Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g04410 Schrenkiella parvula HOM05D007901 ORTHO05D010902 1.6e-45 185.7 90 100.0
Sp2g04430 Schrenkiella parvula HOM05D007901 ORTHO05D010902 6.6e-23 110.5 132 49.2
AT1G60340 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 8.7e-15 83.6 59 64.4
AT1G60350 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 1.9e-14 82.4 59 64.4
AL2G16340 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 2.5e-14 82.0 59 64.4
AT1G60300 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 5.6e-14 80.9 59 64.4
AL2G16330 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 2.8e-13 78.6 59 62.7
Carub.0002s0497 Capsella rubella HOM05D007901 ORTHO05D010902 2.8e-13 78.6 62 56.5
AL2G16360 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 4.7e-13 77.8 60 60.0
Carub.0002s0498 Capsella rubella HOM05D007901 ORTHO05D010902 4.7e-13 77.8 61 55.7
AL2G16320 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 6.2e-13 77.4 58 63.8
BcaC09g49444 Brassica carinata HOM05D007901 ORTHO05D010902 6.2e-13 77.4 60 56.7
C01p36710 Brassica napus HOM05D007901 ORTHO05D010902 6.2e-13 77.4 60 56.7
BolC1t03631H Brassica oleracea HOM05D007901 ORTHO05D010902 6.2e-13 77.4 60 56.7
BolC1t03653H Brassica oleracea HOM05D007901 ORTHO05D010902 6.2e-13 77.4 60 56.7
AT1G60280 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 8.1e-13 77.0 50 70.0
AL2G16550 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 2.4e-12 75.5 59 62.7
BcaB04g20261 Brassica carinata HOM05D007901 ORTHO05D010902 4.0e-12 74.7 60 58.3
Carub.0002s0495 Capsella rubella HOM05D007901 ORTHO05D010902 9.0e-12 73.6 58 58.6
Carub.0170s0002 Capsella rubella HOM05D007901 ORTHO05D010902 1.2e-11 73.2 68 52.9
Carub.0170s0003 Capsella rubella HOM05D007901 ORTHO05D010902 1.2e-11 73.2 59 57.6
BcaC04g20143 Brassica carinata HOM05D007901 ORTHO05D010902 1.5e-11 72.8 62 56.5
BolC9t57581H Brassica oleracea HOM05D007901 ORTHO05D010902 2.0e-11 72.4 61 57.4
C09p46950 Brassica napus HOM05D007901 ORTHO05D010902 4.4e-11 71.2 61 55.7
A01p29180 Brassica napus HOM05D007901 ORTHO05D010902 1.3e-10 69.7 60 51.7
BraA01t03004Z Brassica rapa HOM05D007901 ORTHO05D010902 1.3e-10 69.7 60 51.7
A10p13190 Brassica napus HOM05D007901 ORTHO05D010902 2.2e-10 68.9 60 56.7
BraA10t43416Z Brassica rapa HOM05D007901 ORTHO05D010902 2.2e-10 68.9 60 56.7
A10p13320 Brassica napus HOM05D007901 ORTHO05D010902 4.9e-10 67.8 60 56.7
BraA10t43433Z Brassica rapa HOM05D007901 ORTHO05D010902 4.9e-10 67.8 60 56.7
BcaB04g20243 Brassica carinata HOM05D007901 ORTHO05D010902 6.4e-10 67.4 60 53.3
C09p47250 Brassica napus HOM05D007901 ORTHO05D010902 6.4e-10 67.4 60 56.7
BcaC04g20178 Brassica carinata HOM05D007901 ORTHO05D010902 1.4e-09 66.2 60 55.0
A10p13180 Brassica napus HOM05D007901 ORTHO05D010902 1.4e-09 66.2 60 60.0
BolC9t57543H Brassica oleracea HOM05D007901 ORTHO05D010902 1.4e-09 66.2 60 55.0
BraA10t43415Z Brassica rapa HOM05D007901 ORTHO05D010902 1.4e-09 66.2 60 60.0
AT1G60380 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 7.1e-09 63.9 60 56.7
A01p28980 Brassica napus HOM05D007901 ORTHO05D010902 1.2e-08 63.2 82 40.2
BcaB08g35962 Brassica carinata HOM05D007901 ORTHO05D010902 1.6e-08 62.8 61 54.1
BraA01t02977Z Brassica rapa HOM05D007901 ORTHO05D010902 7.8e-08 60.5 50 52.0
CARHR052680 Cardamine hirsuta HOM05D007901 ORTHO05D010902 1.7e-07 59.3 60 50.0
CARHR052690 Cardamine hirsuta HOM05D007901 ORTHO05D016734 1.1e-06 56.6 56 50.0


User provided reference genes

Program Settings