Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g14360 Schrenkiella parvula HOM05D003853 ORTHO05D004171 1.2e-76 290.0 181 100.0
Thhalv10004968m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 2.8e-65 252.3 184 83.7
BraA06t27202Z Brassica rapa HOM05D003853 ORTHO05D004171 6.3e-65 251.1 181 79.6
BcaC06g33998 Brassica carinata HOM05D003853 ORTHO05D004171 1.8e-64 249.6 181 78.5
C07p33870 Brassica napus HOM05D003853 ORTHO05D004171 1.8e-64 249.6 181 78.5
BolC7t43901H Brassica oleracea HOM05D003853 ORTHO05D004171 1.8e-64 249.6 181 78.5
AL5G13190 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 2.4e-64 249.2 184 83.7
A06p43140 Brassica napus HOM05D003853 ORTHO05D004171 4.1e-64 248.4 181 79.0
BcaC06g31183 Brassica carinata HOM05D003853 ORTHO05D004171 7.0e-64 247.7 181 75.1
BcaB07g30301 Brassica carinata HOM05D003853 ORTHO05D004171 1.5e-61 240.0 185 80.0
Carub.0005s0241 Capsella rubella HOM05D003853 ORTHO05D004171 1.6e-60 236.5 191 85.9
AT2G03440 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 8.0e-60 234.2 192 81.2
BcaC03g17214 Brassica carinata HOM05D003853 ORTHO05D004171 1.1e-56 223.8 185 76.2
BolC2t11232H Brassica oleracea HOM05D003853 ORTHO05D004171 1.1e-56 223.8 185 76.2
BraA02t08366Z Brassica rapa HOM05D003853 ORTHO05D004171 1.4e-56 223.4 185 74.6
A02p33450 Brassica napus HOM05D003853 ORTHO05D004171 2.5e-53 212.6 190 72.1
C02p51440 Brassica napus HOM05D003853 ORTHO05D004171 2.1e-52 209.5 190 72.6
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 7.0e-48 194.5 185 68.1
CARHR145780 Cardamine hirsuta HOM05D003853 ORTHO05D004171 1.8e-43 179.9 194 66.5
Sp1g12030 Schrenkiella parvula HOM05D003853 ORTHO05D004171 1.5e-37 160.2 181 59.1
BcaB03g13120 Brassica carinata HOM05D003853 ORTHO05D004171 8.0e-36 154.5 181 62.4
CARHR014300 Cardamine hirsuta HOM05D003853 ORTHO05D004171 5.2e-35 151.8 181 58.0
BcaC07g38709 Brassica carinata HOM05D003853 ORTHO05D004171 3.7e-33 145.6 181 63.0
BolC8t49263H Brassica oleracea HOM05D003853 ORTHO05D004171 3.7e-33 145.6 181 60.2
BraA08t35142Z Brassica rapa HOM05D003853 ORTHO05D004171 4.1e-32 142.1 183 61.2
Thhalv10008975m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 7.0e-32 141.4 181 58.0
AL1G25770 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 6.0e-31 138.3 181 54.7
C08p16390 Brassica napus HOM05D003853 ORTHO05D004171 1.7e-30 136.7 131 64.9
Carub.0001s1363 Capsella rubella HOM05D003853 ORTHO05D004171 3.9e-30 135.6 181 59.7
BcaB03g13123 Brassica carinata HOM05D003853 ORTHO05D004171 7.3e-29 131.3 126 65.9
Aa31LG4G16180 Aethionema arabicum HOM05D003853 ORTHO05D004171 1.2e-28 130.6 181 56.9
AT1G13930 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 1.1e-27 127.5 181 55.8
A08p32180 Brassica napus HOM05D003853 ORTHO05D004171 1.7e-25 120.2 124 66.9
BolC8t49264H Brassica oleracea HOM05D003853 ORTHO05D004171 2.4e-24 116.3 124 61.3
BcaC07g38710 Brassica carinata HOM05D003853 ORTHO05D004171 3.2e-24 115.9 124 61.3
C08p16400 Brassica napus HOM05D003853 ORTHO05D004171 3.2e-24 115.9 124 61.3
Duzib251G0928 Durio zibethinus HOM05D003853 ORTHO05D004171 3.9e-22 109.0 125 60.8
Gohir.A03G103000 Gossypium hirsutum HOM05D003853 ORTHO05D004171 3.3e-21 105.9 124 50.8
Thecc.02G335500 Theobroma cacao HOM05D003853 ORTHO05D004171 4.3e-21 105.5 160 46.2
Cfa008902 Carpinus fangiana HOM05D003853 ORTHO05D004171 5.6e-21 105.1 154 48.1
SGA_v2.0_scaffold16G07759 Striga asiatica HOM05D003853 ORTHO05D004171 5.6e-21 105.1 179 41.9
Gorai.005G143900 Gossypium raimondii HOM05D003853 ORTHO05D004171 7.3e-21 104.8 124 49.2
Thecc.02G335600 Theobroma cacao HOM05D003853 ORTHO05D004171 1.2e-20 104.0 126 50.8
Haze_11978 Corylus avellana HOM05D003853 ORTHO05D004171 2.1e-20 103.2 154 53.9
Gohir.D02G128200 Gossypium hirsutum HOM05D003853 ORTHO05D004171 2.1e-20 103.2 124 48.4
BraA08t35141Z Brassica rapa HOM05D003853 ORTHO05D004171 2.8e-20 102.8 124 57.3
Lj6P782T102 Lonicera japonica HOM05D003853 ORTHO05D004171 8.1e-20 101.3 146 44.5
Nn4g23335 Nelumbo nucifera HOM05D003853 ORTHO05D004171 1.1e-19 100.9 125 60.0
CiPaw.05G127700 Carya illinoinensis HOM05D003853 ORTHO05D004171 5.2e-19 98.6 157 43.3
Duzib251G0287 Durio zibethinus HOM05D003853 ORTHO05D004171 5.2e-19 98.6 129 48.1
COL.COLO4_27925 Corchorus olitorius HOM05D003853 ORTHO05D004171 1.2e-18 97.4 153 52.3
Eucgr.B03178 Eucalyptus grandis HOM05D003853 ORTHO05D004171 3.4e-18 95.9 177 47.5
Dinv16707 Davidia involucrata HOM05D003853 ORTHO05D004171 4.4e-18 95.5 156 53.2
A08p32170 Brassica napus HOM05D003853 ORTHO05D004171 5.8e-18 95.1 137 51.8
Potri.008G093200 Populus trichocarpa HOM05D003853 ORTHO05D004171 7.5e-18 94.7 126 50.0
TWI75G0276 Tripterygium wilfordii HOM05D003853 ORTHO05D004171 7.5e-18 94.7 126 51.6
MELO3C012136.2 Cucumis melo HOM05D003853 ORTHO05D004171 9.9e-18 94.4 154 44.8
Lj4g0005239 Lotus japonicus HOM05D003853 ORTHO05D004171 9.9e-18 94.4 132 47.0
Oeu048150.1 Olea europaea HOM05D003853 ORTHO05D004171 9.9e-18 94.4 180 44.4
Sabra10G0122700 Salix brachista HOM05D003853 ORTHO05D004171 9.9e-18 94.4 131 45.8
CsaV3_5G033160 Cucumis sativus L. HOM05D003853 ORTHO05D004171 1.3e-17 94.0 154 41.6
Sabra10G0122600 Salix brachista HOM05D003853 ORTHO05D004171 1.7e-17 93.6 131 45.8
ATR0111G024 Amborella trichopoda HOM05D003853 ORTHO05D004171 2.2e-17 93.2 124 46.8
Lsat_1_v5_gn_4_11980 Lactuca sativa HOM05D003853 ORTHO05D004171 2.2e-17 93.2 82 58.5
Sc04g0007740 Simmondsia chinensis HOM05D003853 ORTHO05D004171 2.2e-17 93.2 155 38.1
Cpa.g.sc1.96 Carica papaya HOM05D003853 ORTHO05D004171 2.9e-17 92.8 122 47.5
Glyma.07G226567 Glycine max HOM05D003853 ORTHO05D004171 2.9e-17 92.8 143 41.3
Glyma.07G226633 Glycine max HOM05D003853 ORTHO05D004171 2.9e-17 92.8 143 41.3
Manes.01G030100 Manihot esculenta HOM05D003853 ORTHO05D004171 2.9e-17 92.8 125 60.0
Sed0005785 Sechium edule HOM05D003853 ORTHO05D004171 2.9e-17 92.8 151 45.7
Potri.010G161200 Populus trichocarpa HOM05D003853 ORTHO05D004171 3.7e-17 92.4 126 45.2
CiPaw.05G127600 Carya illinoinensis HOM05D003853 ORTHO05D004171 4.9e-17 92.0 161 50.9
ECA234G0349 Erigeron canadensis HOM05D003853 ORTHO05D004171 4.9e-17 92.0 130 47.7
HanXRQChr10g0308121 Helianthus annuus HOM05D003853 ORTHO05D004171 4.9e-17 92.0 126 44.4
QL03p071021 Quercus lobata HOM05D003853 ORTHO05D004171 4.9e-17 92.0 178 51.7
Hma1.2p1_0354F.1_g133590 Hydrangea macrophylla HOM05D003853 ORTHO05D004171 6.4e-17 91.7 166 50.0
Sc04g0007730 Simmondsia chinensis HOM05D003853 ORTHO05D004171 8.3e-17 91.3 138 46.4
TAR622G0811 Trochodendron aralioides HOM05D003853 ORTHO05D004171 8.3e-17 91.3 166 40.4
Phvul.002G168000 Phaseolus vulgaris HOM05D003853 ORTHO05D004171 1.1e-16 90.9 125 44.0
THA.LOC104805946 Tarenaya hassleriana HOM05D003853 ORTHO05D004171 1.1e-16 90.9 92 55.4
ClCG05G023860 Citrullus lanatus HOM05D003853 ORTHO05D004171 1.4e-16 90.5 154 40.9
Sopen04g001500 Solanum pennellii HOM05D003853 ORTHO05D004171 1.4e-16 90.5 149 42.3
Glyma.20G027200 Glycine max HOM05D003853 ORTHO05D004171 3.2e-16 89.4 67 64.2
Sabra08G0070000 Salix brachista HOM05D003853 ORTHO05D004171 3.2e-16 89.4 126 48.4
SGA_v2.0_scaffold36G14434 Striga asiatica HOM05D003853 ORTHO05D004171 4.1e-16 89.0 123 46.3
Prupe.1G282500 Prunus persica HOM05D003853 ORTHO05D004171 9.2e-16 87.8 128 50.8
Ah.03g139140 Amaranthus hybridus HOM05D003853 ORTHO05D004171 1.6e-15 87.0 122 45.9
Nitab4.5_0002806g0050 Nicotiana tabacum HOM05D003853 ORTHO05D004171 1.6e-15 87.0 160 47.5
Solyc04g005480.1 Solanum lycopersicum HOM05D003853 ORTHO05D004171 2.1e-15 86.7 160 40.0
Ah.02g126530 Amaranthus hybridus HOM05D003853 ORTHO05D004171 2.7e-15 86.3 73 65.8
MSTRG.7763 Avicennia marina HOM05D003853 ORTHO05D004171 2.7e-15 86.3 179 38.5
Lalb_Chr05g0215091 Lupinus albus HOM05D003853 ORTHO05D004171 2.7e-15 86.3 66 63.6
VMungo0251G2653 Vigna mungo HOM05D003853 ORTHO05D004171 2.7e-15 86.3 125 41.6
PGSC0003DMG400035643 Solanum tuberosum HOM05D003853 ORTHO05D004171 3.5e-15 85.9 165 37.6
Nitab4.5_0000014g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 6.0e-15 85.1 160 39.4
AUR62003133 Chenopodium quinoa HOM05D003853 ORTHO05D004171 1.0e-14 84.3 69 65.2
AUR62007951 Chenopodium quinoa HOM05D003853 ORTHO05D004171 1.0e-14 84.3 128 44.5
unitig_699.g19910 Utricularia gibba HOM05D003853 ORTHO05D004171 1.3e-14 84.0 69 60.9
Ca_18813_v3 Cicer arietinum L. HOM05D003853 ORTHO05D004171 1.7e-14 83.6 126 53.2
Nitab4.5_0015741g0010 Nicotiana tabacum HOM05D003853 ORTHO05D004171 3.0e-14 82.8 70 60.0
Psat7g135240 Pisum sativum HOM05D003853 ORTHO05D004171 3.0e-14 82.8 144 41.0
CSS0028215 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 6.6e-14 81.6 71 62.0
AUR62003131 Chenopodium quinoa HOM05D003853 ORTHO05D004171 6.6e-14 81.6 140 40.7
COL.COLO4_27926 Corchorus olitorius HOM05D003853 ORTHO05D004171 6.6e-14 81.6 149 38.3
ECA246G1290 Erigeron canadensis HOM05D003853 ORTHO05D004171 6.6e-14 81.6 71 59.2
Peaxi162Scf00314g00022 Petunia axillaris HOM05D003853 ORTHO05D004171 6.6e-14 81.6 75 56.0
Peaxi162Scf00930g00051 Petunia axillaris HOM05D003853 ORTHO05D004171 6.6e-14 81.6 123 52.8
Medtr4g082860 Medicago truncatula HOM05D003853 ORTHO05D004171 8.6e-14 81.3 126 44.4
MSTRG.735 Avicennia marina HOM05D003853 ORTHO05D004171 1.5e-13 80.5 70 58.6
CDE02G2907 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 1.5e-13 80.5 71 62.0
Sopen05g007410 Solanum pennellii HOM05D003853 ORTHO05D004171 1.5e-13 80.5 125 48.8
AUR62007952 Chenopodium quinoa HOM05D003853 ORTHO05D004171 1.9e-13 80.1 67 62.7
PGSC0003DMG400028384 Solanum tuberosum HOM05D003853 ORTHO05D004171 3.3e-13 79.3 126 53.2
TPR.G34052 Trifolium pratense HOM05D003853 ORTHO05D004171 3.3e-13 79.3 126 45.2
Psat7g135200 Pisum sativum HOM05D003853 ORTHO05D004171 4.3e-13 79.0 125 41.6
Sed0019389 Sechium edule HOM05D003853 ORTHO05D004171 4.3e-13 79.0 129 49.6
Cpa.g.sc1.97 Carica papaya HOM05D003853 ORTHO05D004171 5.6e-13 78.6 123 42.3
QL03p070993 Quercus lobata HOM05D003853 ORTHO05D004171 5.6e-13 78.6 182 38.5
TPR.G2267 Trifolium pratense HOM05D003853 ORTHO05D004171 5.6e-13 78.6 130 49.2
PSO017G6890 Papaver somniferum HOM05D003853 ORTHO05D004171 7.3e-13 78.2 132 53.0
MSTRG.2322 Avicennia marina HOM05D003853 ORTHO05D004171 1.2e-12 77.4 119 39.5
QL03p071009 Quercus lobata HOM05D003853 ORTHO05D004171 1.2e-12 77.4 180 48.3
Peaxi162Scf00314g00031 Petunia axillaris HOM05D003853 ORTHO05D004171 1.6e-12 77.0 92 50.0
CSS0045101 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 3.6e-12 75.9 71 59.2
vmacro22356 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 4.7e-12 75.5 143 45.5
Lsat_1_v5_gn_3_56161 Lactuca sativa HOM05D003853 ORTHO05D004171 6.2e-12 75.1 85 47.1
SalBow2G1698 Salvia bowleyana HOM05D003853 ORTHO05D004171 6.2e-12 75.1 189 33.9
Migut.E00060 Erythranthe guttata HOM05D003853 ORTHO05D004171 8.1e-12 74.7 197 33.5
Ciclev10033000m.g Citrus clementina HOM05D003853 ORTHO05D004171 1.1e-11 74.3 182 38.5
PGR102G0417 Punica granatum HOM05D003853 ORTHO05D004171 1.1e-11 74.3 125 53.6
PGR102G3239 Punica granatum HOM05D003853 ORTHO05D004171 1.1e-11 74.3 125 53.6
Rhsim03G0019300 Rhododendron simsii HOM05D003853 ORTHO05D004171 1.1e-11 74.3 101 52.5
Ah.03g139160 Amaranthus hybridus HOM05D003853 ORTHO05D004171 1.4e-11 73.9 101 43.6
DCAR_027453 Daucus carota HOM05D003853 ORTHO05D004171 1.8e-11 73.6 182 38.5
CANSAT64G1198 Cannabis sativa HOM05D003853 ORTHO05D004171 2.4e-11 73.2 116 50.9
MD13G1065700 Malus domestica HOM05D003853 ORTHO05D004171 2.4e-11 73.2 186 41.4
SalBow2G1975 Salvia bowleyana HOM05D003853 ORTHO05D004171 2.4e-11 73.2 163 35.6
SGA_v2.0_scaffold287G47154 Striga asiatica HOM05D003853 ORTHO05D004171 2.4e-11 73.2 131 39.7
CDE02G1866 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 3.1e-11 72.8 70 55.7
HanXRQChr15g0477051 Helianthus annuus HOM05D003853 ORTHO05D004171 3.1e-11 72.8 71 50.7
Actinidia28167 Actinidia chinensis HOM05D003853 ORTHO05D004171 6.8e-11 71.6 91 51.6
Medtr4g082830 Medicago truncatula HOM05D003853 ORTHO05D004171 8.9e-11 71.2 69 56.5
HPP92_023639 Vanilla planifolia HOM05D003853 ORTHO05D004171 1.2e-10 70.9 130 37.7
QL03p070977 Quercus lobata HOM05D003853 ORTHO05D004171 1.5e-10 70.5 129 53.5
Migut.L01216 Erythranthe guttata HOM05D003853 ORTHO05D004171 2.0e-10 70.1 135 35.6
Ah.03g139150 Amaranthus hybridus HOM05D003853 ORTHO05D004171 2.6e-10 69.7 124 41.9
PSO478G4998 Papaver somniferum HOM05D003853 ORTHO05D004171 2.6e-10 69.7 99 43.4
vmacro22355 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 2.6e-10 69.7 73 58.9
Zm00001eb007060 Zea mays HOM05D003853 ORTHO05D004171 4.4e-10 68.9 126 41.3
Actinidia12318 Actinidia chinensis HOM05D003853 ORTHO05D004171 9.9e-10 67.8 148 38.5
MBI16_g00500_MAGBIO Magnolia biondii HOM05D003853 ORTHO05D004171 9.9e-10 67.8 107 43.0
TPR.G34063 Trifolium pratense HOM05D003853 ORTHO05D004171 9.9e-10 67.8 74 51.4
MD16G1064200 Malus domestica HOM05D003853 ORTHO05D004171 1.3e-09 67.4 76 51.3
AUR62003132 Chenopodium quinoa HOM05D003853 ORTHO05D004171 2.9e-09 66.2 125 47.2
Lalb_Chr17g0341041 Lupinus albus HOM05D003853 ORTHO05D004171 2.9e-09 66.2 75 45.3
HPP92_023625 Vanilla planifolia HOM05D003853 ORTHO05D004171 4.9e-09 65.5 132 37.1
Nitab4.5_0000334g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 6.4e-09 65.1 124 37.9
Lj2g0020869 Lotus japonicus HOM05D003853 ORTHO05D004171 1.1e-08 64.3 110 38.2
Os10g0330000 Oryza sativa ssp. japonica HOM05D003853 ORTHO05D004171 1.4e-08 63.9 69 53.6
Sopen05g007400 Solanum pennellii HOM05D003853 ORTHO05D004171 1.4e-08 63.9 75 52.0
Ca_04944_v3 Cicer arietinum L. HOM05D003853 ORTHO05D004171 1.9e-08 63.5 76 47.4
MD13G1065600 Malus domestica HOM05D003853 ORTHO05D004171 1.9e-08 63.5 125 51.2
FAN17G1589 Fragaria x ananassa HOM05D003853 ORTHO05D004171 2.4e-08 63.2 125 43.2
Manes.01G030000 Manihot esculenta HOM05D003853 ORTHO05D004171 4.2e-08 62.4 102 42.2
SEGI_33923 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 4.2e-08 62.4 133 45.9
Psat2g127960 Pisum sativum HOM05D003853 ORTHO05D004171 7.1e-08 61.6 105 38.1
Cc11_g12330 Coffea canephora HOM05D003853 ORTHO05D004171 1.6e-07 60.5 168 42.9
SEGI_07999 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 1.6e-07 60.5 81 49.4
vmacro22354 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 2.1e-07 60.1 92 46.7
FAN12G3704 Fragaria x ananassa HOM05D002141 ORTHO05D002119 3.5e-07 59.3 125 40.0
CAN.G1340.8 Capsicum annuum HOM05D003853 ORTHO05D004171 4.6e-07 58.9 79 45.6
Zm00001eb334140 Zea mays HOM05D003853 ORTHO05D004171 1.0e-06 57.8 128 36.7
Solyc05g012570.3 Solanum lycopersicum HOM05D003853 ORTHO05D004171 1.3e-06 57.4 76 48.7
Medtr5g043660 Medicago truncatula HOM05D003853 ORTHO05D004171 3.0e-06 56.2 106 38.7


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