Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 1.4e-98 362.8 174 100.0
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 1.6e-89 332.8 170 92.4
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 2.1e-89 332.4 170 91.8
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 1.3e-88 329.7 170 91.8
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 1.8e-88 329.3 170 91.8
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 2.5e-87 325.5 170 88.8
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 2.5e-87 325.5 170 91.2
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 4.3e-87 324.7 170 90.6
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 1.1e-85 320.1 174 87.4
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 2.9e-83 312.0 172 85.5
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 6.9e-77 290.8 174 82.8
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 9.0e-77 290.4 174 82.8
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 9.0e-77 290.4 173 81.5
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 2.2e-75 285.8 173 79.8
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 6.5e-75 284.3 145 91.7
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 1.1e-69 266.9 169 76.3
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 5.9e-68 261.2 202 65.3
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 1.2e-60 236.9 163 69.3
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 3.4e-60 235.3 146 74.7
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.3e-59 233.4 142 78.9
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 1.1e-58 230.3 172 66.9
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.9e-58 229.6 144 74.3
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 9.4e-58 227.3 142 73.9
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 2.1e-57 226.1 138 74.6
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 1.8e-56 223.0 135 73.3
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 2.3e-56 222.6 161 66.5
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 3.9e-56 221.9 133 75.9
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 3.9e-56 221.9 152 71.1
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 3.9e-56 221.9 172 64.5
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 5.1e-56 221.5 155 67.1
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 5.1e-56 221.5 172 63.4
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 5.1e-56 221.5 146 69.2
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 6.7e-56 221.1 168 64.3
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 6.7e-56 221.1 138 74.6
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 6.7e-56 221.1 171 66.1
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 8.8e-56 220.7 138 73.2
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 8.8e-56 220.7 142 69.7
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 8.8e-56 220.7 171 63.7
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 8.8e-56 220.7 138 72.5
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.1e-55 220.3 156 66.0
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 1.1e-55 220.3 175 65.7
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 3.3e-55 218.8 133 76.7
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 3.3e-55 218.8 175 60.0
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 4.4e-55 218.4 159 65.4
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 4.4e-55 218.4 150 66.0
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 5.7e-55 218.0 171 62.0
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 9.7e-55 217.2 150 70.0
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.3e-54 216.9 140 72.1
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.3e-54 216.9 140 72.1
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 1.3e-54 216.9 173 62.4
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.7e-54 216.5 150 66.0
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.2e-54 216.1 145 71.7
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 4.8e-54 214.9 176 61.4
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 6.3e-54 214.5 142 67.6
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 8.2e-54 214.2 133 73.7
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 8.2e-54 214.2 137 74.5
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 1.1e-53 213.8 145 67.6
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 1.1e-53 213.8 154 67.5
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.8e-53 213.0 145 71.0
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.8e-53 213.0 141 71.6
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 1.8e-53 213.0 132 71.2
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 6.9e-53 211.1 174 60.9
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 6.9e-53 211.1 174 60.9
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.2e-52 210.3 146 66.4
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 1.0e-51 207.2 132 71.2
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.7e-51 206.5 129 72.1
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 1.1e-50 203.8 211 53.6
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 2.5e-50 202.6 134 68.7
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 2.5e-50 202.6 171 57.9
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 9.4e-50 200.7 176 58.5
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 1.2e-49 200.3 136 69.9
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.2e-49 200.3 118 78.0
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 1.6e-49 199.9 167 60.5
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 2.1e-49 199.5 154 62.3
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 4.7e-49 198.4 130 67.7
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 2.3e-48 196.1 157 63.7
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 3.9e-48 195.3 107 78.5
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 1.5e-47 193.4 105 80.0
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.6e-47 192.6 170 57.6
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 4.4e-47 191.8 180 55.0
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 7.4e-47 191.0 103 80.6
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.7e-46 189.9 130 63.8
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 6.3e-46 188.0 103 77.7
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.8e-45 186.4 128 63.3
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 7.0e-45 184.5 105 75.2
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 2.6e-44 182.6 121 67.8
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 1.4e-40 170.2 110 70.9
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.3e-38 163.7 179 48.6
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 8.2e-38 161.0 91 72.5
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 7.0e-37 157.9 121 61.2
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 2.7e-36 156.0 94 68.1
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 9.4e-34 147.5 119 58.0
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 2.7e-33 146.0 89 67.4
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 8.8e-32 141.0 112 60.7
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 5.7e-31 138.3 112 55.4
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 9.8e-31 137.5 144 50.0
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 3.5e-28 129.0 174 43.7
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.5e-26 123.6 89 57.3
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 7.2e-26 121.3 89 53.9
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 1.6e-25 120.2 131 48.1
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 4.4e-23 112.1 68 72.1
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.3e-22 110.5 144 43.8
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.2e-22 109.8 58 79.3
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 3.7e-22 109.0 109 56.9
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 9.5e-18 94.4 88 46.6
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 9.2e-13 77.8 100 41.0


User provided reference genes

Program Settings