Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 2.7e-82 308.5 147 100.0
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 6.3e-39 164.5 176 54.0
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 4.2e-35 151.8 180 51.7
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 4.0e-33 145.2 180 49.4
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 9.7e-32 140.6 111 69.4
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 9.7e-32 140.6 173 50.9
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.7e-31 139.8 112 67.9
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 4.1e-30 135.2 169 49.7
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 4.1e-30 135.2 169 49.7
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 4.1e-30 135.2 169 49.7
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 1.6e-29 133.3 169 49.1
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 2.7e-29 132.5 112 65.2
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 7.7e-29 131.0 112 63.4
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 2.1e-26 122.9 110 59.1
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 2.3e-25 119.4 110 60.0
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 6.6e-20 101.3 119 48.7
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 1.1e-19 100.5 120 43.3
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 1.5e-19 100.1 110 51.8
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 1.9e-19 99.8 142 46.5
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 4.2e-19 98.6 119 43.7
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 7.2e-19 97.8 119 45.4
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 9.5e-19 97.4 119 42.0
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 9.5e-19 97.4 119 43.7
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 1.2e-18 97.1 119 44.5
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 1.2e-18 97.1 119 47.1
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 1.6e-18 96.7 109 49.5
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 1.6e-18 96.7 119 44.5
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 2.1e-18 96.3 118 44.1
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 3.6e-18 95.5 119 43.7
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 4.7e-18 95.1 110 49.1
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 4.7e-18 95.1 109 47.7
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 8.0e-18 94.4 122 44.3
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 1.4e-17 93.6 119 42.9
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.8e-17 93.2 107 48.6
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.8e-17 93.2 107 48.6
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 3.0e-17 92.4 110 47.3
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 3.0e-17 92.4 119 45.4
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 5.2e-17 91.7 109 47.7
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 6.8e-17 91.3 118 43.2
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 6.8e-17 91.3 110 47.3
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 6.8e-17 91.3 119 45.4
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 8.9e-17 90.9 120 40.0
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 8.9e-17 90.9 107 47.7
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 1.2e-16 90.5 109 50.5
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 1.2e-16 90.5 113 44.2
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 1.5e-16 90.1 118 43.2
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 1.5e-16 90.1 109 44.0
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 1.5e-16 90.1 110 43.6
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.5e-16 90.1 110 45.5
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 1.5e-16 90.1 110 45.5
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 2.0e-16 89.7 109 42.2
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.6e-16 89.4 107 46.7
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 3.4e-16 89.0 132 43.9
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 4.4e-16 88.6 109 47.7
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.7e-16 88.2 107 46.7
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 5.7e-16 88.2 109 45.9
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 5.7e-16 88.2 110 47.3
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 7.5e-16 87.8 107 44.9
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 9.8e-16 87.4 109 45.0
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 9.8e-16 87.4 108 46.3
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 9.8e-16 87.4 108 46.3
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.3e-15 87.0 123 45.5
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 2.2e-15 86.3 108 49.1
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.8e-15 85.9 108 43.5
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 2.8e-15 85.9 109 45.9
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 3.7e-15 85.5 108 44.4
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 3.7e-15 85.5 109 45.9
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.7e-15 85.5 108 46.3
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 4.9e-15 85.1 107 43.9
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.9e-15 85.1 108 45.4
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.9e-15 85.1 108 45.4
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 8.3e-15 84.3 112 42.9
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 1.8e-14 83.2 108 43.5
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 5.4e-14 81.6 108 41.7
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 7.0e-14 81.3 108 43.5
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 9.2e-14 80.9 108 43.5
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 9.2e-14 80.9 119 39.5
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 9.2e-14 80.9 110 41.8
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.2e-13 80.5 108 44.4
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.2e-13 80.5 108 46.3
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.6e-13 80.1 108 43.5
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.0e-13 79.7 110 40.9
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 3.5e-13 79.0 107 42.1
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 3.5e-13 79.0 108 40.7
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 3.5e-13 79.0 121 38.8
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 4.5e-13 78.6 108 41.7
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 4.5e-13 78.6 107 41.1
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 4.5e-13 78.6 119 37.0
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 4.5e-13 78.6 110 39.1
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 5.9e-13 78.2 108 44.4
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 5.9e-13 78.2 109 39.4
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 5.9e-13 78.2 108 41.7
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 7.8e-13 77.8 108 41.7
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 1.3e-12 77.0 122 36.1
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.7e-12 76.6 108 41.7
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.7e-12 76.6 123 34.1
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.3e-12 76.3 108 44.4
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 2.3e-12 76.3 108 39.8
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 2.9e-12 75.9 109 43.1
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 2.9e-12 75.9 122 36.1
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 3.8e-12 75.5 107 40.2
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 3.8e-12 75.5 108 39.8
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 8.6e-12 74.3 110 40.0
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 1.1e-11 73.9 109 38.5
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 1.1e-11 73.9 109 37.6
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.5e-11 73.6 109 40.4
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 4.3e-11 72.0 108 38.0
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 1.2e-10 70.5 110 39.1
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 1.2e-10 70.5 106 39.6
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 1.6e-10 70.1 109 36.7
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.6e-10 70.1 116 41.4
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 4.7e-10 68.6 107 38.3
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 8.0e-10 67.8 119 32.8
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 5.2e-09 65.1 107 36.4
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 5.2e-09 65.1 121 32.2
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 5.2e-09 65.1 108 40.7
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 1.2e-08 63.9 109 37.6
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 1.1e-06 57.4 96 33.3
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.9e-06 56.6 130 31.5
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 1.9e-06 56.6 106 34.9
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 4.1e-06 55.5 70 41.4
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 4.1e-06 55.5 107 30.8


User provided reference genes

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