Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.9e-167 592.4 306 100.0
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 2.0e-140 502.7 306 85.9
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 9.1e-133 477.2 308 82.5
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 6.1e-129 464.5 309 80.6
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 8.0e-129 464.2 309 80.9
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.6e-124 449.9 303 79.2
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 3.5e-124 448.7 309 79.9
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 1.0e-123 447.2 311 79.7
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.0e-123 447.2 308 79.5
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 2.9e-123 445.7 303 79.2
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 2.6e-119 432.6 266 85.3
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 6.4e-118 427.9 293 79.2
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 9.5e-114 414.1 288 77.8
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 3.8e-94 349.0 315 60.6
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.1e-89 333.2 330 63.3
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 2.4e-85 319.7 277 58.1
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.9e-82 310.1 312 51.6
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 5.6e-82 308.5 300 53.3
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 7.3e-82 308.1 299 53.2
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.4e-80 303.9 287 55.4
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 5.3e-80 302.0 296 52.7
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 9.0e-80 301.2 266 57.9
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.2e-79 300.8 266 57.9
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.6e-79 299.7 272 57.4
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 4.5e-79 298.9 296 52.4
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 7.6e-79 298.1 261 59.0
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.3e-78 297.4 261 58.6
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.7e-78 297.0 261 56.7
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.7e-78 297.0 257 58.4
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 8.4e-78 294.7 260 59.6
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 2.4e-77 293.1 254 58.3
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 4.2e-77 292.4 269 57.2
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.2e-76 290.8 265 55.1
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 2.1e-76 290.0 190 71.1
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 2.7e-76 289.7 257 57.6
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 2.7e-76 289.7 257 58.0
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 3.5e-76 289.3 252 58.7
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.9e-75 285.8 260 56.5
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 3.9e-75 285.8 286 52.8
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 6.7e-75 285.0 254 58.3
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 8.7e-75 284.6 260 55.8
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.1e-74 284.3 261 55.6
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 3.3e-74 282.7 270 55.6
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 3.3e-74 282.7 190 68.9
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.3e-74 282.7 260 56.2
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 5.6e-74 282.0 254 57.5
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 2.1e-73 280.0 261 55.6
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 1.8e-72 276.9 260 56.9
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 3.1e-72 276.2 266 52.6
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 4.0e-72 275.8 255 55.7
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 5.3e-72 275.4 258 54.7
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 9.0e-72 274.6 283 49.5
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 1.2e-71 274.2 282 53.5
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.5e-71 273.9 192 67.7
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 2.0e-71 273.5 192 67.2
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.0e-71 273.5 267 53.2
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 3.4e-71 272.7 194 66.5
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 3.4e-71 272.7 235 60.4
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 5.8e-71 271.9 256 53.5
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 5.8e-71 271.9 255 55.7
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 2.2e-70 270.0 265 51.3
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.4e-69 267.3 305 47.9
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 1.4e-69 267.3 189 65.6
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 3.5e-68 262.7 312 47.4
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 7.9e-68 261.5 297 47.5
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 1.0e-67 261.2 253 54.9
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 3.9e-67 259.2 309 46.9
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 5.1e-67 258.8 192 63.5
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 4.0e-64 249.2 201 60.7
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 1.2e-63 247.7 268 51.1
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.0e-63 246.9 269 51.3
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 7.6e-63 245.0 303 47.5
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 8.4e-62 241.5 276 48.9
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 7.1e-61 238.4 244 51.2
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 3.5e-60 236.1 258 47.3
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 4.3e-58 229.2 245 49.8
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 3.7e-57 226.1 259 49.0
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 4.1e-56 222.6 251 48.6
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 6.9e-56 221.9 190 58.9
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 2.6e-55 219.9 259 49.0
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 5.9e-55 218.8 415 38.6
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 7.7e-55 218.4 223 52.5
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 6.5e-54 215.3 286 45.1
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 6.5e-54 215.3 142 69.7
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 3.2e-53 213.0 220 50.9
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 6.1e-52 208.8 221 48.9
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 2.0e-50 203.8 244 42.2
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 4.1e-48 196.1 261 39.8
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 3.4e-47 193.0 258 43.4
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 1.5e-39 167.5 254 39.4
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 7.0e-32 142.1 94 67.0
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 1.7e-30 137.5 176 46.0
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 1.6e-28 131.0 168 42.9
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 1.4e-27 127.9 176 38.6
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 6.8e-27 125.6 230 31.7
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.5e-26 124.4 102 55.9
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 2.2e-25 120.6 167 43.7
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 1.3e-22 111.3 238 30.7
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 8.0e-20 102.1 177 38.4
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 2.3e-19 100.5 117 41.9
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.7e-17 94.4 162 37.0
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 1.4e-16 91.3 62 64.5
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 3.1e-16 90.1 140 44.3
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 3.5e-15 86.7 90 47.8


User provided reference genes

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