Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g12310 Schrenkiella parvula HOM05D009070 ORTHO05D010560 1.3e-78 296.2 141 100.0
BolC7t43665H Brassica oleracea HOM05D009070 ORTHO05D010560 1.4e-56 223.0 150 73.3
C07p31240 Brassica napus HOM05D009070 ORTHO05D010560 5.4e-56 221.1 150 72.7
A06p44940 Brassica napus HOM05D009070 ORTHO05D010560 1.2e-55 219.9 150 72.0
BraA06t27365Z Brassica rapa HOM05D009070 ORTHO05D010560 1.2e-55 219.9 150 72.0
BcaC06g31365 Brassica carinata HOM05D009070 ORTHO05D010560 4.6e-55 218.0 136 75.0
Thhalv10001063m.g Eutrema salsugineum HOM05D009070 ORTHO05D010560 7.9e-55 217.2 147 67.3
BcaC06g31339 Brassica carinata HOM05D009070 ORTHO05D010560 2.5e-53 212.2 136 75.0
BcaC06g31355 Brassica carinata HOM05D009070 ORTHO05D010560 4.5e-50 201.4 140 72.1
BolC7t43595H Brassica oleracea HOM05D009070 ORTHO05D010560 5.6e-45 184.5 147 60.5
BcaC06g34305 Brassica carinata HOM05D009070 ORTHO05D010560 1.6e-44 183.0 147 59.9
C07p30530 Brassica napus HOM05D009070 ORTHO05D010560 2.1e-44 182.6 146 59.6
BraA06t27412Z Brassica rapa HOM05D009070 ORTHO05D010560 1.3e-41 173.3 148 58.8
A06p45440 Brassica napus HOM05D009070 ORTHO05D010560 1.7e-41 172.9 148 58.8
AT5G47600 Arabidopsis thaliana HOM05D009070 ORTHO05D010560 6.5e-41 171.0 131 60.3
AL8G10370 Arabidopsis lyrata HOM05D009070 ORTHO05D010560 1.4e-40 169.9 127 63.0
Carub.0008s0019 Capsella rubella HOM05D009070 ORTHO05D010560 1.0e-38 163.7 134 58.2
BcaC06g31338 Brassica carinata HOM05D009070 ORTHO05D010560 7.4e-37 157.5 124 60.5
CARHR173750 Cardamine hirsuta HOM05D009070 ORTHO05D010560 9.6e-37 157.1 117 60.7
CARHR173720 Cardamine hirsuta HOM05D009070 ORTHO05D010560 1.3e-36 156.8 129 56.6
BcaC06g31430 Brassica carinata HOM05D009070 ORTHO05D010560 6.3e-36 154.5 124 58.9
BcaC03g16907 Brassica carinata HOM05D009070 ORTHO05D010560 2.1e-31 139.4 145 51.0
Aa31LG9G5420 Aethionema arabicum HOM05D009070 ORTHO05D010560 1.8e-30 136.3 95 64.2
C02p48100 Brassica napus HOM05D009070 ORTHO05D010560 7.4e-29 131.0 148 49.3
BcaC05g26794 Brassica carinata HOM05D009070 ORTHO05D010560 1.3e-28 130.2 117 59.8
THA.LOC104812801 Tarenaya hassleriana HOM05D009070 ORTHO05D010560 1.6e-28 129.8 96 52.1
BraA02t08070Z Brassica rapa HOM05D009070 ORTHO05D010560 3.7e-28 128.6 145 47.6
A02p30520 Brassica napus HOM05D009070 ORTHO05D010560 6.3e-28 127.9 145 46.9
BolC2t10841H Brassica oleracea HOM05D009070 ORTHO05D010560 1.1e-27 127.1 118 52.5
BcaB08g35845 Brassica carinata HOM05D009070 ORTHO05D010560 2.6e-21 105.9 67 74.6
Actinidia02127 Actinidia chinensis HOM05D009070 ORTHO05D010560 3.3e-13 79.0 95 34.7
C03p42220 Brassica napus HOM05D009070 ORTHO05D010560 5.7e-13 78.2 70 50.0
Rhsim05G0054600 Rhododendron simsii HOM05D009070 ORTHO05D010560 3.7e-12 75.5 95 32.6
Dinv39135 Davidia involucrata HOM05D009070 ORTHO05D010560 4.8e-12 75.1 101 35.6
Hma1.2p1_1786F.1_g302310 Hydrangea macrophylla HOM05D001099 ORTHO05D010560 3.1e-11 72.4 115 35.7
Cc08_g12570 Coffea canephora HOM05D001099 ORTHO05D010560 9.1e-11 70.9 97 33.0
Sabra03G0046400 Salix brachista HOM05D009070 ORTHO05D010560 1.5e-08 63.5 106 32.1
vmacro20795 Vaccinium macrocarpon HOM05D009070 ORTHO05D010560 2.5e-08 62.8 97 33.0
Atru.chr9.1326 Acer truncatum HOM05D001099 ORTHO05D000958 9.4e-08 60.8 83 33.7
Dinv21628 Davidia involucrata HOM05D001099 ORTHO05D010560 1.6e-07 60.1 134 34.3
Rhsim07G0020900 Rhododendron simsii HOM05D001099 ORTHO05D000958 2.1e-07 59.7 100 31.0
SEGI_13652 Sequoiadendron giganteum HOM05D001099 ORTHO05D000958 3.6e-07 58.9 90 33.3
Dinv21632 Davidia involucrata HOM05D001099 ORTHO05D000958 4.7e-07 58.5 101 29.7
Lj8P261T47 Lonicera japonica HOM05D001099 ORTHO05D000958 4.7e-07 58.5 90 34.4
RcHm_v2.0_Chr7g0203041 Rosa chinensis HOM05D001099 ORTHO05D000958 4.7e-07 58.5 101 30.7
PGR031G0040 Punica granatum HOM05D001099 ORTHO05D000958 1.0e-06 57.4 89 32.6
QL12p012439 Quercus lobata HOM05D001099 ORTHO05D000958 1.0e-06 57.4 93 29.0
AagrBONN_evm.TU.Sc2ySwM_228.5017 Anthoceros agrestis HOM05D001099 ORTHO05D000958 1.4e-06 57.0 123 30.9
Rhsim09G0039000 Rhododendron simsii HOM05D007337 ORTHO05D000958 1.4e-06 57.0 93 30.1
Actinidia02125 Actinidia chinensis HOM05D001099 ORTHO05D000958 1.8e-06 56.6 118 27.1
FAN04G1733 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.8e-06 56.6 100 31.0
Cc08_g12550 Coffea canephora HOM05D001099 ORTHO05D000958 3.0e-06 55.8 83 31.3
PGR042G2034 Punica granatum HOM05D001099 ORTHO05D000958 3.0e-06 55.8 91 30.8
Manes.14G036000 Manihot esculenta HOM05D001099 ORTHO05D000958 4.0e-06 55.5 100 29.0
Prupe.5G071200 Prunus persica HOM05D001099 ORTHO05D000958 4.0e-06 55.5 90 27.8
COL.COLO4_37190 Corchorus olitorius HOM05D007337 ORTHO05D010560 5.2e-06 55.1 97 25.8
Hund11593 Selenicereus undatus HOM05D001099 ORTHO05D000958 5.2e-06 55.1 82 32.9
CsaV3_3G002780 Cucumis sativus L. HOM05D001099 ORTHO05D000958 6.7e-06 54.7 100 29.0
FAN08G3558 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.7e-06 54.7 100 30.0
Nn5g28904 Nelumbo nucifera HOM05D000136 ORTHO05D000080 6.7e-06 54.7 97 37.1
Nn6g33979 Nelumbo nucifera HOM05D001099 ORTHO05D000958 6.7e-06 54.7 101 27.7
Sed0013728 Sechium edule HOM05D001099 ORTHO05D000958 6.7e-06 54.7 106 28.3
GSVIVG01018654001 Vitis vinifera HOM05D001099 ORTHO05D000958 6.7e-06 54.7 101 30.7
Aqoxy5G03898 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 8.8e-06 54.3 80 32.5
MELO3C025085.2 Cucumis melo HOM05D000136 ORTHO05D000080 8.8e-06 54.3 128 32.0
Dinv39133 Davidia involucrata HOM05D001099 ORTHO05D010560 8.8e-06 54.3 109 26.6
Eucgr.E00433 Eucalyptus grandis HOM05D001099 ORTHO05D000958 8.8e-06 54.3 91 31.9
Manes.06G134700 Manihot esculenta HOM05D001099 ORTHO05D000958 8.8e-06 54.3 101 29.7


User provided reference genes

Program Settings