Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.7e-91 339.3 175 100.0
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.7e-83 312.8 175 92.0
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 3.2e-82 308.5 176 89.8
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 7.4e-79 297.4 175 88.0
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 9.7e-79 297.0 175 86.9
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 2.2e-78 295.8 175 85.7
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 6.3e-78 294.3 175 86.3
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 6.3e-78 294.3 175 86.3
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 6.3e-78 294.3 175 86.3
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 5.3e-77 291.2 175 85.1
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 8.5e-75 283.9 175 84.6
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 1.4e-74 283.1 177 84.7
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.1e-66 256.9 148 87.8
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 9.4e-66 253.8 144 91.0
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 9.4e-66 253.8 144 91.0
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 9.4e-66 253.8 144 91.0
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.1e-65 252.7 158 80.4
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 1.2e-60 236.9 174 70.1
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 2.2e-46 189.5 176 57.4
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 3.7e-46 188.7 166 61.4
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 5.4e-45 184.9 152 63.8
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.7e-44 182.6 173 57.2
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 3.5e-44 182.2 176 54.5
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 3.5e-44 182.2 127 69.3
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 5.9e-44 181.4 139 64.7
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 5.9e-44 181.4 163 60.1
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.0e-43 180.6 130 68.5
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.3e-43 180.3 125 71.2
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 1.3e-43 180.3 148 63.5
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 1.7e-43 179.9 150 62.0
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.3e-43 179.5 173 56.6
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 2.9e-43 179.1 168 57.7
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 2.9e-43 179.1 131 67.9
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 2.9e-43 179.1 144 64.6
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.1e-42 177.2 173 56.1
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 1.9e-42 176.4 168 58.3
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 2.5e-42 176.0 172 56.4
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 3.3e-42 175.6 130 65.4
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 4.2e-42 175.3 177 53.1
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 4.2e-42 175.3 153 59.5
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 4.2e-42 175.3 175 55.4
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 5.6e-42 174.9 173 55.5
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 5.6e-42 174.9 146 64.4
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 7.2e-42 174.5 169 56.2
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 7.2e-42 174.5 136 64.0
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 9.5e-42 174.1 139 64.7
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 9.5e-42 174.1 153 58.8
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 1.6e-41 173.3 173 53.8
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 2.1e-41 172.9 146 63.0
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 2.8e-41 172.6 150 60.7
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 2.8e-41 172.6 140 62.9
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 6.1e-41 171.4 164 54.9
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 6.1e-41 171.4 144 59.7
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 8.0e-41 171.0 179 52.5
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 1.0e-40 170.6 140 62.1
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.0e-40 170.6 131 63.4
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 1.4e-40 170.2 127 66.1
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.8e-40 169.9 171 53.8
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 2.3e-40 169.5 182 50.5
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 2.3e-40 169.5 142 62.0
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 3.0e-40 169.1 127 66.1
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 4.0e-40 168.7 139 61.9
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 5.2e-40 168.3 181 53.0
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 5.2e-40 168.3 172 54.1
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 5.2e-40 168.3 169 56.2
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 6.8e-40 167.9 164 57.3
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 6.8e-40 167.9 141 61.7
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 8.9e-40 167.5 159 58.5
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.5e-39 166.8 123 64.2
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 1.5e-39 166.8 173 53.8
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 1.5e-39 166.8 126 64.3
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.5e-39 166.8 127 64.6
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 2.0e-39 166.4 173 54.3
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 2.0e-39 166.4 145 60.0
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.4e-39 165.6 137 65.0
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 7.5e-39 164.5 119 66.4
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 7.5e-39 164.5 119 66.4
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 7.5e-39 164.5 127 67.7
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 7.5e-39 164.5 175 52.0
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 7.5e-39 164.5 130 64.6
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 9.8e-39 164.1 141 60.3
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 9.8e-39 164.1 158 56.3
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 2.2e-38 162.9 128 62.5
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 2.2e-38 162.9 180 51.1
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 2.2e-38 162.9 109 69.7
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 2.9e-38 162.5 182 51.6
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 4.9e-38 161.8 117 65.8
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 8.3e-38 161.0 121 63.6
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 8.3e-38 161.0 176 51.7
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 4.1e-37 158.7 127 61.4
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 5.4e-37 158.3 169 50.3
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 7.0e-37 157.9 163 50.9
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 9.2e-37 157.5 143 58.7
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.6e-36 156.8 122 64.8
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 2.7e-36 156.0 120 60.8
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 5.9e-36 154.8 121 62.0
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 7.8e-36 154.5 121 61.2
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 2.3e-35 152.9 122 59.0
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.1e-34 150.6 143 53.8
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 4.3e-34 148.7 104 66.3
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 5.6e-34 148.3 116 62.9
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 9.8e-31 137.5 117 57.3
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.2e-25 120.6 121 52.1
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.4e-24 117.1 84 64.3
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 5.2e-24 115.2 103 64.1
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 1.3e-22 110.5 146 44.5
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 4.1e-21 105.5 83 66.3
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 5.4e-21 105.1 139 43.9
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 3.0e-19 99.4 119 44.5
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 4.7e-17 92.0 70 67.1
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.1e-16 90.9 121 43.0
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 2.2e-14 83.2 115 39.1
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 8.4e-14 81.3 50 72.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 4.0e-08 62.4 134 38.1


User provided reference genes

Program Settings