Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g06440 Schrenkiella parvula HOM05D001972 ORTHO05D371397 9.7e-112 406.8 195 100.0
Sp1g40830 Schrenkiella parvula HOM05D001972 ORTHO05D002555 7.1e-14 81.6 79 50.6
Sp4g01540 Schrenkiella parvula HOM05D001972 ORTHO05D002555 1.1e-11 74.3 86 47.7
BcaB08g35081 Brassica carinata HOM05D001972 ORTHO05D002555 1.9e-11 73.6 79 53.2
A09p57490 Brassica napus HOM05D001972 ORTHO05D002555 9.6e-11 71.2 68 52.9
BraA09t41140Z Brassica rapa HOM05D001972 ORTHO05D002555 9.6e-11 71.2 68 52.9
C06p38610 Brassica napus HOM05D001972 ORTHO05D002555 6.2e-10 68.6 78 52.6
BolC8t51627H Brassica oleracea HOM05D001972 ORTHO05D002555 1.4e-09 67.4 72 52.8
BcaC07g41061 Brassica carinata HOM05D001972 ORTHO05D002555 1.8e-09 67.0 72 52.8
C08p40600 Brassica napus HOM05D001972 ORTHO05D002555 1.8e-09 67.0 72 52.8
BraA07t30875Z Brassica rapa HOM05D001972 ORTHO05D002555 4.0e-09 65.9 70 51.4
Thhalv10000084m.g Eutrema salsugineum HOM05D001972 ORTHO05D002555 4.0e-09 65.9 76 46.1
A07p32510 Brassica napus HOM05D001972 ORTHO05D002555 6.9e-09 65.1 70 51.4
AT1G57820 Arabidopsis thaliana HOM05D001972 ORTHO05D002555 9.0e-09 64.7 76 46.1
Carub.0002s0671 Capsella rubella HOM05D001972 ORTHO05D002555 9.0e-09 64.7 80 46.2
BcaB03g15365 Brassica carinata HOM05D001972 ORTHO05D002555 2.0e-08 63.5 84 46.4
BolC6t38952H Brassica oleracea HOM05D001972 ORTHO05D002555 2.6e-08 63.2 70 50.0
AL2G18730 Arabidopsis lyrata HOM05D001972 ORTHO05D002555 4.5e-08 62.4 71 49.3
Cpa.g.c43701 Carica papaya HOM05D001972 ORTHO05D002555 4.5e-08 62.4 81 43.2
Carub.0002s0672 Capsella rubella HOM05D001972 ORTHO05D002555 1.3e-07 60.8 92 45.7
CARHR044770 Cardamine hirsuta HOM05D001972 ORTHO05D002555 2.2e-07 60.1 64 50.0
Thhalv10000657m.g Eutrema salsugineum HOM05D001972 ORTHO05D002555 2.9e-07 59.7 63 49.2
THA.LOC104809840 Tarenaya hassleriana HOM05D001972 ORTHO05D002555 4.9e-07 58.9 75 42.7
CARHR058000 Cardamine hirsuta HOM05D001972 ORTHO05D002555 8.4e-07 58.2 61 50.8
CARHR183080 Cardamine hirsuta HOM05D001972 ORTHO05D002555 8.4e-07 58.2 64 50.0
Gohir.D11G003600 Gossypium hirsutum HOM05D001972 ORTHO05D002555 3.2e-06 56.2 76 44.7
THA.LOC104820364 Tarenaya hassleriana HOM05D001972 ORTHO05D002555 3.2e-06 56.2 68 44.1
Gohir.A11G004100 Gossypium hirsutum HOM05D001972 ORTHO05D002555 4.2e-06 55.8 74 45.9
Actinidia18298 Actinidia chinensis HOM05D001972 ORTHO05D002555 5.5e-06 55.5 88 39.8
Aqoxy3G04135 Aquilegia oxysepala HOM05D001972 ORTHO05D002555 9.3e-06 54.7 110 36.4
Gorai.007G004600 Gossypium raimondii HOM05D001972 ORTHO05D002555 9.3e-06 54.7 74 44.6


User provided reference genes

Program Settings