Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 4.6e-302 1040.4 518 100.0
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 3.3e-252 874.8 527 84.4
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 1.8e-237 825.9 525 80.4
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 1.4e-234 816.2 522 79.5
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 7.0e-226 787.3 519 79.2
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 8.0e-222 773.9 520 77.9
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 8.8e-221 770.4 520 77.7
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 1.5e-220 769.6 520 77.7
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 1.3e-219 766.5 522 77.4
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 1.3e-219 766.5 522 77.4
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 1.7e-216 756.1 521 74.7
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 4.9e-195 684.9 519 70.7
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 9.0e-173 610.9 561 61.1
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.4e-165 587.0 390 77.9
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 4.5e-140 502.3 583 47.7
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.5e-132 477.2 567 48.0
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 2.0e-132 476.9 567 48.1
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 1.9e-130 470.3 577 47.0
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 2.5e-130 469.9 557 48.8
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 1.4e-128 464.2 569 48.0
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 1.4e-125 454.1 535 48.0
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 8.5e-123 444.9 566 43.5
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 1.1e-122 444.5 575 45.7
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.9e-122 443.7 584 44.2
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 4.2e-122 442.6 578 44.8
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 5.5e-122 442.2 585 43.6
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 2.1e-121 440.3 562 46.1
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 2.3e-120 436.8 588 45.4
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 3.0e-120 436.4 590 44.6
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 5.2e-120 435.6 577 45.2
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 8.8e-120 434.9 577 45.2
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 8.8e-120 434.9 579 45.1
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.2e-119 434.5 575 45.2
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 2.6e-119 433.3 570 44.7
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 3.3e-119 433.0 563 44.4
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 1.7e-118 430.6 567 44.6
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.7e-118 430.6 578 43.8
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.7e-118 429.5 600 42.7
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 4.8e-118 429.1 581 44.9
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.1e-117 427.9 566 45.1
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 1.1e-117 427.9 601 43.8
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 3.1e-117 426.4 569 43.9
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.6e-116 424.1 603 42.5
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 3.5e-116 422.9 524 43.7
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 5.0e-115 419.1 608 43.1
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 1.6e-113 414.1 526 45.8
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 4.0e-112 409.5 524 43.9
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 2.6e-111 406.8 524 44.8
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 5.7e-111 405.6 590 39.7
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 1.3e-110 404.4 547 44.1
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 3.7e-110 402.9 569 42.0
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 1.1e-109 401.4 585 41.0
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 5.4e-109 399.1 519 44.1
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 7.0e-109 398.7 543 40.5
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 3.5e-108 396.4 551 44.5
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 4.5e-108 396.0 568 41.5
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 1.3e-107 394.4 581 42.2
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 1.1e-106 391.3 564 41.5
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 2.5e-106 390.2 564 41.3
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 1.6e-105 387.5 530 41.3
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 1.8e-104 384.0 587 40.4
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 2.3e-104 383.6 584 40.4
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 5.2e-104 382.5 553 42.3
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 6.8e-104 382.1 570 40.2
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 8.8e-104 381.7 582 40.9
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 9.8e-103 378.3 582 39.5
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 1.7e-102 377.5 555 41.8
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 8.3e-102 375.2 562 40.2
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 1.4e-101 374.4 565 39.3
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 2.4e-101 373.6 524 42.2
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 4.1e-101 372.9 568 40.0
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.2e-100 371.3 520 41.3
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 2.0e-100 370.5 557 39.0
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 2.7e-100 370.2 561 39.6
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 7.8e-100 368.6 563 40.5
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.7e-99 367.5 585 37.9
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 2.9e-99 366.7 554 41.7
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 2.1e-97 360.5 566 40.3
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 4.7e-97 359.4 548 38.3
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 6.1e-97 359.0 544 37.7
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 2.0e-95 354.0 544 37.1
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 2.6e-95 353.6 609 36.3
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 1.8e-93 347.4 546 39.2
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 5.4e-93 345.9 573 36.1
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 8.6e-91 338.6 600 36.0
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 2.8e-89 333.6 442 44.1
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 3.4e-87 326.6 530 37.5
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 1.1e-85 321.6 586 36.3
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 5.4e-77 292.7 530 34.9
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 4.6e-76 289.7 524 36.6
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.9e-74 284.3 394 43.4
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 3.3e-74 283.5 401 40.4
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 1.1e-72 278.5 409 43.3
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 6.4e-70 269.2 555 33.0
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 1.9e-66 257.7 410 38.3
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 4.7e-65 253.1 366 41.8
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 5.2e-64 249.6 443 35.9
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 6.9e-64 249.2 374 45.5
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 1.7e-62 244.6 348 44.0
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 9.0e-56 222.2 219 53.0
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 3.0e-51 207.2 478 31.0
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.1e-45 188.7 214 43.0
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 2.1e-44 184.5 551 27.0
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 6.9e-40 169.5 191 45.5
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 5.7e-34 149.8 544 25.6
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 2.6e-31 141.0 170 45.3
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 4.5e-31 140.2 414 25.8
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 1.3e-30 138.7 136 51.5
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 8.2e-25 119.4 360 27.8
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.3e-22 112.1 140 42.9
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 6.5e-22 109.8 159 43.4
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 5.5e-21 106.7 138 43.5
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.0e-19 102.4 134 44.0
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 8.0e-12 76.3 87 47.1
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 1.1e-10 72.4 119 30.3
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 9.7e-10 69.3 78 43.6
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 2.0e-07 61.6 43 60.5


User provided reference genes

Program Settings