Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 4.2e-198 694.5 356 100.0
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 7.3e-182 640.6 356 91.6
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 5.2e-180 634.4 356 91.3
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 9.8e-179 630.2 356 89.9
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 9.8e-179 630.2 356 89.9
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 8.3e-178 627.1 332 92.5
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.6e-176 622.9 351 89.2
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 4.6e-176 621.3 351 87.5
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 7.3e-174 614.0 356 84.6
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.6e-173 612.8 344 87.2
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 2.8e-173 612.1 357 84.6
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 2.8e-165 585.5 336 85.4
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.0e-163 579.3 344 81.1
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 4.9e-146 521.5 316 80.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 7.4e-134 481.1 346 67.6
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.4e-132 476.9 327 70.3
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 4.0e-132 475.3 329 69.3
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.3e-132 474.9 327 70.0
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 5.3e-132 474.9 350 66.9
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.9e-132 474.6 327 69.7
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.0e-132 474.2 327 70.0
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.5e-131 471.9 323 70.0
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 5.8e-131 471.5 327 70.0
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 2.2e-130 469.5 327 69.7
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 3.8e-130 468.8 316 71.2
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 4.9e-130 468.4 327 69.4
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.4e-129 466.8 325 68.9
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 2.5e-129 466.1 322 68.6
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 7.1e-129 464.5 321 69.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 7.1e-129 464.5 316 70.9
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.6e-128 463.4 317 70.7
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.1e-128 463.0 319 69.0
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 2.7e-128 462.6 322 68.0
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 2.7e-128 462.6 321 68.8
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 3.5e-128 462.2 316 71.2
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 4.6e-128 461.8 320 68.8
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 7.9e-128 461.1 351 65.5
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 7.9e-128 461.1 343 65.6
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.8e-127 459.9 316 69.6
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 5.1e-127 458.4 316 69.3
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.1e-126 457.2 324 68.2
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.5e-126 456.1 321 67.3
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 3.3e-126 455.7 317 68.8
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 5.7e-126 454.9 328 67.7
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 9.6e-126 454.1 320 67.8
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 9.6e-126 454.1 321 66.7
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.3e-125 453.8 341 66.6
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 8.2e-125 451.1 323 67.5
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.4e-124 450.3 322 67.1
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 3.1e-124 449.1 327 65.1
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.1e-124 448.7 346 64.5
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 5.3e-124 448.4 322 67.7
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 6.9e-124 448.0 316 68.0
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.0e-124 447.6 323 68.1
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.5e-123 446.8 319 67.7
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 2.6e-123 446.0 321 67.0
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 3.4e-123 445.7 308 68.5
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.5e-123 445.3 324 65.7
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 5.8e-123 444.9 322 65.5
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 7.6e-123 444.5 324 66.4
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 2.2e-122 443.0 326 66.0
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.9e-122 442.6 322 65.8
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 8.4e-122 441.0 325 68.0
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.1e-121 440.7 320 66.6
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.1e-121 440.7 322 65.5
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.4e-121 440.3 317 66.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 2.5e-121 439.5 322 65.5
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 6.1e-120 434.9 327 63.9
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.8e-119 433.3 325 64.9
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.3e-119 433.0 322 63.0
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 3.9e-119 432.2 316 65.2
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.1e-119 431.8 312 65.1
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 8.7e-119 431.0 320 65.0
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.1e-118 430.6 320 63.1
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 3.3e-118 429.1 308 65.3
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.7e-118 427.6 319 63.0
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 4.8e-117 425.2 322 62.4
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 4.8e-117 425.2 322 62.7
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 6.9e-116 421.4 321 66.4
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.6e-115 419.5 322 64.6
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.7e-114 416.8 317 63.1
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.9e-114 416.0 317 61.2
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.9e-113 413.3 313 63.9
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.6e-112 409.1 321 62.6
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 3.9e-111 405.6 321 61.4
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 6.7e-111 404.8 323 61.0
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.0e-110 403.3 323 63.5
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.0e-103 379.4 320 58.8
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 2.2e-101 373.2 317 57.4
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 2.0e-94 350.1 320 56.6
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 1.1e-92 344.4 318 54.4
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.8e-92 343.6 280 62.5
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.8e-92 343.6 309 56.0
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.5e-81 307.4 307 53.4
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.2e-81 306.2 305 52.1
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.2e-80 304.3 203 71.9
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 4.7e-80 302.4 316 48.4
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.5e-75 286.2 201 66.7
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 7.7e-75 285.0 235 60.4
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.4e-68 264.2 197 65.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 4.3e-65 252.7 187 62.6
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.1e-63 246.5 161 74.5
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 6.0e-59 232.3 157 69.4
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.9e-58 229.6 134 79.9
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 1.9e-57 227.3 174 63.2
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.6e-51 206.1 156 65.4
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.7e-50 204.1 282 44.3
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 4.0e-47 193.0 245 45.7
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.0e-42 178.3 139 61.2
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.7e-37 161.0 123 65.0
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 6.4e-37 159.1 90 80.0
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 9.6e-33 145.2 135 55.6
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.8e-23 114.4 111 53.2
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.7e-18 95.9 92 50.0
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.7e-18 95.5 72 63.9
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 2.0e-14 84.3 156 37.2
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 3.4e-14 83.6 172 33.7
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 6.5e-13 79.3 70 55.7
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 4.1e-07 60.1 175 29.7
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 9.0e-07 58.9 173 30.6
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.0e-05 55.5 151 26.5


User provided reference genes

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