Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g07670 Schrenkiella parvula HOM05D001135 ORTHO05D001005 1.0e-139 500.0 239 100.0
BcaC05g29781 Brassica carinata HOM05D001135 ORTHO05D001005 1.2e-66 257.3 236 59.3
BcaC05g30088 Brassica carinata HOM05D001135 ORTHO05D001005 1.9e-56 223.4 206 58.7
BolC5t34805H Brassica oleracea HOM05D001135 ORTHO05D001005 1.9e-56 223.4 206 58.7
BraA05t22943Z Brassica rapa HOM05D001135 ORTHO05D001005 3.9e-54 215.7 206 57.8
C05p61470 Brassica napus HOM05D001135 ORTHO05D001005 6.6e-54 214.9 206 57.8
Thhalv10003428m.g Eutrema salsugineum HOM05D001135 ORTHO05D001005 1.4e-51 207.2 178 57.9
A03p34280 Brassica napus HOM05D001135 ORTHO05D001005 1.4e-48 197.2 223 54.7
BraA05t22015Z Brassica rapa HOM05D001135 ORTHO05D001005 2.4e-48 196.4 228 54.4
BraA03t12603Z Brassica rapa HOM05D001135 ORTHO05D001005 4.6e-47 192.2 228 54.8
C03p41730 Brassica napus HOM05D001135 ORTHO05D001005 1.3e-46 190.7 228 53.9
Carub.0003s0514 Capsella rubella HOM05D001135 ORTHO05D001005 7.3e-37 158.3 242 44.2
AL2G25290 Arabidopsis lyrata HOM05D001135 ORTHO05D001005 3.1e-35 152.9 224 44.6
AT1G54300 Arabidopsis thaliana HOM05D001135 ORTHO05D001005 1.7e-33 147.1 201 44.8
AL3G16510 Arabidopsis lyrata HOM05D001135 ORTHO05D001005 8.4e-33 144.8 239 43.9
AT3G05770 Arabidopsis thaliana HOM05D001135 ORTHO05D001005 8.4e-33 144.8 257 42.0
AL6G46290 Arabidopsis lyrata HOM05D001135 ORTHO05D001005 3.2e-32 142.9 211 43.1
Thhalv10002069m.g Eutrema salsugineum HOM05D001135 ORTHO05D001005 2.4e-24 116.7 90 63.3
BraA06t23479Z Brassica rapa HOM05D001135 ORTHO05D001005 1.0e-22 111.3 92 57.6
A06p02700 Brassica napus HOM05D001135 ORTHO05D001005 5.1e-22 109.0 92 56.5
BcaB07g33553 Brassica carinata HOM05D001135 ORTHO05D001005 1.6e-20 104.0 92 54.3
BcaC08g43278 Brassica carinata HOM05D001135 ORTHO05D001005 2.4e-19 100.1 94 54.3
C06p06280 Brassica napus HOM05D001135 ORTHO05D001005 2.4e-19 100.1 94 54.3
BolC6t35737H Brassica oleracea HOM05D001135 ORTHO05D001005 2.4e-19 100.1 94 54.3
Thhalv10022346m.g Eutrema salsugineum HOM05D001135 ORTHO05D001005 1.5e-13 80.9 120 40.0
DCAR_025281 Daucus carota HOM05D001135 ORTHO05D001005 8.5e-09 65.1 84 45.2
Haze_04064 Corylus avellana HOM05D001135 ORTHO05D001005 7.2e-08 62.0 102 37.3
PSO063G2732 Papaver somniferum HOM05D001135 ORTHO05D001005 1.6e-07 60.8 93 39.8
PSO832G3980 Papaver somniferum HOM05D001135 ORTHO05D001005 3.6e-07 59.7 93 38.7
Aqoxy5G03799 Aquilegia oxysepala HOM05D001135 ORTHO05D001005 4.6e-07 59.3 93 39.8
CSS0001856 Camellia sinensis var. sinensis HOM05D001135 ORTHO05D001005 6.1e-07 58.9 87 36.8
Oeu013211.1 Olea europaea HOM05D001135 ORTHO05D001005 1.0e-06 58.2 83 43.4
AL6G46420 Arabidopsis lyrata HOM05D001135 ORTHO05D001005 1.4e-06 57.8 39 64.1
Medtr1g084010 Medicago truncatula HOM05D001135 ORTHO05D001005 1.8e-06 57.4 83 38.6
PGR083G2129 Punica granatum HOM05D001135 ORTHO05D001005 3.0e-06 56.6 91 36.3
QL03p013486 Quercus lobata HOM05D001135 ORTHO05D001005 3.9e-06 56.2 76 39.5
MBI10_g00737_MAGBIO Magnolia biondii HOM05D001135 ORTHO05D001005 6.7e-06 55.5 90 37.8
Ca_10169_v3 Cicer arietinum L. HOM05D001135 ORTHO05D001005 8.8e-06 55.1 104 34.6


User provided reference genes

Program Settings