Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g05130 Schrenkiella parvula HOM05D014607 ORTHO05D016575 6.1e-97 357.5 176 100.0
Thhalv10023721m.g Eutrema salsugineum HOM05D014607 ORTHO05D016575 3.5e-84 315.1 174 87.4
AL2G17750 Arabidopsis lyrata HOM05D014607 ORTHO05D016575 1.6e-73 279.6 182 77.5
CARHR283950 Cardamine hirsuta HOM05D014607 ORTHO05D016575 4.0e-72 275.0 179 77.7
AT1G58460 Arabidopsis thaliana HOM05D014607 ORTHO05D016575 4.4e-71 271.6 176 78.4
Carub.0002s0605 Capsella rubella HOM05D014607 ORTHO05D016575 5.4e-69 264.6 176 77.3
BolC9t55186H Brassica oleracea HOM05D014607 ORTHO05D016575 2.3e-59 232.6 175 71.4
BraA09t37456Z Brassica rapa HOM05D014607 ORTHO05D016575 3.3e-58 228.8 175 71.4
C09p22700 Brassica napus HOM05D014607 ORTHO05D016575 6.4e-38 161.4 166 56.0
THA.LOC104819947 Tarenaya hassleriana HOM05D014607 ORTHO05D016575 1.1e-16 90.9 115 51.3
VMungo0647G1017 Vigna mungo HOM05D002412 ORTHO05D002516 1.1e-10 70.9 183 34.4
Lj5g0023078 Lotus japonicus HOM05D002412 ORTHO05D002516 1.5e-10 70.5 182 36.3
Ciclev10002703m.g Citrus clementina HOM05D002412 ORTHO05D002516 5.6e-10 68.6 141 37.6
Psat0ss7070g0040 Pisum sativum HOM05D002412 ORTHO05D002516 5.6e-10 68.6 120 40.8
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 5.6e-10 68.6 184 34.8
QL12p038263 Quercus lobata HOM05D002412 ORTHO05D002516 7.4e-10 68.2 183 37.2
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 9.6e-10 67.8 187 35.8
COL.COLO4_28483 Corchorus olitorius HOM05D002412 ORTHO05D002516 1.6e-09 67.0 128 39.1
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 3.7e-09 65.9 172 35.5
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 4.8e-09 65.5 185 33.0
C07p59890 Brassica napus HOM05D002412 ORTHO05D002516 1.1e-08 64.3 158 33.5
BolC7t46433H Brassica oleracea HOM05D002412 ORTHO05D002516 1.1e-08 64.3 158 33.5
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 1.4e-08 63.9 153 36.6
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 1.8e-08 63.5 164 32.9
Phvul.001G028800 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 1.8e-08 63.5 177 35.6
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 3.1e-08 62.8 166 32.5
Nitab4.5_0003725g0030 Nicotiana tabacum HOM05D002412 ORTHO05D002516 3.1e-08 62.8 161 34.8
QL93p0154_0003 Quercus lobata HOM05D002412 ORTHO05D002516 3.1e-08 62.8 195 34.9
A03p62330 Brassica napus HOM05D002412 ORTHO05D002516 5.3e-08 62.0 157 35.0
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 5.3e-08 62.0 157 35.0
TPR.G33675 Trifolium pratense HOM05D002412 ORTHO05D002516 5.3e-08 62.0 193 34.7
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 6.9e-08 61.6 155 39.4
CANSAT25G2021 Cannabis sativa HOM05D002412 ORTHO05D002516 6.9e-08 61.6 155 33.5
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 9.0e-08 61.2 125 37.6
Glyma.14G089039 Glycine max HOM05D002412 ORTHO05D002516 9.0e-08 61.2 181 34.8
Actinidia10209 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.5e-07 60.5 156 37.2
Lalb_Chr11g0062941 Lupinus albus HOM05D002412 ORTHO05D002516 1.5e-07 60.5 163 36.8
Medtr1g017890 Medicago truncatula HOM05D002412 ORTHO05D002516 1.5e-07 60.5 160 36.9
A01p04520 Brassica napus HOM05D002412 ORTHO05D002516 2.0e-07 60.1 148 37.2
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 2.0e-07 60.1 171 35.7
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 2.0e-07 60.1 194 28.4
CiPaw.08G050800 Carya illinoinensis HOM05D002412 ORTHO05D002516 2.6e-07 59.7 186 35.5
Gohir.A05G210800 Gossypium hirsutum HOM05D002412 ORTHO05D002516 2.6e-07 59.7 153 35.3
Ca_13210_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 3.4e-07 59.3 115 40.0
TWI12G0333 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 3.4e-07 59.3 189 33.3
Cc00_g17020 Coffea canephora HOM05D002412 ORTHO05D002516 4.5e-07 58.9 119 39.5
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.5e-07 58.9 153 35.3
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 5.8e-07 58.5 148 34.5
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 5.8e-07 58.5 163 35.0
C01p04900 Brassica napus HOM05D002412 ORTHO05D002516 7.6e-07 58.2 148 36.5
BolC1t00474H Brassica oleracea HOM05D002412 ORTHO05D002516 7.6e-07 58.2 148 36.5
BraA01t00437Z Brassica rapa HOM05D002412 ORTHO05D002516 7.6e-07 58.2 148 36.5
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 7.6e-07 58.2 125 38.4
BcaC09g52190 Brassica carinata HOM05D002412 ORTHO05D002516 9.9e-07 57.8 119 40.3
DCAR_029176 Daucus carota HOM05D002412 ORTHO05D002516 9.9e-07 57.8 114 37.7
BcaNung04670 Brassica carinata HOM05D002412 ORTHO05D002516 1.3e-06 57.4 158 33.5
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 1.3e-06 57.4 110 39.1
Rhsim05G0091500 Rhododendron simsii HOM05D002412 ORTHO05D002516 1.3e-06 57.4 117 36.8
Cpa.g.sc142.41 Carica papaya HOM05D002412 ORTHO05D002516 1.7e-06 57.0 134 36.6
Glyma.17G234000 Glycine max HOM05D002412 ORTHO05D002516 1.7e-06 57.0 182 33.0
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 1.7e-06 57.0 148 34.5
Dinv44944 Davidia involucrata HOM05D002412 ORTHO05D002516 2.2e-06 56.6 149 35.6
Glyma.04G046600 Glycine max HOM05D002412 ORTHO05D002516 2.2e-06 56.6 119 38.7
CARHR241890 Cardamine hirsuta HOM05D002412 ORTHO05D002516 2.9e-06 56.2 121 38.8
TPR.G13172 Trifolium pratense HOM05D002412 ORTHO05D002516 2.9e-06 56.2 120 42.5
Cc10_g05040 Coffea canephora HOM05D002412 ORTHO05D002516 4.9e-06 55.5 127 43.3
Duzib093G1945 Durio zibethinus HOM05D002412 ORTHO05D002516 4.9e-06 55.5 126 35.7
Nitab4.5_0000497g0080 Nicotiana tabacum HOM05D002412 ORTHO05D002516 4.9e-06 55.5 141 35.5
Sed0022600 Sechium edule HOM05D002412 ORTHO05D002516 4.9e-06 55.5 159 34.0
PGSC0003DMG400010615 Solanum tuberosum HOM05D002412 ORTHO05D002516 4.9e-06 55.5 143 32.9
unitig_46.g17922 Utricularia gibba HOM05D001230 ORTHO05D001067 4.9e-06 55.5 122 33.6
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 6.4e-06 55.1 115 35.7
Lalb_Chr06g0165021 Lupinus albus HOM05D002412 ORTHO05D002516 6.4e-06 55.1 118 37.3
PSO170G3219 Papaver somniferum HOM05D002412 ORTHO05D002516 6.4e-06 55.1 124 36.3
Sabra14G0009000 Salix brachista HOM05D002412 ORTHO05D002516 6.4e-06 55.1 99 39.4
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 8.4e-06 54.7 117 39.3


User provided reference genes

Program Settings