44.4
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 4.4e-11 72.8 124 37.9
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 7.5e-11 72.0 220 34.5
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 1.7e-10 70.9 215 35.8
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 1.7e-10 70.9 208 42.3
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 1.7e-10 70.9 196 36.2
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 2.2e-10 70.5 230 34.3
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 3.7e-10 69.7 223 38.1
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 4.8e-10 69.3 74 50.0
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 1.4e-09 67.8 107 39.3
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 1.8e-09 67.4 262 27.1
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 3.1e-09 66.6 102 35.3
AT1G51430 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 5.4e-09 65.9 171 36.8
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 9.1e-09 65.1 224 28.6
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 1.6e-08 64.3 120 37.5
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 5.9e-08 62.4 129 32.6
Psat3g176600 Pisum sativum HOM05D007214 ORTHO05D008907 5.0e-07 59.3 99 40.4
BolC7t44254H Brassica oleracea HOM05D007214 ORTHO05D008907 1.5e-06 57.8 30 90.0
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 1.9e-06 57.4 232 29.7
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 1.9e-06 57.4 79 35.4
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 2.5e-06 57.0 79 59.5
MELO3C030968.2 Cucumis melo HOM05D007214 ORTHO05D008907 3.2e-06 56.6 92 31.5
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 4.2e-06 56.2 215 27.9
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 4.2e-06 56.2 119 35.3


User provided reference genes

Program Settings