Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g09330 Schrenkiella parvula HOM05D009819 ORTHO05D011938 2.4e-57 225.3 116 100.0
Thhalv10001188m.g Eutrema salsugineum HOM05D009819 ORTHO05D011938 5.1e-44 181.0 117 80.3
CARHR178570 Cardamine hirsuta HOM05D009819 ORTHO05D011938 1.5e-43 179.5 119 79.0
BcaC06g31608 Brassica carinata HOM05D009819 ORTHO05D011938 7.4e-43 177.2 117 78.6
A06p47110 Brassica napus HOM05D009819 ORTHO05D011938 2.8e-42 175.3 117 76.9
BraA06t27583Z Brassica rapa HOM05D009819 ORTHO05D011938 2.8e-42 175.3 117 76.9
C07p27410 Brassica napus HOM05D009819 ORTHO05D011938 1.4e-41 172.9 118 78.0
BcaB07g30520 Brassica carinata HOM05D009819 ORTHO05D011938 3.1e-41 171.8 118 75.4
BcaC06g34541 Brassica carinata HOM05D009819 ORTHO05D011938 3.1e-41 171.8 118 77.1
A09p21160 Brassica napus HOM05D009819 ORTHO05D011938 4.1e-41 171.4 120 75.8
BolC7t43271H Brassica oleracea HOM05D009819 ORTHO05D011938 4.1e-41 171.4 118 77.1
BraA09t37722Z Brassica rapa HOM05D009819 ORTHO05D011938 4.1e-41 171.4 120 75.8
AT5G44540 Arabidopsis thaliana HOM05D009819 ORTHO05D011938 9.1e-41 170.2 120 78.3
Carub.0008s0396 Capsella rubella HOM05D009819 ORTHO05D011938 7.7e-40 167.2 118 73.7
A02p28450 Brassica napus HOM05D009819 ORTHO05D011938 2.2e-39 165.6 117 73.5
BraA02t07880Z Brassica rapa HOM05D009819 ORTHO05D011938 2.2e-39 165.6 117 73.5
BcaC04g21826 Brassica carinata HOM05D009819 ORTHO05D011938 6.5e-39 164.1 121 75.2
C09p26990 Brassica napus HOM05D009819 ORTHO05D011938 6.5e-39 164.1 121 75.2
BolC9t55582H Brassica oleracea HOM05D009819 ORTHO05D011938 6.5e-39 164.1 121 75.2
BcaB07g30942 Brassica carinata HOM05D009819 ORTHO05D011938 3.2e-38 161.8 120 75.8
BolC2t10545H Brassica oleracea HOM05D009819 ORTHO05D011938 2.0e-32 142.5 100 72.0
BcaC03g16672 Brassica carinata HOM05D009819 ORTHO05D011938 5.2e-28 127.9 93 69.9
C02p45070 Brassica napus HOM05D009819 ORTHO05D011938 3.1e-17 92.0 50 86.0
Aa31LG9G8670 Aethionema arabicum HOM05D009819 ORTHO05D011938 1.2e-16 90.1 120 47.5
CARHR227250 Cardamine hirsuta HOM05D010395 ORTHO05D012583 1.6e-16 89.7 139 43.2
AL7G33450 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.9e-14 82.8 140 40.7
AL7G33470 Arabidopsis lyrata HOM05D010395 ORTHO05D012583 3.2e-14 82.0 140 40.0
BolC1t01399H Brassica oleracea HOM05D010395 ORTHO05D012583 1.0e-12 77.0 133 43.6
C01p14420 Brassica napus HOM05D010395 ORTHO05D012583 1.4e-12 76.6 132 45.5
Carub.0007s2074 Capsella rubella HOM05D010395 ORTHO05D012583 1.4e-12 76.6 138 37.7
Sp7g18780 Schrenkiella parvula HOM05D010395 ORTHO05D012583 1.8e-12 76.3 85 48.2
BcaC01g00670 Brassica carinata HOM05D010395 ORTHO05D012583 8.8e-12 73.9 131 39.7
C03p82940 Brassica napus HOM05D010395 ORTHO05D012583 8.8e-12 73.9 131 39.7
BolC3t20577H Brassica oleracea HOM05D010395 ORTHO05D012583 8.8e-12 73.9 131 39.7
A01p12110 Brassica napus HOM05D010395 ORTHO05D012583 1.2e-11 73.6 113 45.1
BraA01t01154Z Brassica rapa HOM05D010395 ORTHO05D012583 1.2e-11 73.6 113 45.1
AT4G20420 Arabidopsis thaliana HOM05D010395 ORTHO05D012583 1.5e-11 73.2 138 42.0
BcaB03g11673 Brassica carinata HOM05D010395 ORTHO05D012583 1.5e-11 73.2 90 51.1
A08p14880 Brassica napus HOM05D010395 ORTHO05D012583 2.0e-11 72.8 75 52.0
BraA08t33471Z Brassica rapa HOM05D010395 ORTHO05D012583 2.0e-11 72.8 75 52.0
THA.LOC104812932 Tarenaya hassleriana HOM05D009819 ORTHO05D011938 2.2e-10 69.3 129 38.8
THA.LOC104806242 Tarenaya hassleriana HOM05D009819 ORTHO05D011938 1.3e-07 60.1 130 37.7
BraA03t14322Z Brassica rapa HOM05D010395 ORTHO05D012583 5.0e-07 58.2 84 46.4
A03p52430 Brassica napus HOM05D010395 ORTHO05D012583 6.6e-07 57.8 84 45.2
C07p50890 Brassica napus HOM05D010395 ORTHO05D012583 5.5e-06 54.7 84 42.9
BolC7t45587H Brassica oleracea HOM05D010395 ORTHO05D012583 5.5e-06 54.7 84 42.9


User provided reference genes

Program Settings