Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 1.9e-127 459.1 222 100.0
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 2.1e-118 429.1 223 93.7
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.8e-117 426.0 223 92.8
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.8e-117 426.0 223 92.8
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.8e-117 426.0 223 92.8
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 2.5e-116 422.2 223 92.4
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 7.4e-116 420.6 223 91.9
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 1.8e-109 399.4 222 89.2
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 3.9e-109 398.3 222 87.8
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 2.9e-104 382.1 217 86.6
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 8.4e-104 380.6 217 86.2
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 1.4e-103 379.8 217 86.2
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 2.5e-103 379.0 217 86.2
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 2.1e-102 375.9 222 79.7
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 6.5e-80 301.2 221 65.6
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 5.5e-79 298.1 217 65.4
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 3.0e-77 292.4 229 62.9
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 3.0e-77 292.4 221 63.8
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 5.2e-77 291.6 222 62.6
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 6.7e-77 291.2 222 62.6
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 2.0e-76 289.7 220 63.2
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 3.3e-76 288.9 222 62.2
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 4.4e-76 288.5 222 62.2
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 5.7e-76 288.1 164 76.8
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 9.7e-76 287.3 223 62.3
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 6.3e-75 284.6 230 63.5
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 1.4e-74 283.5 228 63.2
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.4e-74 283.5 228 63.2
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 1.4e-74 283.5 222 63.1
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 1.2e-73 280.4 223 62.3
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 1.2e-73 280.4 227 61.7
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 2.0e-73 279.6 227 62.1
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 5.9e-73 278.1 218 60.1
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 7.7e-73 277.7 218 61.0
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 1.3e-72 276.9 169 72.8
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 2.9e-72 275.8 167 74.9
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 5.0e-72 275.0 242 57.0
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 6.5e-72 274.6 219 60.3
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 7.2e-71 271.2 169 71.0
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 9.4e-71 270.8 172 72.1
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 2.1e-70 269.6 164 75.0
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 1.0e-69 267.3 218 60.1
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.8e-69 266.5 177 70.1
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 3.0e-69 265.8 220 60.0
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 5.2e-69 265.0 219 56.6
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 6.8e-69 264.6 218 56.9
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 8.8e-69 264.2 164 71.3
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 5.7e-68 261.5 218 57.8
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.3e-67 260.4 218 55.5
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 1.3e-67 260.4 218 57.3
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 1.3e-67 260.4 164 69.5
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 2.2e-67 259.6 164 71.3
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 2.8e-67 259.2 164 71.3
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 2.8e-67 259.2 219 56.6
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 8.3e-67 257.7 221 57.9
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.4e-66 256.9 227 57.3
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.4e-66 256.9 227 57.3
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 1.4e-66 256.9 230 56.1
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 1.4e-66 256.9 172 66.9
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 1.8e-66 256.5 218 57.3
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.8e-66 256.5 164 68.3
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 2.4e-66 256.1 225 55.1
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 4.1e-66 255.4 166 68.7
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 7.0e-66 254.6 220 57.7
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 1.2e-65 253.8 224 60.3
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 7.7e-65 251.1 223 55.2
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 1.0e-64 250.8 216 56.5
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 1.3e-64 250.4 217 55.3
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 1.7e-64 250.0 166 71.1
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 1.7e-64 250.0 221 56.1
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 1.7e-64 250.0 219 53.9
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 1.7e-64 250.0 218 58.7
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 2.9e-64 249.2 226 54.0
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 1.5e-63 246.9 164 67.1
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 2.5e-63 246.1 180 63.9
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 5.5e-63 245.0 213 56.3
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 1.6e-62 243.4 213 54.0
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 1.8e-58 229.9 146 71.2
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 9.2e-58 227.6 330 43.0
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 4.5e-57 225.3 179 55.3
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 4.5e-57 225.3 172 59.9
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 4.3e-55 218.8 159 62.9
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 1.0e-53 214.2 125 74.4
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 1.4e-53 213.8 164 58.5
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 6.8e-53 211.5 179 57.5
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 1.6e-49 200.3 220 47.3
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 7.8e-49 198.0 104 82.7
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 2.3e-48 196.4 104 82.7
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.9e-47 193.4 224 46.9
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 4.4e-44 182.2 123 76.4
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 4.4e-44 182.2 110 72.7
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.2e-41 174.1 119 69.7
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.6e-41 173.7 163 52.8
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 8.9e-37 157.9 161 47.8
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 2.9e-35 152.9 217 42.9
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 5.2e-29 132.1 92 64.1
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 1.1e-26 124.4 80 72.5
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 3.9e-24 115.9 148 45.3
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 1.1e-23 114.4 119 50.4
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 4.7e-22 109.0 149 38.9
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 3.1e-21 106.3 131 43.5
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 1.6e-17 94.0 146 37.7
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 9.6e-15 84.7 147 36.7
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 2.0e-12 77.0 41 78.0


User provided reference genes

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