Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 1.0e-158 563.5 317 100.0
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 2.7e-140 502.3 317 87.7
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 9.2e-136 487.3 317 89.0
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 1.7e-134 483.0 318 87.4
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 3.4e-130 468.8 317 84.5
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 3.4e-130 468.8 317 84.5
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 1.7e-129 466.5 317 84.2
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 1.4e-128 463.4 314 82.8
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 1.8e-128 463.0 312 84.9
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 2.0e-127 459.5 312 84.3
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 1.0e-123 447.2 317 80.4
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 1.0e-123 447.2 317 80.4
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 3.1e-123 445.7 317 80.4
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 4.9e-121 438.3 317 80.8
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 6.2e-108 394.8 360 69.2
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 5.4e-104 381.7 312 75.0
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 1.6e-103 380.2 314 68.8
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 4.7e-100 368.6 313 68.7
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 5.2e-99 365.2 314 65.9
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 1.2e-98 364.0 315 69.2
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 1.3e-97 360.5 314 65.3
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 1.7e-97 360.1 307 66.4
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 2.2e-97 359.8 317 65.6
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 8.4e-97 357.8 324 67.0
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 1.4e-96 357.1 314 67.5
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 1.9e-96 356.7 321 60.1
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 1.9e-96 356.7 314 67.5
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.5e-95 352.4 325 64.9
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 1.3e-94 350.5 313 63.6
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 1.7e-94 350.1 312 65.4
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 6.6e-94 348.2 314 66.2
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 8.7e-94 347.8 332 64.2
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 8.7e-94 347.8 315 66.7
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 8.7e-94 347.8 320 65.9
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.1e-93 347.4 328 64.3
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.1e-93 347.4 333 64.0
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 3.3e-93 345.9 335 63.0
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 4.3e-93 345.5 341 62.5
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 4.3e-93 345.5 309 68.3
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 5.6e-93 345.1 306 66.0
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 5.6e-93 345.1 331 63.7
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 2.1e-92 343.2 322 64.0
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.1e-92 343.2 316 64.2
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 2.8e-92 342.8 318 64.5
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.6e-92 342.4 326 63.5
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 2.4e-91 339.7 344 59.9
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 4.0e-91 339.0 312 63.1
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 5.3e-91 338.6 313 63.6
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 2.0e-90 336.7 314 63.1
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 2.6e-90 336.3 324 62.3
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 7.6e-90 334.7 315 63.2
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 1.3e-89 334.0 320 64.4
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 1.7e-89 333.6 307 64.8
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 2.2e-89 333.2 325 61.2
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 8.4e-89 331.3 324 63.0
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.4e-88 330.5 311 62.4
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 2.4e-88 329.7 329 61.1
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 9.3e-88 327.8 316 61.1
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 1.2e-87 327.4 318 61.3
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 1.6e-87 327.0 327 60.9
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 2.1e-87 326.6 306 64.1
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 1.3e-86 323.9 306 56.2
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 1.8e-86 323.6 309 60.8
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 3.0e-86 322.8 325 60.9
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 3.9e-86 322.4 315 58.7
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 3.9e-86 322.4 317 61.5
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 3.9e-86 322.4 307 59.9
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 3.9e-86 322.4 322 61.5
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 5.1e-86 322.0 324 59.0
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 6.7e-86 321.6 337 60.8
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.5e-85 320.5 314 54.5
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 4.3e-85 318.9 332 58.4
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 5.6e-85 318.5 315 55.6
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 1.6e-84 317.0 310 62.6
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 1.1e-83 314.3 321 58.3
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 3.4e-82 309.3 331 58.6
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 2.2e-81 306.6 311 55.6
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 2.9e-81 306.2 326 55.2
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.9e-80 303.5 320 52.5
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 5.5e-80 302.0 326 58.0
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 6.0e-79 298.5 402 44.5
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.3e-78 297.4 307 57.7
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.3e-78 297.4 307 57.7
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 1.1e-77 294.3 263 66.2
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 1.1e-75 287.7 166 88.6
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 5.8e-74 282.0 304 55.3
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 1.7e-73 280.4 287 54.0
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 1.7e-73 280.4 188 72.9
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 3.8e-73 279.3 324 51.9
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 1.4e-72 277.3 322 54.3
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 6.0e-71 271.9 308 55.5
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 1.8e-70 270.4 314 51.0
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 2.3e-70 270.0 259 60.6
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 8.7e-70 268.1 266 65.0
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 1.1e-69 267.7 195 67.2
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 4.3e-69 265.8 191 67.5
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 9.6e-69 264.6 312 48.1
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.6e-68 263.8 262 56.5
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 2.1e-68 263.5 189 67.7
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 3.7e-68 262.7 145 91.7
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 8.2e-68 261.5 183 68.9
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 2.3e-62 243.4 336 48.8
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 1.8e-59 233.8 238 63.0
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 4.2e-56 222.6 330 49.7
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 1.6e-55 220.7 195 53.8
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 1.8e-54 217.2 213 59.2
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 6.9e-51 205.3 205 54.1
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 2.2e-49 200.3 157 84.7
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 6.1e-47 192.2 314 42.7
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 2.0e-45 187.2 315 41.3
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 9.4e-40 168.3 411 31.9
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 9.4e-40 168.3 134 60.4
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 6.5e-25 119.0 120 52.5
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 8.6e-25 118.6 349 28.7
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 8.8e-22 108.6 78 67.9
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 3.7e-20 103.2 190 37.4
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 1.1e-19 101.7 97 60.8
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 2.0e-18 97.4 78 60.3
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 1.3e-17 94.7 64 76.6
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 1.7e-17 94.4 143 41.3
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 4.3e-16 89.7 50 84.0
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 2.1e-15 87.4 55 67.3
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 2.0e-13 80.9 146 35.6
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 2.0e-13 80.9 54 74.1
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 2.0e-13 80.9 149 34.9
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.5e-08 64.7 81 42.0
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 1.9e-08 64.3 44 72.7
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 4.7e-07 59.7 60 48.3


User provided reference genes

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