Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 0.0e+00 1092.8 535 100.0
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 0.0e+00 1092.8 535 100.0
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 9.6e-295 1016.1 535 91.6
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 8.4e-291 1003.0 528 92.0
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 2.4e-290 1001.5 530 91.1
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 5.6e-287 990.3 528 90.7
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 5.6e-287 990.3 553 88.1
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 7.3e-287 989.9 528 90.7
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 9.6e-287 989.6 532 88.7
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 3.1e-285 984.6 535 88.6
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 6.4e-283 976.9 552 86.8
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 2.4e-282 974.9 535 88.4
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 2.3e-280 968.4 535 87.5
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 4.6e-257 891.0 523 81.8
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 6.9e-245 850.5 543 77.3
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 4.1e-229 798.1 522 69.9
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 1.6e-228 796.2 526 68.8
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 2.9e-227 792.0 521 70.2
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 2.9e-227 792.0 527 69.1
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 3.8e-227 791.6 513 70.8
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 3.8e-227 791.6 527 67.6
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 6.5e-227 790.8 526 68.1
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 1.9e-226 789.3 520 69.8
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 5.5e-226 787.7 520 69.4
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 2.7e-225 785.4 527 68.7
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 4.0e-224 781.6 513 70.4
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 1.5e-223 779.6 517 69.8
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 2.0e-223 779.2 517 69.6
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 3.4e-223 778.5 526 67.9
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 3.4e-223 778.5 517 69.1
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 4.4e-223 778.1 521 68.7
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 4.4e-223 778.1 519 70.1
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 5.7e-223 777.7 517 68.1
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 7.5e-223 777.3 517 67.9
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 9.8e-223 776.9 517 69.6
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 1.7e-222 776.2 517 68.3
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.7e-222 775.0 542 66.6
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 4.8e-222 774.6 531 67.0
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 6.3e-222 774.2 519 69.0
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 4.1e-221 771.5 520 68.1
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 2.2e-219 765.8 529 67.3
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 3.8e-219 765.0 517 67.3
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 5.0e-219 764.6 527 66.4
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 1.9e-218 762.7 520 67.9
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 2.5e-218 762.3 524 66.8
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 3.2e-218 761.9 545 65.5
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 4.2e-218 761.5 516 67.4
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 6.1e-217 757.7 584 62.2
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 8.0e-217 757.3 519 67.6
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 1.0e-216 756.9 517 67.1
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 5.2e-216 754.6 520 66.3
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 1.2e-215 753.4 517 67.5
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 2.6e-215 752.3 522 65.9
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 4.4e-215 751.5 513 68.2
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 9.8e-215 750.4 523 65.0
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 3.7e-214 748.4 513 67.8
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 2.4e-213 745.7 517 66.9
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 2.4e-213 745.7 486 70.4
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 2.4e-213 745.7 513 67.8
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 4.1e-213 745.0 523 64.8
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 5.0e-211 738.0 513 67.4
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 8.6e-211 737.3 517 66.5
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 1.5e-210 736.5 468 72.2
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 1.5e-210 736.5 530 64.5
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 1.9e-210 736.1 516 65.7
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 3.3e-210 735.3 527 63.9
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 3.3e-210 735.3 532 64.8
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 3.3e-210 735.3 533 65.1
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 1.2e-209 733.4 519 65.5
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 2.1e-209 732.6 523 66.9
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 5.7e-207 724.5 515 65.8
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 3.7e-206 721.8 502 66.1
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 1.2e-204 716.8 492 67.5
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 9.5e-202 707.2 519 64.5
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 6.2e-201 704.5 557 60.7
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 1.5e-199 699.9 508 65.7
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 1.3e-195 686.8 515 62.1
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 3.3e-194 682.2 522 62.6
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 8.1e-193 677.6 515 61.4
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 2.3e-192 676.0 521 61.0
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 9.9e-191 670.6 522 63.4
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 2.4e-189 666.0 516 62.8
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 3.9e-187 658.7 527 59.2
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.5e-186 656.8 523 61.4
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 7.3e-186 654.4 686 48.8
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 6.2e-185 651.4 437 68.2
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.8e-184 649.8 543 58.6
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 5.2e-184 648.3 597 54.8
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 1.2e-183 647.1 397 73.8
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 1.5e-183 646.7 442 68.1
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 1.6e-177 626.7 504 60.7
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 6.2e-177 624.8 391 72.1
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.2e-175 620.5 578 54.5
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 8.4e-174 614.4 498 60.2
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 3.9e-171 605.5 522 56.7
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 4.3e-170 602.1 418 65.6
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 1.3e-161 573.9 528 52.1
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 5.8e-159 565.1 528 53.2
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 1.3e-158 563.9 492 58.5
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 6.5e-150 535.0 365 66.8
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 1.4e-144 517.3 520 51.0
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 1.2e-143 514.2 329 72.0
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.6e-140 503.8 520 51.0
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.3e-134 484.2 307 71.3
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 9.4e-133 478.0 347 66.0
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 1.0e-131 474.6 517 47.4
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 3.1e-128 463.0 545 43.7
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 3.8e-126 456.1 284 71.8
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 1.9e-125 453.8 443 48.5
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 3.7e-121 439.5 341 62.2
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 3.7e-121 439.5 357 59.7
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 2.0e-114 417.2 254 72.4
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 2.7e-103 380.2 224 74.6
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 2.7e-103 380.2 224 74.6
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 3.5e-103 379.8 230 73.5
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 3.8e-102 376.3 228 73.2
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 7.2e-101 372.1 287 60.6
GSVIVG01007210001 Vitis vinifera HOM05D004979 ORTHO05D006190 5.2e-75 286.2 206 64.6
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 1.2e-74 285.0 530 34.7
GSVIVG01007430001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.2e-74 285.0 219 61.6
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 4.4e-74 283.1 159 77.4
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 2.1e-71 274.2 241 58.9
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 1.7e-70 271.2 561 32.4
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 8.1e-68 262.3 534 33.3
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 1.9e-64 251.1 541 34.0
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 1.6e-63 248.1 495 34.7
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 7.8e-63 245.7 171 65.5
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 1.1e-56 225.3 207 54.1
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.7e-54 218.0 353 39.4
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 1.5e-45 188.3 252 42.1
ClCG03G002030 Citrullus lanatus HOM05D004979 ORTHO05D006190 4.9e-41 173.3 163 53.4
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 1.6e-36 158.3 338 31.4
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 5.5e-32 143.3 85 70.6
GSVIVG01004371001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.2e-31 142.1 103 68.0
CDE04G1277 Ceratophyllum demersum HOM05D004979 ORTHO05D006190 6.7e-30 136.3 99 63.6
QL03p011256 Quercus lobata HOM05D004979 ORTHO05D006190 2.2e-25 121.3 77 74.0
Actinidia27722 Actinidia chinensis HOM05D004979 ORTHO05D006190 6.5e-25 119.8 193 37.8
MBI07_g39750_MAGBIO Magnolia biondii HOM05D004979 ORTHO05D006190 1.1e-24 119.0 110 53.6
Lsat_1_v5_gn_8_74741 Lactuca sativa HOM05D004979 ORTHO05D006190 2.5e-24 117.9 93 63.4
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 1.0e-22 112.5 121 45.5
FAN19G1386 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.3e-21 107.5 86 59.3
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 4.5e-18 97.1 271 30.3
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 2.0e-10 71.6 51 54.9
AagrBONN_evm.TU.Sc2ySwM_117.715 Anthoceros agrestis HOM05D004979 ORTHO05D006190 1.9e-08 65.1 95 38.9
SHI20227 Sapria himalayana HOM05D004979 ORTHO05D006190 2.5e-08 64.7 51 56.9
CBR_g72775 Chara braunii HOM05D004979 ORTHO05D132771 1.2e-07 62.4 79 38.0
Medtr3g085120 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-07 62.0 117 32.5
FAN23G1107 Fragaria x ananassa HOM05D003102 ORTHO05D005239 1.0e-06 59.3 44 61.4


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