Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 2.3e-38 163.3 116 100.0
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 5.1e-33 145.6 116 84.5
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 1.5e-32 144.1 116 84.5
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 3.3e-32 142.9 115 69.6
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 3.3e-32 142.9 115 69.6
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 3.3e-32 142.9 115 69.6
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 4.0e-30 136.0 116 81.9
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 4.4e-29 132.5 115 67.8
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 7.6e-29 131.7 112 83.9
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 1.1e-27 127.9 114 83.3
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 2.4e-27 126.7 113 80.5
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 1.9e-24 117.1 114 78.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 4.0e-22 109.4 111 68.5
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 3.8e-20 102.8 114 69.3
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 1.1e-19 101.3 116 66.4
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 1.9e-19 100.5 106 53.8
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 7.1e-19 98.6 83 72.3
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 9.3e-19 98.2 114 58.8
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 1.2e-18 97.8 116 62.1
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 1.2e-18 97.8 116 46.6
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 1.2e-18 97.8 106 65.1
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.2e-18 97.8 116 62.1
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 4.6e-18 95.9 116 44.8
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 7.9e-18 95.1 113 50.4
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.0e-17 94.7 114 45.6
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.3e-17 94.4 114 62.3
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 1.3e-17 94.4 114 60.5
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 3.0e-17 93.2 82 69.5
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 3.0e-17 93.2 118 62.7
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 3.9e-17 92.8 106 63.2
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 5.1e-17 92.4 117 61.5
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 8.7e-17 91.7 82 58.5
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.1e-16 91.3 116 57.8
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 1.1e-16 91.3 103 63.1
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 1.5e-16 90.9 116 45.7
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 1.5e-16 90.9 116 64.7
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 1.9e-16 90.5 120 60.8
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 2.5e-16 90.1 114 67.5
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 5.6e-16 89.0 116 62.9
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 7.4e-16 88.6 83 59.0
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 7.4e-16 88.6 117 60.7
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 9.6e-16 88.2 99 68.7
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 9.6e-16 88.2 116 45.7
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 9.6e-16 88.2 114 57.0
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 1.3e-15 87.8 116 55.2
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.3e-15 87.8 102 49.0
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 1.3e-15 87.8 116 48.3
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.3e-15 87.8 117 55.6
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.3e-15 87.8 105 47.6
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.1e-15 87.0 118 44.1
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 2.1e-15 87.0 116 62.9
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 2.8e-15 86.7 100 58.0
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 2.8e-15 86.7 116 44.8
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 3.6e-15 86.3 114 44.7
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 3.6e-15 86.3 115 58.3
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 3.6e-15 86.3 113 64.6
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 3.6e-15 86.3 105 66.7
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 4.8e-15 85.9 114 63.2
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 6.2e-15 85.5 116 56.9
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 8.1e-15 85.1 142 40.1
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.1e-14 84.7 105 47.6
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.1e-14 84.7 116 59.5
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.1e-14 84.7 116 46.6
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 1.4e-14 84.3 116 57.8
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 1.4e-14 84.3 102 48.0
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.8e-14 84.0 117 63.2
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 3.1e-14 83.2 116 59.5
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 3.1e-14 83.2 105 61.9
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 3.1e-14 83.2 116 55.2
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.0e-14 82.8 118 44.1
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 4.0e-14 82.8 77 55.8
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 4.0e-14 82.8 114 63.2
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 4.0e-14 82.8 111 47.7
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 5.3e-14 82.4 105 46.7
C04p62430 Brassica napus HOM05D006591 ORTHO05D007861 6.9e-14 82.0 63 76.2
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 6.9e-14 82.0 52 88.5
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 9.0e-14 81.6 84 56.0
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 9.0e-14 81.6 114 59.6
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 9.0e-14 81.6 116 56.0
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.2e-13 81.3 116 44.0
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 1.5e-13 80.9 114 55.3
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 2.0e-13 80.5 116 44.0
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 2.6e-13 80.1 101 66.3
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.5e-13 79.3 84 54.8
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.5e-13 79.3 84 54.8
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 4.5e-13 79.3 114 56.1
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 9.9e-13 78.2 118 58.5
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.3e-12 77.8 84 53.6
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.3e-12 77.8 114 59.6
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 1.3e-12 77.8 101 55.4
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.2e-12 77.0 104 62.5
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 2.2e-12 77.0 116 58.6
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.8e-12 76.3 106 60.4
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.8e-12 76.3 106 61.3
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.4e-12 75.5 104 61.5
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 1.1e-11 74.7 112 59.8
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 1.1e-11 74.7 114 59.6
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.9e-11 73.9 119 56.3
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 9.3e-11 71.6 114 55.3
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 2.7e-10 70.1 101 42.6
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 6.0e-10 68.9 116 42.2
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 2.3e-09 67.0 80 47.5
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.5e-08 64.3 63 55.6
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 2.5e-08 63.5 99 40.4
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 2.5e-08 63.5 116 56.0
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 4.3e-08 62.8 101 41.6
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 7.4e-08 62.0 82 42.7
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 2.1e-07 60.5 67 47.8
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 1.4e-06 57.8 66 43.9
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 1.8e-06 57.4 114 33.3
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.4e-06 57.0 84 46.4
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 6.9e-06 55.5 97 35.1


User provided reference genes

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