Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 2.6e-133 478.8 249 100.0
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 1.2e-101 373.6 302 68.9
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 6.4e-92 341.3 342 59.4
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 2.4e-91 339.3 345 58.6
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 3.2e-91 339.0 342 59.1
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 2.0e-90 336.3 342 57.6
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 1.7e-89 333.2 342 58.2
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 7.1e-83 311.2 342 55.8
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 1.7e-81 306.6 343 55.7
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 5.6e-80 301.6 343 55.7
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 7.3e-80 301.2 342 55.6
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 7.3e-80 301.2 342 55.6
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 1.1e-75 287.3 284 61.3
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 2.5e-64 249.6 346 48.0
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 7.7e-29 131.7 377 29.2
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 1.0e-28 131.3 396 29.5
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 8.5e-28 128.3 409 27.4
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 1.9e-27 127.1 396 28.3
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 1.9e-27 127.1 237 35.4
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 5.1e-25 119.0 400 26.8
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 8.8e-25 118.2 402 26.9
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 1.5e-24 117.5 404 26.2
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 2.0e-24 117.1 402 26.9
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 3.3e-24 116.3 349 27.8
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 7.4e-24 115.2 406 26.1
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 7.4e-24 115.2 332 28.6
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 7.4e-24 115.2 339 30.1
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 7.4e-24 115.2 402 26.6
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 9.7e-24 114.8 390 26.4
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 1.3e-23 114.4 405 25.9
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 1.7e-23 114.0 404 25.7
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.2e-23 113.6 344 29.1
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 2.8e-23 113.2 415 25.5
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 2.8e-23 113.2 420 26.4
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.7e-23 112.8 344 28.5
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 1.8e-22 110.5 356 29.2
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 3.1e-22 109.8 400 26.5
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 2.6e-21 106.7 340 28.2
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 5.9e-21 105.5 349 26.4
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 2.9e-20 103.2 420 25.2
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 2.9e-20 103.2 343 24.2
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 3.8e-20 102.8 338 26.6
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 5.0e-20 102.4 392 25.3
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 6.5e-20 102.1 282 29.1
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 1.9e-19 100.5 214 34.6
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 2.5e-19 100.1 153 39.2
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.5e-19 100.1 253 31.2
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 3.2e-19 99.8 253 31.2
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.2e-19 99.8 253 31.2
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 5.5e-19 99.0 349 27.5
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 9.4e-19 98.2 280 29.3
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 1.2e-18 97.8 338 27.8
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 1.6e-18 97.4 388 25.8
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 3.6e-18 96.3 350 28.0
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 4.7e-18 95.9 351 27.1
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.0e-17 94.7 202 33.7
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 1.8e-17 94.0 405 25.2
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 2.3e-17 93.6 304 26.6
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 3.9e-17 92.8 208 29.8
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.0e-16 90.5 375 26.4
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 5.7e-16 89.0 371 26.1
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 8.2e-15 85.1 160 33.1
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 7.0e-14 82.0 338 23.1
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 2.0e-13 80.5 436 22.5
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 1.2e-10 71.2 88 39.8
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.0e-09 68.2 396 23.2
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 1.4e-09 67.8 432 22.7
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 1.8e-09 67.4 250 25.2
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 1.5e-08 64.3 193 27.5
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 3.3e-08 63.2 150 30.7


User provided reference genes

Program Settings