Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 3.7e-163 578.2 299 100.0
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 6.2e-142 507.7 289 91.0
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 2.4e-138 495.7 297 85.9
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.1e-135 486.9 311 81.0
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 1.9e-135 486.1 302 83.4
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 3.3e-135 485.3 296 84.5
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 4.7e-134 481.5 297 84.8
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 3.1e-133 478.8 322 78.3
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.7e-131 473.0 298 82.2
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 8.7e-128 460.7 297 81.5
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 2.5e-127 459.1 267 88.4
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 8.4e-123 444.1 286 79.0
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.1e-122 443.7 305 77.7
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 2.1e-118 429.5 266 83.5
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 9.0e-117 424.1 266 82.7
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 1.1e-114 417.2 267 81.6
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 5.8e-108 394.8 285 72.3
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.1e-103 380.6 294 67.3
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 5.6e-103 378.3 286 68.5
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 5.6e-103 378.3 297 66.3
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 5.6e-103 378.3 278 71.6
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 4.8e-102 375.2 294 66.7
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 4.8e-102 375.2 289 68.2
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 3.1e-101 372.5 282 68.8
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 4.0e-101 372.1 294 66.3
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 4.0e-101 372.1 299 64.5
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 9.0e-101 370.9 281 69.0
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.4e-98 363.6 286 67.1
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 1.4e-98 363.6 294 64.6
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 6.0e-97 358.2 285 64.9
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.8e-96 356.7 295 62.4
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.8e-96 356.7 285 66.0
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 6.7e-96 354.8 285 66.0
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 1.9e-95 353.2 285 67.0
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 4.3e-95 352.1 293 63.1
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 4.3e-95 352.1 283 66.1
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 5.7e-95 351.7 281 65.8
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 5.7e-95 351.7 292 64.7
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 1.3e-94 350.5 289 64.0
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.6e-94 350.1 281 65.8
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 1.4e-93 347.1 263 68.4
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.4e-93 347.1 253 69.2
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.8e-93 346.7 277 66.4
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.8e-93 346.7 281 66.2
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 3.1e-93 345.9 259 70.7
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 3.1e-93 345.9 258 67.1
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 4.1e-93 345.5 316 57.9
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 6.9e-93 344.7 271 66.1
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 1.5e-92 343.6 257 67.7
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 2.0e-92 343.2 276 64.5
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 2.6e-92 342.8 194 87.6
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.7e-91 340.1 288 62.2
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 1.7e-91 340.1 259 66.4
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 2.9e-91 339.3 260 66.2
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 3.8e-91 339.0 289 64.4
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 3.8e-91 339.0 243 69.1
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 3.8e-91 339.0 261 64.8
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 3.8e-91 339.0 241 70.1
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 5.0e-91 338.6 286 63.6
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 5.0e-91 338.6 246 69.9
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 6.5e-91 338.2 242 69.4
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 8.5e-91 337.8 277 62.1
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 1.4e-90 337.0 278 64.0
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 1.4e-90 337.0 268 66.0
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 1.9e-90 336.7 294 61.2
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 3.2e-90 335.9 279 61.3
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 4.2e-90 335.5 241 69.7
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 5.5e-90 335.1 262 67.2
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 7.2e-90 334.7 239 69.9
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 7.9e-89 331.3 254 66.5
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 7.9e-89 331.3 271 66.4
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 3.0e-88 329.3 261 63.6
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.5e-87 327.0 281 60.9
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.9e-87 326.6 235 70.6
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 2.5e-87 326.2 285 60.4
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 9.7e-87 324.3 251 67.7
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.4e-85 320.5 291 58.4
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.4e-85 320.5 291 58.4
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 1.5e-84 317.0 280 57.9
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 3.4e-84 315.8 284 59.2
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 1.7e-83 313.5 255 62.0
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 8.5e-83 311.2 254 64.6
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 1.9e-82 310.1 230 67.8
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 2.1e-81 306.6 275 60.4
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 4.7e-81 305.4 259 62.2
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 6.1e-81 305.1 226 69.0
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 2.3e-80 303.1 233 63.9
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 1.3e-78 297.4 247 66.4
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 1.7e-78 297.0 246 61.8
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 1.7e-78 297.0 290 56.9
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 3.2e-74 282.7 243 59.7
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 5.5e-74 282.0 220 65.5
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 5.7e-71 271.9 235 61.3
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 1.1e-69 267.7 245 58.8
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 5.9e-68 261.9 188 68.1
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 2.7e-65 253.1 297 51.9
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 6.7e-64 248.4 225 54.2
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 1.0e-59 234.6 227 52.9
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.8e-54 216.5 285 46.7
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 8.6e-51 204.9 251 42.6
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.7e-43 180.6 228 42.1
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.9e-42 177.2 134 64.9
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 5.6e-42 175.6 234 42.3
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 1.1e-34 151.4 242 37.2
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 3.6e-33 146.4 233 40.3
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 6.4e-30 135.6 89 71.9
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 4.6e-28 129.4 258 36.4
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 1.2e-17 94.7 100 51.0
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.4e-16 90.5 84 52.4
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 7.6e-15 85.5 83 54.2
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 6.0e-12 75.9 44 75.0
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 1.0e-11 75.1 75 57.3
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 1.0e-11 75.1 75 57.3
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 3.0e-11 73.6 75 56.0
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 2.5e-10 70.5 103 41.7
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 2.1e-09 67.4 76 43.4
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.8e-08 64.3 53 52.8
SEGI_10943 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 9.9e-07 58.5 52 51.9
C03p46150 Brassica napus HOM05D024156 ORTHO05D027668 2.2e-06 57.4 57 57.9
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.4e-06 55.8 49 59.2


User provided reference genes

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