Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 3.9e-81 304.7 147 100.0
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 4.9e-76 287.7 147 93.2
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 9.6e-72 273.5 148 89.2
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 3.7e-71 271.6 147 89.1
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 3.7e-71 271.6 147 89.1
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 3.7e-71 271.6 148 89.9
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 4.8e-71 271.2 148 89.9
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 4.0e-70 268.1 150 86.7
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 3.8e-68 261.5 147 87.1
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 8.4e-68 260.4 149 85.2
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 1.1e-67 260.0 147 86.4
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 1.1e-67 260.0 147 86.4
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 7.4e-64 247.3 148 84.5
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 8.2e-63 243.8 147 82.3
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 1.0e-60 236.9 147 79.6
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 5.7e-56 221.1 151 76.8
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 1.9e-51 206.1 112 88.4
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 1.2e-50 203.4 146 72.6
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 5.7e-48 194.5 154 67.5
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 1.7e-47 193.0 157 65.6
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 2.2e-47 192.6 155 65.2
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 1.1e-46 190.3 155 65.2
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 3.1e-46 188.7 155 65.2
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 9.1e-46 187.2 155 64.5
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.2e-45 186.8 157 64.3
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 2.6e-45 185.7 155 63.9
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 1.3e-44 183.3 155 63.2
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 5.5e-43 177.9 157 61.8
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 3.6e-42 175.3 157 60.5
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 1.0e-41 173.7 156 62.2
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 8.8e-41 170.6 156 61.5
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 7.7e-37 157.5 142 57.0
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 9.7e-32 140.6 160 50.0
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 1.1e-30 137.1 154 50.6
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 3.1e-30 135.6 157 49.0
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 4.1e-30 135.2 155 48.4
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.5e-27 126.7 159 45.3
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 2.5e-27 125.9 156 46.8
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 3.2e-27 125.6 154 45.5
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 3.2e-27 125.6 157 44.6
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 7.2e-27 124.4 155 45.8
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 1.2e-26 123.6 156 42.3
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.6e-26 123.2 151 45.7
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 2.1e-26 122.9 156 42.3
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.6e-26 122.1 151 46.4
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 6.1e-26 121.3 155 43.2
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 6.1e-26 121.3 155 43.2
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 8.0e-26 120.9 156 41.7
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 8.0e-26 120.9 155 43.9
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 1.0e-25 120.6 156 47.4
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 1.0e-25 120.6 150 46.7
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 1.4e-25 120.2 156 45.5
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 1.4e-25 120.2 156 46.8
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.8e-25 119.8 159 44.7
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 3.0e-25 119.0 155 44.5
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 3.0e-25 119.0 151 45.7
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 3.0e-25 119.0 154 42.9
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 4.0e-25 118.6 156 44.9
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 5.2e-25 118.2 156 45.5
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 8.8e-25 117.5 152 43.4
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 1.5e-24 116.7 156 46.2
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 2.6e-24 115.9 151 43.7
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 2.6e-24 115.9 159 45.3
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 5.7e-24 114.8 193 37.8
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 9.8e-24 114.0 162 45.1
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 2.2e-23 112.8 156 46.2
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 3.7e-23 112.1 162 45.1
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 3.7e-23 112.1 156 44.2
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 4.8e-23 111.7 160 42.5
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 6.3e-23 111.3 157 42.7
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 8.3e-23 110.9 156 44.9
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.4e-22 110.2 155 43.2
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 1.8e-22 109.8 155 43.2
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 2.4e-22 109.4 155 47.1
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 3.1e-22 109.0 157 39.5
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 4.1e-22 108.6 156 39.7
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 5.4e-22 108.2 153 43.1
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 7.0e-22 107.8 155 42.6
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 9.1e-22 107.5 155 43.2
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 1.2e-21 107.1 158 41.1
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.6e-21 106.7 155 42.6
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 2.0e-21 106.3 153 45.1
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 3.5e-21 105.5 154 42.2
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 3.5e-21 105.5 156 42.9
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 4.5e-21 105.1 159 40.9
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 4.5e-21 105.1 159 40.9
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 4.5e-21 105.1 155 40.0
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 5.9e-21 104.8 147 42.9
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 1.0e-20 104.0 167 41.9
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 1.0e-20 104.0 155 41.9
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 2.3e-20 102.8 154 40.9
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 2.9e-20 102.4 155 40.6
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 5.0e-20 101.7 159 39.6
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 5.0e-20 101.7 155 40.6
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 6.6e-20 101.3 161 37.3
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.1e-19 100.5 157 40.8
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 1.5e-19 100.1 159 41.5
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 1.5e-19 100.1 159 39.0
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 2.5e-19 99.4 143 42.7
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 4.2e-19 98.6 158 41.8
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 4.2e-19 98.6 157 39.5
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 5.5e-19 98.2 155 39.4
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 5.5e-19 98.2 157 40.1
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 5.5e-19 98.2 157 40.1
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 7.2e-19 97.8 156 40.4
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 9.5e-19 97.4 158 38.6
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 1.2e-18 97.1 155 40.0
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 1.6e-18 96.7 158 42.4
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 1.6e-18 96.7 153 41.2
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 2.8e-18 95.9 155 40.6
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 1.0e-17 94.0 137 42.3
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 1.8e-17 93.2 155 39.4
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 1.8e-17 93.2 104 40.4
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 1.8e-17 93.2 99 46.5
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 2.3e-17 92.8 158 41.1
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 2.3e-17 92.8 113 46.9
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 5.2e-17 91.7 181 35.4
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 6.8e-17 91.3 158 38.6
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 8.9e-17 90.9 115 41.7
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 1.2e-16 90.5 157 41.4
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 3.4e-16 89.0 182 34.6
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 4.4e-16 88.6 158 36.1
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 4.4e-16 88.6 113 45.1
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 5.7e-16 88.2 157 38.9
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 5.7e-16 88.2 212 31.1
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 7.5e-16 87.8 259 28.6
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 2.2e-15 86.3 115 40.0
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 2.8e-15 85.9 155 38.7
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 2.8e-15 85.9 108 41.7
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 3.7e-15 85.5 161 36.6
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 1.1e-14 84.0 203 33.0
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 1.4e-14 83.6 234 29.5
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 2.4e-14 82.8 158 37.3
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 4.1e-14 82.0 131 36.6
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 9.2e-14 80.9 142 35.9
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 2.0e-13 79.7 101 41.6
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 2.0e-13 79.7 175 34.3
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 2.3e-12 76.3 151 33.8
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 5.0e-12 75.1 92 48.9
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 6.6e-12 74.7 67 61.2
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 1.5e-11 73.6 91 45.1
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 5.6e-11 71.6 115 34.8
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 4.7e-10 68.6 161 31.1
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 1.8e-09 66.6 218 28.9
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.5e-08 63.5 68 47.1
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 3.4e-08 62.4 110 33.6
Cfa012421 Carpinus fangiana HOM05D004587 ORTHO05D005512 4.4e-08 62.0 89 37.1
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 5.8e-08 61.6 89 37.1
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 6.4e-07 58.2 68 45.6
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 6.4e-07 58.2 62 48.4
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 1.4e-06 57.0 66 42.4
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 1.9e-06 56.6 112 33.0
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 5.4e-06 55.1 86 39.5


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