Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 1.9e-103 379.4 228 100.0
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 4.6e-97 358.2 228 90.4
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 8.1e-94 347.4 228 86.8
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 2.0e-92 342.8 229 87.3
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 2.6e-92 342.4 229 86.9
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 3.4e-92 342.0 228 85.5
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 2.2e-91 339.3 228 86.0
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 8.4e-91 337.4 229 85.6
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 8.4e-91 337.4 229 85.6
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 1.4e-90 336.7 229 86.0
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 5.5e-90 334.7 229 85.2
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 1.2e-89 333.6 228 84.2
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 3.0e-80 302.4 228 73.2
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 6.3e-62 241.5 225 59.1
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 1.2e-44 184.1 190 50.0
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 7.7e-44 181.4 186 48.9
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 1.0e-43 181.0 189 50.3
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 2.2e-43 179.9 187 50.8
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 2.9e-43 179.5 189 52.4
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 2.9e-43 179.5 190 50.0
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 1.9e-42 176.8 192 48.4
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 2.5e-42 176.4 186 52.2
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 4.2e-42 175.6 194 47.9
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 5.5e-42 175.3 189 55.0
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 1.6e-41 173.7 186 51.6
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 3.6e-41 172.6 190 50.0
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 3.6e-41 172.6 183 48.6
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 4.7e-41 172.2 181 50.3
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 4.7e-41 172.2 188 50.5
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 6.1e-41 171.8 188 50.0
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 6.1e-41 171.8 188 50.0
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 1.4e-40 170.6 184 50.0
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 1.4e-40 170.6 186 46.8
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 1.4e-40 170.6 186 54.3
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 8.8e-40 167.9 178 48.9
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 2.6e-39 166.4 189 47.1
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 3.4e-39 166.0 188 48.4
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 5.7e-39 165.2 191 48.7
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 7.5e-39 164.9 189 53.4
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 2.2e-38 163.3 186 45.2
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 6.3e-38 161.8 184 46.7
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 8.3e-38 161.4 189 52.4
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 1.1e-37 161.0 189 52.4
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 1.1e-37 161.0 185 44.3
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 1.8e-37 160.2 190 46.3
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 1.8e-37 160.2 188 46.3
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 1.8e-37 160.2 187 47.6
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 4.1e-37 159.1 186 48.4
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 1.2e-36 157.5 188 45.2
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 4.5e-36 155.6 185 44.9
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 7.7e-36 154.8 186 43.0
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 1.0e-35 154.5 185 47.6
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 1.3e-35 154.1 176 47.7
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.3e-35 154.1 185 44.3
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 1.3e-35 154.1 186 41.9
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 2.3e-35 153.3 168 47.6
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 2.9e-35 152.9 188 46.3
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 2.9e-35 152.9 195 42.6
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 2.9e-35 152.9 183 44.8
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 5.0e-35 152.1 181 46.4
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 6.6e-35 151.8 192 41.7
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 8.6e-35 151.4 177 44.6
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 1.1e-34 151.0 185 45.9
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 1.1e-34 151.0 185 45.9
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 1.5e-34 150.6 183 47.0
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 3.3e-34 149.4 186 40.9
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 7.2e-34 148.3 190 45.8
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 7.2e-34 148.3 186 42.5
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 7.2e-34 148.3 190 41.1
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 2.1e-33 146.7 184 44.6
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 2.8e-33 146.4 181 44.8
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 3.6e-33 146.0 190 41.1
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 1.4e-32 144.1 186 45.2
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 4.4e-31 139.0 190 38.4
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 4.4e-31 139.0 182 42.9
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 1.7e-30 137.1 185 42.7
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 2.9e-30 136.3 182 44.0
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 2.9e-30 136.3 185 43.2
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 3.7e-30 136.0 177 44.1
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 8.3e-30 134.8 186 36.0
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 1.4e-29 134.0 165 44.8
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 1.8e-29 133.7 180 42.2
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 2.4e-29 133.3 177 40.7
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 2.4e-29 133.3 191 37.2
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 5.4e-29 132.1 182 43.4
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 1.2e-28 131.0 182 39.0
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 1.2e-28 131.0 182 39.0
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 2.7e-28 129.8 265 34.0
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 5.9e-28 128.6 192 40.1
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 1.0e-27 127.9 192 38.5
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 1.0e-27 127.9 189 35.4
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 1.5e-26 124.0 177 36.2
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 8.0e-25 118.2 185 38.9
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 1.4e-24 117.5 111 54.1
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 5.2e-24 115.5 177 38.4
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 1.2e-23 114.4 165 40.6
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 2.6e-23 113.2 184 39.7
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 3.4e-23 112.8 108 50.9
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 3.4e-23 112.8 203 38.4
Migut.M00982 Erythranthe guttata HOM05D006968 ORTHO05D008748 1.2e-20 104.4 130 45.4
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 1.3e-19 100.9 158 43.0
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 1.3e-19 100.9 182 33.5
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 1.7e-19 100.5 109 46.8
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 1.1e-18 97.8 106 46.2
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 9.5e-18 94.7 101 47.5
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 2.1e-17 93.6 87 51.7
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 1.2e-15 87.8 185 36.8
Lalb_Chr18g0055041 Lupinus albus HOM05D006968 ORTHO05D008748 2.0e-15 87.0 191 31.4
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 1.3e-14 84.3 181 35.4
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 1.7e-14 84.0 196 31.6
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 3.7e-14 82.8 87 48.3
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 1.9e-13 80.5 192 35.9
TWI53G1777 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 1.1e-10 71.2 122 36.9
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 1.5e-10 70.9 131 35.9
ATR0737G097 Amborella trichopoda HOM05D006968 ORTHO05D008748 8.1e-09 65.1 140 32.1
Haze_05450 Corylus avellana HOM05D006968 ORTHO05D164033 8.9e-08 61.6 49 59.2
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 2.6e-07 60.1 56 50.0
GSVIVG01021310001 Vitis vinifera HOM05D006968 ORTHO05D008748 5.8e-07 58.9 66 47.0
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 9.9e-07 58.2 54 48.1


User provided reference genes

Program Settings