Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 7.0e-176 620.5 322 100.0
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 2.2e-153 545.8 310 91.6
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 9.3e-152 540.4 311 91.0
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 6.0e-151 537.7 310 91.6
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 1.3e-150 536.6 313 90.4
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 7.3e-149 530.8 311 91.0
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 1.6e-148 529.6 309 89.0
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 8.1e-148 527.3 309 88.7
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 1.2e-146 523.5 311 89.7
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 2.2e-145 519.2 339 82.9
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 3.5e-143 511.9 309 87.7
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 3.9e-142 508.4 309 86.4
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 2.5e-141 505.8 309 86.7
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 8.2e-124 447.6 309 77.7
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 9.1e-107 391.0 305 67.9
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 9.1e-107 391.0 232 82.8
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 2.0e-106 389.8 233 83.3
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 2.6e-106 389.4 311 69.5
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 4.5e-106 388.7 260 75.4
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 5.9e-106 388.3 305 67.9
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 7.7e-106 387.9 313 66.5
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 1.3e-105 387.1 246 78.9
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 1.7e-105 386.7 305 67.9
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 2.2e-105 386.3 258 75.6
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 2.2e-105 386.3 243 79.0
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 5.0e-105 385.2 298 69.1
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 5.0e-105 385.2 298 69.1
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 1.1e-104 384.0 298 67.4
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 1.4e-104 383.6 241 80.1
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 1.4e-104 383.6 298 69.1
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 1.9e-104 383.3 252 77.8
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 1.6e-103 380.2 310 67.7
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 1.6e-103 380.2 243 76.5
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 2.1e-103 379.8 244 78.3
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 2.7e-103 379.4 271 73.1
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 1.8e-102 376.7 284 70.1
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 1.8e-102 376.7 250 76.0
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 3.0e-102 375.9 308 67.5
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 6.7e-102 374.8 248 75.4
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 8.8e-102 374.4 304 66.1
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 1.1e-101 374.0 306 64.4
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 2.6e-101 372.9 255 76.9
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 5.7e-101 371.7 241 78.0
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 9.7e-101 370.9 223 83.4
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 1.7e-100 370.2 320 63.1
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 1.7e-100 370.2 237 77.6
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.7e-100 370.2 237 77.2
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 2.8e-100 369.4 302 66.6
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 2.8e-100 369.4 230 79.6
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 6.3e-100 368.2 316 64.6
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 8.2e-100 367.9 266 70.7
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 8.2e-100 367.9 237 79.3
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 1.8e-99 366.7 312 65.7
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 2.4e-99 366.3 233 78.5
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 3.1e-99 365.9 260 71.5
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 1.6e-98 363.6 285 68.4
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 2.0e-98 363.2 244 76.6
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 2.6e-98 362.8 233 78.5
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 2.6e-98 362.8 308 64.3
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 3.5e-98 362.5 242 75.2
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 5.9e-98 361.7 251 74.9
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 1.0e-97 360.9 299 66.6
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 1.0e-97 360.9 296 65.9
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 2.9e-97 359.4 301 63.5
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 3.8e-97 359.0 231 76.2
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 2.5e-96 356.3 310 64.2
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 4.2e-96 355.5 237 75.5
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 7.2e-96 354.8 285 64.9
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 1.2e-95 354.0 274 67.5
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 1.2e-95 354.0 245 73.1
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 3.6e-95 352.4 232 75.0
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 3.6e-95 352.4 297 64.6
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 1.8e-94 350.1 283 64.7
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 1.5e-93 347.1 293 62.8
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 2.6e-93 346.3 242 71.1
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 3.3e-93 345.9 239 71.5
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 1.3e-92 344.0 250 71.6
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 3.7e-92 342.4 207 82.1
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 1.8e-91 340.1 246 70.7
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 3.1e-91 339.3 314 60.5
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 9.1e-91 337.8 260 67.3
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 3.5e-90 335.9 249 69.1
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 7.7e-90 334.7 243 72.0
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 2.9e-89 332.8 243 71.2
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 3.8e-89 332.4 207 78.3
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 1.5e-88 330.5 226 73.5
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 2.1e-87 326.6 250 70.0
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 4.7e-87 325.5 216 75.0
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 1.2e-85 320.9 215 75.8
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 1.5e-85 320.5 264 65.9
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 1.7e-84 317.0 261 65.1
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 1.8e-83 313.5 222 71.6
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 7.0e-83 311.6 226 68.6
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 1.2e-82 310.8 352 51.7
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 2.7e-82 309.7 260 63.5
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 4.5e-82 308.9 258 64.0
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 1.7e-81 307.0 216 73.1
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 1.9e-80 303.5 282 62.4
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 2.1e-79 300.1 333 55.0
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 2.3e-78 296.6 193 76.2
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 1.3e-76 290.8 312 58.0
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 1.0e-73 281.2 246 62.2
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 1.7e-73 280.4 184 75.0
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 3.8e-73 279.3 248 62.9
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 8.6e-73 278.1 273 57.5
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 3.7e-68 262.7 207 67.6
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 4.9e-68 262.3 277 51.6
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 8.3e-68 261.5 172 73.8
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 3.2e-67 259.6 247 59.1
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 1.6e-63 247.3 225 60.0
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 4.7e-55 219.2 162 67.3
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 3.2e-51 206.5 177 58.2
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 7.1e-51 205.3 171 63.7
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 1.1e-40 171.4 162 58.0
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 1.8e-38 164.1 155 58.7
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 2.4e-38 163.7 105 77.1
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 5.8e-37 159.1 168 56.0
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 1.2e-34 151.4 144 59.0
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 5.1e-25 119.4 241 38.6
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 3.6e-23 113.2 258 36.4
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 6.2e-23 112.5 144 47.9
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 5.3e-22 109.4 65 78.5
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 5.3e-22 109.4 150 44.7
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 1.9e-19 100.9 146 46.6
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 3.2e-19 100.1 117 52.1
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 3.0e-17 93.6 227 30.4
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 3.3e-16 90.1 246 29.7
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 2.1e-15 87.4 62 66.1
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 6.2e-15 85.9 56 66.1
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 1.0e-12 78.6 49 73.5
FvH4_5g27491 Fragaria vesca HOM05D005661 ORTHO05D046262 3.5e-10 70.1 87 52.9
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 4.3e-08 63.2 65 52.3


User provided reference genes

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