Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g13760 Schrenkiella parvula HOM05D005857 ORTHO05D007193 5.4e-36 153.7 72 100.0
BcaC03g17146 Brassica carinata HOM05D005857 ORTHO05D007193 2.5e-33 144.8 72 93.1
Thhalv10005238m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 7.4e-33 143.3 72 93.1
BcaB07g30330 Brassica carinata HOM05D005857 ORTHO05D007193 1.3e-32 142.5 73 93.2
C02p50660 Brassica napus HOM05D005857 ORTHO05D007193 1.3e-32 142.5 73 93.2
BolC2t11149H Brassica oleracea HOM05D005857 ORTHO05D007193 1.3e-32 142.5 73 93.2
BraA02t08316Z Brassica rapa HOM05D005857 ORTHO05D007193 1.3e-32 142.5 73 93.2
Carub.0005s0154 Capsella rubella HOM05D005857 ORTHO05D007193 1.3e-32 142.5 73 93.2
CARHR145070 Cardamine hirsuta HOM05D005857 ORTHO05D007193 1.3e-32 142.5 73 93.2
AT2G02510 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 2.1e-32 141.7 73 91.8
AL5G11780 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 1.4e-31 139.0 73 90.4
BolC5t29979H Brassica oleracea HOM05D005857 ORTHO05D007193 1.4e-31 139.0 74 89.2
Thhalv10009257m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 3.1e-31 137.9 74 89.2
Sp1g12820 Schrenkiella parvula HOM05D005857 ORTHO05D007193 5.3e-31 137.1 74 87.8
A06p10470 Brassica napus HOM05D005857 ORTHO05D007193 1.2e-30 136.0 75 86.7
C05p12250 Brassica napus HOM05D005857 ORTHO05D007193 1.2e-30 136.0 75 86.7
BraA06t24227Z Brassica rapa HOM05D005857 ORTHO05D007193 1.2e-30 136.0 75 86.7
AL1G26340 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 7.6e-30 133.3 74 85.1
AT1G14450 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 7.6e-30 133.3 74 85.1
BcaB08g34397 Brassica carinata HOM05D005857 ORTHO05D007193 7.6e-30 133.3 74 85.1
BcaB03g13096 Brassica carinata HOM05D005857 ORTHO05D007193 1.0e-29 132.9 75 84.0
BcaC05g25348 Brassica carinata HOM05D005857 ORTHO05D007193 3.8e-29 131.0 75 84.0
CARHR014900 Cardamine hirsuta HOM05D005857 ORTHO05D007193 8.4e-29 129.8 74 83.8
Carub.0001s1416 Capsella rubella HOM05D005857 ORTHO05D007193 1.1e-28 129.4 74 83.8
Aa31LG2G7600 Aethionema arabicum HOM05D005857 ORTHO05D007193 5.5e-28 127.1 76 78.9
THA.LOC104801779 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 9.3e-28 126.3 66 86.4
Aa31LG1G600 Aethionema arabicum HOM05D005857 ORTHO05D007193 2.1e-27 125.2 72 84.7
C08p16740 Brassica napus HOM05D005857 ORTHO05D007193 4.6e-27 124.0 75 80.0
THA.LOC104805131 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 8.7e-26 119.8 66 78.8
A02p32930 Brassica napus HOM05D005857 ORTHO05D007193 4.3e-25 117.5 62 88.7
COL.COLO4_31107 Corchorus olitorius HOM05D005857 ORTHO05D007193 9.6e-25 116.3 72 69.4
BcaC07g41575 Brassica carinata HOM05D005857 ORTHO05D007193 1.6e-24 115.5 74 77.0
Manes.14G164233 Manihot esculenta HOM05D005857 ORTHO05D007193 1.4e-23 112.5 72 68.1
Manes.06G013700 Manihot esculenta HOM05D005857 ORTHO05D007193 2.6e-22 108.2 72 65.3
TWI23G0165 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 4.5e-22 107.5 71 69.0
Thecc.06G020800 Theobroma cacao HOM05D005857 ORTHO05D007193 5.8e-22 107.1 66 68.2
Duzib133G0295 Durio zibethinus HOM05D005857 ORTHO05D007193 1.7e-21 105.5 66 68.2
TWI59G0768 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 1.7e-21 105.5 70 70.0
CANSAT01G1822 Cannabis sativa HOM05D005857 ORTHO05D007193 2.9e-21 104.8 61 75.4
Cpa.g.sc34.126 Carica papaya HOM05D005857 ORTHO05D007193 2.9e-21 104.8 72 68.1
PGR042G3007 Punica granatum HOM05D005857 ORTHO05D007193 2.9e-21 104.8 70 68.6
AUR62040136 Chenopodium quinoa HOM05D005857 ORTHO05D007193 1.1e-20 102.8 64 73.4
FvH4_5g27520 Fragaria vesca HOM05D005857 ORTHO05D007193 1.1e-20 102.8 63 73.0
Potri.004G229900 Populus trichocarpa HOM05D005857 ORTHO05D007193 1.1e-20 102.8 59 74.6
Solyc01g102830.3 Solanum lycopersicum HOM05D005857 ORTHO05D007193 1.1e-20 102.8 72 65.3
Sopen01g045230 Solanum pennellii HOM05D005857 ORTHO05D007193 1.1e-20 102.8 72 65.3
Nitab4.5_0006159g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.4e-20 102.4 72 63.9
Prupe.1G586500 Prunus persica HOM05D005857 ORTHO05D007193 1.4e-20 102.4 60 75.0
PGSC0003DMG400018258 Solanum tuberosum HOM05D005857 ORTHO05D007193 1.4e-20 102.4 72 65.3
Gohir.A05G160000 Gossypium hirsutum HOM05D005857 ORTHO05D007193 1.9e-20 102.1 71 62.0
Gohir.D05G162700 Gossypium hirsutum HOM05D005857 ORTHO05D007193 1.9e-20 102.1 71 62.0
Gorai.009G167700 Gossypium raimondii HOM05D005857 ORTHO05D007193 1.9e-20 102.1 71 62.0
QL02p103650 Quercus lobata HOM05D005857 ORTHO05D007193 2.5e-20 101.7 71 64.8
SalBow1G1563 Salvia bowleyana HOM05D005857 ORTHO05D007193 2.5e-20 101.7 72 65.3
Nitab4.5_0000521g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 3.2e-20 101.3 72 62.5
MD08G1249300 Malus domestica HOM05D005857 ORTHO05D007193 4.2e-20 100.9 57 77.2
MD15G1444100 Malus domestica HOM05D005857 ORTHO05D007193 4.2e-20 100.9 57 77.2
CiPaw.06G177300 Carya illinoinensis HOM05D005857 ORTHO05D007193 7.1e-20 100.1 68 67.6
Oeu010607.1 Olea europaea HOM05D005857 ORTHO05D007193 7.1e-20 100.1 71 62.0
Aqoxy5G01841 Aquilegia oxysepala HOM05D005857 ORTHO05D007193 9.3e-20 99.8 61 70.5
CsaV3_5G027560 Cucumis sativus L. HOM05D005857 ORTHO05D007193 1.2e-19 99.4 68 64.7
Peaxi162Scf00194g01021 Petunia axillaris HOM05D005857 ORTHO05D007193 1.2e-19 99.4 58 74.1
CSS0006636 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 1.6e-19 99.0 61 68.9
CSS0043387 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 1.6e-19 99.0 61 68.9
vmacro01623 Vaccinium macrocarpon HOM05D005857 ORTHO05D007193 2.1e-19 98.6 70 62.9
AUR62032483 Chenopodium quinoa HOM05D005857 ORTHO05D007193 2.7e-19 98.2 64 70.3
FAN18G0749 Fragaria x ananassa HOM05D005857 ORTHO05D007193 2.7e-19 98.2 54 77.8
RcHm_v2.0_Chr7g0218891 Rosa chinensis HOM05D005857 ORTHO05D007193 2.7e-19 98.2 71 64.8
Sed0006374 Sechium edule HOM05D005857 ORTHO05D007193 3.5e-19 97.8 61 68.9
SGA_v2.0_scaffold100G29556 Striga asiatica HOM05D001195 ORTHO05D001138 3.5e-19 97.8 72 62.5
CAN.G1379.7 Capsicum annuum HOM05D005857 ORTHO05D007193 4.6e-19 97.4 72 63.9
PSO210G5758 Papaver somniferum HOM05D005857 ORTHO05D007193 4.6e-19 97.4 62 69.4
Migut.B00707 Erythranthe guttata HOM05D005857 ORTHO05D007193 6.1e-19 97.1 63 68.3
Cc08_g11670 Coffea canephora HOM05D005857 ORTHO05D007193 7.9e-19 96.7 61 68.9
PSO447G0367 Papaver somniferum HOM05D005857 ORTHO05D007193 7.9e-19 96.7 62 67.7
FAN04G0073 Fragaria x ananassa HOM05D005857 ORTHO05D007193 1.0e-18 96.3 54 75.9
DCAR_001733 Daucus carota HOM05D005857 ORTHO05D007193 1.3e-18 95.9 72 61.1
Oeu000158.1 Olea europaea HOM05D005857 ORTHO05D007193 1.3e-18 95.9 62 66.1
HanXRQChr11g0343801 Helianthus annuus HOM05D005857 ORTHO05D007193 5.1e-18 94.0 62 67.7
EL10Ac3g06399 Beta vulgaris HOM05D005857 ORTHO05D007193 6.7e-18 93.6 49 81.6
FAN08G0400 Fragaria x ananassa HOM05D005857 ORTHO05D007193 6.7e-18 93.6 53 77.4
Cfa004425 Carpinus fangiana HOM05D005857 ORTHO05D007193 8.7e-18 93.2 57 68.4
Haze_09965 Corylus avellana HOM05D005857 ORTHO05D007193 8.7e-18 93.2 57 68.4
ATR1089G102 Amborella trichopoda HOM05D005857 ORTHO05D007193 1.5e-17 92.4 54 70.4
Lalb_Chr12g0195891 Lupinus albus HOM05D005857 ORTHO05D007193 1.5e-17 92.4 66 62.1
Sc03g0005520 Simmondsia chinensis HOM05D005857 ORTHO05D007193 1.9e-17 92.0 62 66.1
MBI03_g21081_MAGBIO Magnolia biondii HOM05D005857 ORTHO05D007193 4.3e-17 90.9 53 71.7
SHI07423 Sapria himalayana HOM05D005857 ORTHO05D007193 4.3e-17 90.9 59 64.4
TAR628G1233 Trochodendron aralioides HOM05D005857 ORTHO05D007193 5.7e-17 90.5 62 64.5
CiPaw.05G001000 Carya illinoinensis HOM05D005857 ORTHO05D007193 9.7e-17 89.7 68 57.4
ECA236G3879 Erigeron canadensis HOM05D005857 ORTHO05D007193 1.6e-16 89.0 69 58.0
MD11G1276400 Malus domestica HOM05D005857 ORTHO05D007193 1.6e-16 89.0 69 62.3
Nitab4.5_0001085g0140 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.6e-16 89.0 62 62.9
TPR.G6546 Trifolium pratense HOM05D005857 ORTHO05D007193 1.6e-16 89.0 56 69.6
Atru.chr6.134 Acer truncatum HOM05D005857 ORTHO05D007193 2.2e-16 88.6 64 59.4
Atru.chr6.187 Acer truncatum HOM05D005857 ORTHO05D007193 2.2e-16 88.6 64 59.4
Glyma.17G002300 Glycine max HOM05D005857 ORTHO05D007193 2.2e-16 88.6 55 69.1
Zm00001eb244200 Zea mays HOM05D005857 ORTHO05D007193 2.2e-16 88.6 61 62.3
Lsat_1_v5_gn_9_83180 Lactuca sativa HOM05D005857 ORTHO05D007193 4.8e-16 87.4 59 64.4
Os02g0564200 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 4.8e-16 87.4 61 60.7
Lj4g0009904 Lotus japonicus HOM05D005857 ORTHO05D007193 6.3e-16 87.0 56 64.3
HanXRQChr10g0285581 Helianthus annuus HOM05D005857 ORTHO05D007193 1.1e-15 86.3 62 64.5
Medtr4g134550 Medicago truncatula HOM05D005857 ORTHO05D007193 1.1e-15 86.3 56 66.1
FAN13G1483 Fragaria x ananassa HOM05D005857 ORTHO05D007193 1.4e-15 85.9 55 69.1
Psat0s2555g0160 Pisum sativum HOM05D005857 ORTHO05D007193 1.8e-15 85.5 58 65.5
unitig_8.g2962 Utricularia gibba HOM05D005857 ORTHO05D007193 2.4e-15 85.1 46 82.6
Ca_13524_v3 Cicer arietinum L. HOM05D005857 ORTHO05D007193 3.1e-15 84.7 56 64.3
Actinidia11730 Actinidia chinensis HOM05D005857 ORTHO05D007193 6.9e-15 83.6 46 78.3
Ciclev10003044m.g Citrus clementina HOM05D005857 ORTHO05D007193 1.2e-14 82.8 55 60.0
Ciclev10003046m.g Citrus clementina HOM05D005857 ORTHO05D007193 1.2e-14 82.8 55 60.0
Lsat_1_v5_gn_9_124880 Lactuca sativa HOM05D005857 ORTHO05D007193 1.5e-14 82.4 58 62.1
Nitab4.5_0008987g0050 Nicotiana tabacum HOM05D005857 ORTHO05D007193 3.4e-14 81.3 55 65.5
Phvul.003G091000 Phaseolus vulgaris HOM05D005857 ORTHO05D007193 5.9e-14 80.5 54 64.8
BolC8t49293H Brassica oleracea HOM05D005857 ORTHO05D007193 1.0e-13 79.7 37 94.6
Psat4g149960 Pisum sativum HOM05D005857 ORTHO05D007193 4.2e-12 74.3 57 57.9
Nitab4.5_0004030g0040 Nicotiana tabacum HOM05D005857 ORTHO05D007193 9.4e-12 73.2 65 52.3
Zm00001eb182520 Zea mays HOM05D005857 ORTHO05D007193 4.6e-11 70.9 67 44.8
Zm00001eb353890 Zea mays HOM05D005857 ORTHO05D007193 2.3e-10 68.6 45 62.2
BcaB08g35768 Brassica carinata HOM05D005857 ORTHO05D007193 2.5e-09 65.1 44 72.7
Pp3c9_5250 Physcomitrium patens HOM05D005857 ORTHO05D007193 7.4e-09 63.5 59 47.5
GSVIVG01023132001 Vitis vinifera HOM05D005857 ORTHO05D007193 2.2e-08 62.0 30 83.3
Zm00001eb203220 Zea mays HOM05D005857 ORTHO05D007193 4.8e-08 60.8 50 50.0
Zm00001eb203730 Zea mays HOM05D005857 ORTHO05D007193 1.8e-07 58.9 49 49.0
AagrBONN_evm.TU.Sc2ySwM_369.408 Anthoceros agrestis HOM05D005857 ORTHO05D007193 5.3e-07 57.4 59 45.8
Mapoly0052s0008 Marchantia polymorpha HOM05D005857 ORTHO05D007193 2.0e-06 55.5 53 47.2
Medtr2g036340 Medicago truncatula HOM05D005857 ORTHO05D007193 4.5e-06 54.3 59 45.8
Medtr8g046930 Medicago truncatula HOM05D005857 ORTHO05D007193 4.5e-06 54.3 59 45.8
Pp3c15_3960 Physcomitrium patens HOM05D005857 ORTHO05D007193 4.5e-06 54.3 48 47.9


User provided reference genes

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