Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g04880 Schrenkiella parvula HOM05D007484 ORTHO05D008290 3.8e-196 688.0 338 100.0
Sp2g04890 Schrenkiella parvula HOM05D007484 ORTHO05D008290 2.3e-113 412.9 401 58.9
Thhalv10024022m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 1.4e-102 377.1 447 49.9
Thhalv10023845m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 9.5e-99 364.4 428 49.5
Thhalv10024043m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 1.3e-95 354.0 447 48.8
Thhalv10023878m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 3.8e-95 352.4 449 48.6
Thhalv10023885m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 6.4e-95 351.7 448 46.9
Thhalv10024036m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 6.6e-92 341.7 439 48.3
BolC1t03792H Brassica oleracea HOM05D007484 ORTHO05D008290 1.2e-88 330.9 446 44.8
C06p16440 Brassica napus HOM05D007484 ORTHO05D008290 7.6e-88 328.2 446 45.5
BolC6t36847H Brassica oleracea HOM05D007484 ORTHO05D008290 7.6e-88 328.2 446 45.5
C01p38280 Brassica napus HOM05D007484 ORTHO05D008290 1.7e-87 327.0 446 44.8
A01p30140 Brassica napus HOM05D007484 ORTHO05D008290 1.9e-86 323.6 328 54.0
BraA01t03152Z Brassica rapa HOM05D007484 ORTHO05D008290 7.1e-86 321.6 446 44.8
Sp2g03170 Schrenkiella parvula HOM05D007484 ORTHO05D008290 1.6e-85 320.5 419 44.9
BolC1t03787H Brassica oleracea HOM05D007484 ORTHO05D008290 3.9e-84 315.8 331 52.6
AL2G15000 Arabidopsis lyrata HOM05D007484 ORTHO05D008290 2.8e-82 309.7 442 43.7
C06p16450 Brassica napus HOM05D007484 ORTHO05D008290 4.8e-82 308.9 313 53.4
BolC6t36848H Brassica oleracea HOM05D007484 ORTHO05D008290 4.8e-82 308.9 313 53.4
Thhalv10023947m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 9.0e-81 304.7 315 54.3
BcaC08g44240 Brassica carinata HOM05D007484 ORTHO05D008290 1.2e-80 304.3 434 45.2
Thhalv10023802m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 2.0e-80 303.5 421 44.9
A01p30150 Brassica napus HOM05D007484 ORTHO05D008290 5.8e-80 302.0 305 54.8
Thhalv10024091m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 6.4e-79 298.5 303 56.8
BcaC08g44241 Brassica carinata HOM05D007484 ORTHO05D008290 9.3e-78 294.7 422 43.8
Carub.0002s1064 Capsella rubella HOM05D007484 ORTHO05D008290 9.3e-78 294.7 335 51.6
AL2G15010 Arabidopsis lyrata HOM05D007484 ORTHO05D008290 1.6e-77 293.9 441 43.3
AT1G61320 Arabidopsis thaliana HOM05D007484 ORTHO05D008290 1.8e-76 290.4 442 42.1
Carub.0002s1106 Capsella rubella HOM05D007484 ORTHO05D008290 2.8e-74 283.1 444 41.2
AT1G61330 Arabidopsis thaliana HOM05D007484 ORTHO05D008290 3.1e-73 279.6 442 41.4
Carub.0002s1104 Capsella rubella HOM05D007484 ORTHO05D008290 4.0e-73 279.3 444 41.2
Carub.0005s0816 Capsella rubella HOM05D007484 ORTHO05D008290 3.9e-68 262.7 442 39.8
Thhalv10023839m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 1.6e-66 257.3 286 52.1
C01p38250 Brassica napus HOM05D007484 ORTHO05D008290 3.8e-63 246.1 351 43.3
CARHR051310 Cardamine hirsuta HOM05D007484 ORTHO05D008290 2.3e-60 236.9 300 47.7
Carub.0002s1107 Capsella rubella HOM05D007484 ORTHO05D008290 4.1e-57 226.1 303 44.9
BcaB04g20332 Brassica carinata HOM05D007484 ORTHO05D008290 6.9e-49 198.7 287 42.9
THA.LOC104809547 Tarenaya hassleriana HOM05D007484 ORTHO05D008290 1.9e-46 190.7 323 33.1
BraA01t03151Z Brassica rapa HOM05D007484 ORTHO05D008290 2.9e-39 166.8 209 45.5
Thhalv10023890m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 1.4e-36 157.9 117 66.7
Aa31LG2G9340 Aethionema arabicum HOM05D007484 ORTHO05D008290 8.2e-34 148.7 333 33.9
Dinv40482 Davidia involucrata HOM05D007484 ORTHO05D008290 1.3e-31 141.4 302 31.5
CARHR053380 Cardamine hirsuta HOM05D007484 ORTHO05D008290 1.7e-31 141.0 207 46.4
Haze_06572 Corylus avellana HOM05D007484 ORTHO05D008290 3.3e-27 126.7 367 26.7
Cfa000354 Carpinus fangiana HOM05D007484 ORTHO05D008290 3.7e-26 123.2 367 26.4
PGR004G1436 Punica granatum HOM05D007484 ORTHO05D008290 3.7e-26 123.2 364 25.0
Sabra11G0029500 Salix brachista HOM05D007484 ORTHO05D008290 3.7e-26 123.2 293 30.7
QL04p018320 Quercus lobata HOM05D007484 ORTHO05D008290 1.1e-25 121.7 359 28.1
Potri.004G034500 Populus trichocarpa HOM05D007484 ORTHO05D008290 1.4e-25 121.3 307 27.0
Potri.011G042900 Populus trichocarpa HOM05D007484 ORTHO05D008290 7.0e-25 119.0 336 28.9
Eucgr.D00711 Eucalyptus grandis HOM05D007484 ORTHO05D008290 7.7e-24 115.5 331 26.9
Rhsim13G0170100 Rhododendron simsii HOM05D007484 ORTHO05D008290 1.3e-23 114.8 329 26.7
Actinidia26998 Actinidia chinensis HOM05D007484 ORTHO05D008290 2.5e-22 110.5 279 29.7
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 1.6e-21 107.8 336 28.0
Duzib192G0019 Durio zibethinus HOM05D007484 ORTHO05D008290 2.7e-21 107.1 240 29.6
Peaxi162Scf00083g00015 Petunia axillaris HOM05D007484 ORTHO05D008290 2.3e-20 104.0 346 25.1
VMungo0540G2082 Vigna mungo HOM05D007484 ORTHO05D008290 1.3e-18 98.2 317 24.6
Atru.chr10.2009 Acer truncatum HOM05D007484 ORTHO05D008290 1.7e-18 97.8 311 25.4
Peaxi162Scf00149g00517 Petunia axillaris HOM05D007484 ORTHO05D008290 1.7e-18 97.8 354 25.4
Prupe.4G036700 Prunus persica HOM05D007484 ORTHO05D008290 3.7e-18 96.7 320 27.2
Medtr4g088845 Medicago truncatula HOM05D007484 ORTHO05D008290 4.8e-18 96.3 291 27.8
TAR626G0438 Trochodendron aralioides HOM05D007484 ORTHO05D008290 6.3e-18 95.9 351 26.5
TWI63G0466 Tripterygium wilfordii HOM05D007484 ORTHO05D008290 1.4e-17 94.7 342 24.6
Lalb_Chr20g0122271 Lupinus albus HOM05D007484 ORTHO05D008290 3.1e-17 93.6 338 24.6
CANSAT56G1153 Cannabis sativa HOM05D007484 ORTHO05D008290 7.0e-17 92.4 401 23.4
GSVIVG01003193001 Vitis vinifera HOM05D007484 ORTHO05D003151 4.5e-16 89.7 141 35.5
PGSC0003DMG400022354 Solanum tuberosum HOM05D007484 ORTHO05D008290 5.0e-15 86.3 280 26.1
TWI38G1471 Tripterygium wilfordii HOM05D007484 ORTHO05D008290 1.1e-14 85.1 305 25.2
CARHR053390 Cardamine hirsuta HOM05D007484 ORTHO05D008290 1.9e-14 84.3 103 44.7
Nn1g06758 Nelumbo nucifera HOM05D007484 ORTHO05D008290 1.9e-14 84.3 300 25.0
Solyc02g079120.1 Solanum lycopersicum HOM05D007484 ORTHO05D008290 3.3e-14 83.6 304 23.0
CARHR053010 Cardamine hirsuta HOM05D007484 ORTHO05D008290 4.2e-14 83.2 59 67.8
PGSC0003DMG400043893 Solanum tuberosum HOM05D007484 ORTHO05D008290 1.4e-12 78.2 283 23.0
SGA_v2.0_scaffold739G53544 Striga asiatica HOM05D007484 ORTHO05D008290 2.3e-12 77.4 220 26.4
MD10G1303300 Malus domestica HOM05D007484 ORTHO05D008290 3.0e-12 77.0 294 26.2
Nn1g07083 Nelumbo nucifera HOM05D000576 ORTHO05D003312 5.2e-12 76.3 249 23.7
TAR362G1194 Trochodendron aralioides HOM05D000576 ORTHO05D003312 5.2e-12 76.3 255 25.5
PGSC0003DMG400037537 Solanum tuberosum HOM05D007484 ORTHO05D008290 1.2e-11 75.1 283 23.3
CARHR053000 Cardamine hirsuta HOM05D007484 ORTHO05D008290 2.0e-11 74.3 59 61.0
Thecc.06G199300 Theobroma cacao HOM05D007484 ORTHO05D008290 4.4e-11 73.2 120 35.0
Dinv37215 Davidia involucrata HOM05D003242 ORTHO05D003593 7.5e-11 72.4 352 24.1
MBI02_g05995_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 1.7e-10 71.2 268 24.3
MBI18_g07609_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 1.4e-09 68.2 210 25.2
Nn2g12888 Nelumbo nucifera HOM05D003242 ORTHO05D003593 1.4e-09 68.2 312 22.8
Nn4g26661 Nelumbo nucifera HOM05D001396 ORTHO05D000493 1.8e-09 67.8 346 25.4
Nitab4.5_0000190g0090 Nicotiana tabacum HOM05D007484 ORTHO05D008290 2.4e-09 67.4 324 23.5
Cpa.g.sc27.126 Carica papaya HOM05D007484 ORTHO05D008290 3.1e-09 67.0 207 27.5
Aqoxy4G00512 Aquilegia oxysepala HOM05D000312 ORTHO05D000221 5.4e-09 66.2 377 21.2
Lj6g0012024 Lotus japonicus HOM05D007484 ORTHO05D008290 5.4e-09 66.2 287 24.0
TAR369G0738 Trochodendron aralioides HOM05D003242 ORTHO05D003593 9.2e-09 65.5 316 23.4
Lj2A441T55 Lonicera japonica HOM05D000051 ORTHO05D000015 1.6e-08 64.7 265 26.4
TAR629G2777 Trochodendron aralioides HOM05D003087 ORTHO05D003312 2.7e-08 63.9 306 22.5
Actinidia26997 Actinidia chinensis HOM05D007484 ORTHO05D008290 3.5e-08 63.5 124 30.6
Sc14g0001610 Simmondsia chinensis HOM05D007484 ORTHO05D008290 3.5e-08 63.5 298 22.5
COL.COLO4_31539 Corchorus olitorius HOM05D001396 ORTHO05D000493 4.5e-08 63.2 319 24.8
MBI02_g05996_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 4.5e-08 63.2 293 22.9
Medtr3g448340 Medicago truncatula HOM05D003087 ORTHO05D003312 4.5e-08 63.2 372 21.8
MBI02_g05998_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 5.9e-08 62.8 297 24.6
Cpa.g.sc27.122 Carica papaya HOM05D007484 ORTHO05D008290 1.3e-07 61.6 196 27.6
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 1.7e-07 61.2 266 24.1
MBI16_g01187_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 1.7e-07 61.2 250 24.0
FvH4_6g01331 Fragaria vesca HOM05D000576 ORTHO05D012667 3.8e-07 60.1 270 21.1
CARHR117950 Cardamine hirsuta HOM05D003087 ORTHO05D003312 6.6e-07 59.3 338 23.4
MBI02_g05997_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 8.6e-07 58.9 254 22.4
Psat4g131160 Pisum sativum HOM05D000576 ORTHO05D000368 8.6e-07 58.9 270 26.7
MBI18_g06655_MAGBIO Magnolia biondii HOM05D000051 ORTHO05D000015 1.1e-06 58.5 294 24.5
TAR623G0165 Trochodendron aralioides HOM05D003242 ORTHO05D003593 1.9e-06 57.8 327 23.9
FvH4_6g14500 Fragaria vesca HOM05D003242 ORTHO05D003593 2.5e-06 57.4 307 23.5
Cpa.g.sc8.221 Carica papaya HOM05D003087 ORTHO05D003312 4.3e-06 56.6 285 23.5
TAR371G0043 Trochodendron aralioides HOM05D000312 ORTHO05D000221 4.3e-06 56.6 83 33.7
FAN09G0289 Fragaria x ananassa HOM05D003242 ORTHO05D003593 5.6e-06 56.2 322 23.6
FAN14G3638 Fragaria x ananassa HOM05D003242 ORTHO05D003593 5.6e-06 56.2 307 23.5
GSVIVG01016605001 Vitis vinifera HOM05D003242 ORTHO05D003593 5.6e-06 56.2 323 21.4
Aqoxy5G04185 Aquilegia oxysepala HOM05D000015 ORTHO05D002445 7.3e-06 55.8 268 21.6
Actinidia32125 Actinidia chinensis HOM05D000617 ORTHO05D000229 9.5e-06 55.5 153 28.8
Lalb_Chr03g0040371 Lupinus albus HOM05D000576 ORTHO05D000368 9.5e-06 55.5 95 31.6
TAR624G0456 Trochodendron aralioides HOM05D003087 ORTHO05D003312 9.5e-06 55.5 264 23.5


User provided reference genes

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