Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 6.8e-148 527.3 271 100.0
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.9e-138 495.4 271 94.1
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 2.5e-134 482.3 271 92.3
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 1.2e-133 479.9 271 90.4
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 4.7e-133 478.0 271 91.9
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 4.7e-133 478.0 271 91.9
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 3.4e-131 471.9 274 90.9
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 2.9e-130 468.8 271 91.1
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 6.4e-130 467.6 271 91.1
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 3.3e-126 455.3 271 89.7
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 1.3e-125 453.4 271 88.2
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.6e-125 453.0 271 88.2
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 5.3e-124 448.0 270 87.4
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 4.9e-122 441.4 272 87.9
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 7.9e-112 407.5 275 81.1
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 2.4e-108 396.0 233 90.1
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.1e-100 370.5 272 72.4
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.0e-99 366.3 275 73.5
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 2.7e-88 329.3 227 77.1
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 2.7e-88 329.3 216 80.1
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 7.9e-88 327.8 234 75.6
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.8e-87 326.6 235 77.0
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 3.0e-87 325.9 273 67.0
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 6.7e-87 324.7 210 81.0
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 2.0e-86 323.2 201 84.1
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 2.0e-86 323.2 203 82.3
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 5.7e-86 321.6 201 83.6
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 5.7e-86 321.6 218 78.4
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 5.7e-86 321.6 233 73.0
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 5.7e-86 321.6 213 79.3
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 7.4e-86 321.2 234 74.4
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.3e-85 320.5 215 77.2
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 1.7e-85 320.1 216 78.2
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.7e-85 320.1 270 65.9
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.8e-85 319.3 215 77.7
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.8e-85 319.3 219 77.2
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 3.7e-85 318.9 247 71.7
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 3.7e-85 318.9 219 77.2
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 3.7e-85 318.9 219 77.2
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 4.8e-85 318.5 203 80.3
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 8.2e-85 317.8 218 74.3
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 1.8e-84 316.6 271 66.1
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 1.8e-84 316.6 233 72.5
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.8e-84 316.6 220 75.9
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 3.1e-84 315.8 277 65.0
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 3.1e-84 315.8 243 69.1
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 3.1e-84 315.8 262 65.6
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 4.1e-84 315.5 229 73.4
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 4.1e-84 315.5 283 65.0
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 5.3e-84 315.1 272 64.7
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 7.0e-84 314.7 234 73.5
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 9.1e-84 314.3 234 70.5
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 1.2e-83 313.9 215 75.3
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 1.5e-83 313.5 204 79.4
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 2.0e-83 313.2 215 76.3
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.0e-83 313.2 266 67.7
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 2.0e-83 313.2 190 83.2
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.0e-83 313.2 273 65.2
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 2.0e-83 313.2 269 64.7
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.4e-83 312.4 234 73.1
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 3.4e-83 312.4 259 65.6
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 4.5e-83 312.0 240 70.8
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 5.9e-83 311.6 195 82.6
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 5.9e-83 311.6 271 64.9
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 7.7e-83 311.2 276 64.9
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 7.7e-83 311.2 282 62.4
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 1.0e-82 310.8 200 80.0
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.0e-82 310.8 241 70.1
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 1.3e-82 310.5 198 78.3
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.7e-82 310.1 188 82.4
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.7e-82 310.1 271 66.8
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.2e-82 309.7 204 77.0
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 2.9e-82 309.3 233 69.5
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 3.8e-82 308.9 282 62.4
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 5.0e-82 308.5 244 68.4
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 5.0e-82 308.5 200 80.5
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 6.5e-82 308.1 277 61.7
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.1e-81 307.4 193 81.9
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 1.4e-81 307.0 200 79.5
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 2.5e-81 306.2 205 77.1
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 3.2e-81 305.8 271 63.8
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 4.2e-81 305.4 188 82.4
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 7.2e-81 304.7 203 77.8
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 7.2e-81 304.7 272 64.7
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.6e-80 303.5 271 63.5
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 2.1e-80 303.1 234 67.5
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 2.1e-80 303.1 198 79.3
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 2.7e-80 302.8 266 64.3
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 3.6e-80 302.4 271 62.7
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 6.1e-80 301.6 198 79.3
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 6.1e-80 301.6 199 77.4
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.8e-79 300.1 188 81.9
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 3.0e-79 299.3 226 70.8
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 8.8e-79 297.7 188 79.8
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 4.4e-78 295.4 227 70.0
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 2.2e-77 293.1 193 75.6
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.4e-76 290.4 203 76.4
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 4.1e-76 288.9 197 75.1
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 2.6e-75 286.2 223 70.4
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 4.0e-71 272.3 236 64.0
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.8e-69 266.2 215 62.3
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 1.4e-68 263.8 275 58.2
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.0e-67 260.0 201 72.1
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 8.0e-64 248.1 192 64.6
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 1.3e-61 240.7 220 56.8
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 5.4e-60 235.3 197 58.4
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 5.2e-55 218.8 173 71.1
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 9.8e-54 214.5 154 76.0
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.8e-52 210.3 127 83.5
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 9.2e-52 208.0 274 48.9
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 3.7e-45 186.0 193 50.8
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 7.0e-44 181.8 108 83.3
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.6e-43 180.6 184 50.0
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 6.0e-43 178.7 182 55.5
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 1.3e-42 177.6 193 56.5
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 3.2e-36 156.4 264 38.6
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 4.1e-36 156.0 108 66.7
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 8.3e-29 131.7 121 64.5
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 3.1e-23 113.2 84 65.5
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.5e-22 110.9 73 80.8
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 7.8e-19 98.6 95 62.1
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 9.0e-15 85.1 48 81.2
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 4.4e-14 82.8 46 93.5
BcaB01g05146 Brassica carinata HOM05D039718 ORTHO05D031954 1.7e-13 80.9 105 49.5
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 3.2e-12 76.6 67 64.2


User provided reference genes

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