Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 7.6e-144 513.8 265 100.0
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 1.6e-138 496.1 265 95.8
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.1e-131 473.4 268 90.7
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 3.3e-131 471.9 266 90.2
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 5.7e-131 471.1 268 91.0
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 4.8e-122 441.4 273 83.5
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.4e-121 439.9 269 84.4
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.4e-121 439.9 269 84.4
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 2.4e-121 439.1 267 82.8
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 4.1e-121 438.3 267 85.4
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 2.6e-120 435.6 271 82.7
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 2.6e-120 435.6 271 82.7
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 2.2e-119 432.6 268 83.6
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 4.4e-107 391.7 270 76.3
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 6.3e-106 387.9 272 73.2
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 1.8e-105 386.3 270 75.6
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 2.7e-88 329.3 274 63.5
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 8.6e-87 324.3 268 63.4
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 8.6e-87 324.3 268 63.4
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 1.1e-86 323.9 274 61.7
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 7.3e-86 321.2 276 63.0
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.0e-84 317.4 274 61.7
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.0e-84 317.4 274 61.3
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 5.2e-84 315.1 274 60.9
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.2e-83 313.9 275 60.4
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 2.6e-83 312.8 267 61.8
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 4.4e-83 312.0 266 60.5
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 5.8e-83 311.6 268 61.2
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 8.3e-82 307.8 258 60.9
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.4e-81 307.0 274 58.8
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 2.4e-81 306.2 269 58.4
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 3.2e-81 305.8 256 62.5
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 3.2e-81 305.8 274 58.4
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 3.2e-81 305.8 269 59.5
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 1.6e-80 303.5 194 84.0
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.6e-80 303.5 275 57.5
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 2.0e-80 303.1 274 59.9
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 3.5e-80 302.4 194 83.0
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 6.0e-80 301.6 267 60.7
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 1.3e-79 300.4 276 56.5
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 3.0e-79 299.3 274 59.1
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 1.9e-78 296.6 275 57.1
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 2.5e-78 296.2 276 56.5
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 5.6e-78 295.0 268 59.0
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 6.2e-77 291.6 275 57.1
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.4e-76 290.4 275 55.3
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.4e-76 290.4 273 57.5
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 1.8e-76 290.0 275 56.4
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 3.1e-76 289.3 274 56.9
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 5.2e-76 288.5 273 57.1
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 8.9e-76 287.7 276 56.2
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 2.0e-75 286.6 274 56.2
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 2.0e-75 286.6 274 55.8
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 4.4e-75 285.4 244 59.8
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 5.8e-75 285.0 273 56.8
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 1.3e-74 283.9 269 57.2
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.7e-74 283.5 270 55.2
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 6.4e-74 281.6 268 57.1
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.4e-73 280.4 270 54.8
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 4.1e-73 278.9 275 55.6
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 4.1e-73 278.9 240 59.6
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 1.6e-72 276.9 269 55.8
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 6.0e-72 275.0 270 55.2
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 1.0e-71 274.2 238 58.4
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 1.3e-71 273.9 274 53.3
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 3.9e-71 272.3 272 52.6
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 6.6e-71 271.6 268 54.5
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.5e-70 270.4 267 54.3
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.9e-70 270.0 268 53.0
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 2.5e-70 269.6 272 54.4
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 3.3e-70 269.2 271 54.6
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 5.6e-70 268.5 273 54.2
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 7.3e-70 268.1 274 53.6
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 7.3e-70 268.1 273 54.2
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 9.5e-70 267.7 274 53.6
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 1.1e-68 264.2 274 53.6
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 1.4e-68 263.8 272 54.0
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 1.4e-68 263.8 272 54.0
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 3.1e-68 262.7 268 53.7
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 6.8e-68 261.5 242 57.0
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 1.5e-67 260.4 260 53.5
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.4e-65 253.8 267 51.7
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 1.0e-63 247.7 233 55.4
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 2.3e-63 246.5 213 58.2
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 1.7e-58 230.3 217 56.2
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 1.7e-58 230.3 268 51.5
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 5.1e-55 218.8 232 53.0
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 2.8e-53 213.0 269 44.6
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 8.1e-53 211.5 191 57.6
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.8e-52 210.3 230 48.3
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 7.6e-51 204.9 269 45.4
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 9.3e-49 198.0 270 44.1
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 2.7e-48 196.4 270 44.8
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 6.0e-48 195.3 274 40.9
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 1.7e-47 193.7 268 42.2
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 5.1e-47 192.2 269 43.5
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 5.1e-47 192.2 269 43.5
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 1.6e-45 187.2 271 45.0
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 6.9e-44 181.8 237 42.6
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 9.0e-44 181.4 256 41.0
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 2.6e-43 179.9 271 43.5
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 5.8e-43 178.7 232 44.8
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 7.6e-43 178.3 218 49.5
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 2.4e-41 173.3 241 43.2
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.6e-40 169.1 91 92.3
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 5.3e-36 155.6 236 36.9
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 1.3e-34 151.0 270 37.4
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 9.3e-33 144.8 235 39.6
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 3.0e-31 139.8 218 39.4
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 3.7e-29 132.9 239 37.2
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 3.1e-28 129.8 272 32.4
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 1.0e-23 114.8 151 44.4
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 3.9e-23 112.8 221 35.7
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 1.3e-21 107.8 237 32.1
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 3.8e-18 96.3 106 45.3
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 5.1e-15 85.9 118 41.5
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 1.1e-14 84.7 92 47.8
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 1.5e-14 84.3 104 47.1
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 5.7e-14 82.4 169 32.5
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 6.5e-10 68.9 41 80.5
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 7.2e-09 65.5 53 60.4


User provided reference genes

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