Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.3e-54 216.1 104 100.0
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 4.2e-53 211.1 104 97.1
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 97.1
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 97.1
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 97.1
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 1.6e-52 209.1 104 96.2
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 2.7e-52 208.4 104 96.2
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 1.3e-51 206.1 104 95.2
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 3.9e-51 204.5 104 92.3
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 5.1e-51 204.1 104 93.3
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 6.2e-49 197.2 104 89.4
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 4.0e-48 194.5 104 88.5
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 5.3e-48 194.1 104 88.5
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 9.0e-48 193.4 104 89.4
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 2.6e-47 191.8 104 84.6
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 3.9e-43 177.9 96 84.4
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 8.7e-43 176.8 96 83.3
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 1.5e-42 176.0 96 83.3
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 3.3e-42 174.9 96 82.3
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 3.3e-42 174.9 94 85.1
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 3.3e-42 174.9 96 83.3
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 3.3e-42 174.9 96 83.3
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 4.3e-42 174.5 94 85.1
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 9.6e-42 173.3 94 84.0
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 1.3e-41 172.9 94 83.0
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 1.6e-41 172.6 96 82.3
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 1.6e-41 172.6 96 82.3
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.6e-41 172.6 96 81.2
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 2.1e-41 172.2 96 81.2
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 2.1e-41 172.2 96 80.2
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 2.8e-41 171.8 93 83.9
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 2.8e-41 171.8 96 83.3
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 2.8e-41 171.8 94 81.9
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 2.8e-41 171.8 94 81.9
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 3.6e-41 171.4 94 83.0
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 4.8e-41 171.0 96 80.2
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 4.8e-41 171.0 96 79.2
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 4.8e-41 171.0 94 81.9
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 4.8e-41 171.0 96 80.2
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 6.2e-41 170.6 96 81.2
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 6.2e-41 170.6 94 81.9
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 8.1e-41 170.2 97 80.4
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 1.4e-40 169.5 96 79.2
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 1.4e-40 169.5 94 80.9
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 2.4e-40 168.7 94 80.9
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 79.2
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 79.2
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 80.2
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 80.2
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 80.2
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 81.2
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 79.2
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 78.1
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 80.2
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 6.9e-40 167.2 96 77.1
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 9.0e-40 166.8 95 81.1
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 9.0e-40 166.8 96 78.1
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 1.2e-39 166.4 96 78.1
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 1.2e-39 166.4 96 78.1
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 1.2e-39 166.4 96 78.1
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 1.5e-39 166.0 98 77.6
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 2.0e-39 165.6 96 77.1
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 2.0e-39 165.6 96 79.2
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 2.6e-39 165.2 96 78.1
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 2.6e-39 165.2 94 76.6
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 5.8e-39 164.1 96 77.1
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 7.6e-39 163.7 96 78.1
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 7.6e-39 163.7 93 79.6
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 7.6e-39 163.7 96 76.0
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 9.9e-39 163.3 93 80.6
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 76.0
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 1.3e-38 162.9 96 76.0
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 1.7e-38 162.5 96 76.0
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 1.7e-38 162.5 96 76.0
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 1.7e-38 162.5 93 78.5
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 1.7e-38 162.5 93 78.5
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 1.7e-38 162.5 96 76.0
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 2.2e-38 162.2 96 77.1
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 2.2e-38 162.2 96 77.1
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 2.2e-38 162.2 96 75.0
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 2.9e-38 161.8 96 75.0
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 4.9e-38 161.0 94 76.6
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 6.4e-38 160.6 96 75.0
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 6.4e-38 160.6 94 76.6
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 1.1e-37 159.8 94 74.5
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 1.9e-37 159.1 96 75.0
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.2e-37 158.3 96 76.0
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 4.2e-37 157.9 96 74.0
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 7.1e-37 157.1 91 76.9
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 7.1e-37 157.1 93 78.5
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 9.3e-37 156.8 96 74.0
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 1.2e-36 156.4 96 72.9
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 4.6e-36 154.5 99 68.7
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 7.9e-36 153.7 94 75.5
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 1.0e-35 153.3 111 67.6
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 1.0e-35 153.3 94 74.5
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 1.0e-35 153.3 94 74.5
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 5.1e-35 151.0 114 64.0
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 5.1e-35 151.0 119 63.9
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 5.1e-35 151.0 119 63.9
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 5.1e-35 151.0 119 63.9
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 6.7e-35 150.6 129 58.9
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 1.5e-34 149.4 96 71.9
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 1.1e-32 143.3 139 52.5
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 1.1e-32 143.3 139 52.5
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 5.3e-32 141.0 96 71.9
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 1.5e-31 139.4 84 72.6
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 9.3e-29 130.2 96 66.7
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 6.0e-28 127.5 72 79.2
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 1.7e-22 109.4 94 54.3
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 1.1e-21 106.7 93 53.8
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 5.7e-18 94.4 50 80.0
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 5.7e-18 94.4 50 80.0
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 1.1e-16 90.1 50 76.0
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 1.5e-15 86.3 59 66.1
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 5.9e-15 84.3 49 75.5
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 7.7e-15 84.0 53 71.7
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 5.0e-14 81.3 39 97.4
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 6.5e-14 80.9 47 76.6
Potri.013G002301 Populus trichocarpa HOM05D006309 ORTHO05D007937 8.2e-09 63.9 41 73.2


User provided reference genes

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