Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g04180 Schrenkiella parvula HOM05D000279 ORTHO05D017442 3.7e-74 281.6 154 100.0
Thhalv10024005m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 9.6e-14 80.9 99 55.6
C09p21730 Brassica napus HOM05D000279 ORTHO05D000498 1.6e-13 80.1 97 52.6
BcaC02g09766 Brassica carinata HOM05D000279 ORTHO05D017442 6.2e-13 78.2 69 71.0
C04p36830 Brassica napus HOM05D000279 ORTHO05D017442 6.2e-13 78.2 69 71.0
Thhalv10023616m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.8e-12 76.6 114 50.9
Thhalv10023572m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 2.4e-12 76.3 102 53.9
Thhalv10023996m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 2.4e-12 76.3 92 55.4
BcaC09g49415 Brassica carinata HOM05D000279 ORTHO05D000498 4.0e-12 75.5 109 49.5
BolC9t55078H Brassica oleracea HOM05D000279 ORTHO05D000498 4.0e-12 75.5 78 57.7
BcaB07g31218 Brassica carinata HOM05D000279 ORTHO05D000498 6.9e-12 74.7 78 57.7
BcaC02g09769 Brassica carinata HOM05D000279 ORTHO05D000498 9.0e-12 74.3 101 52.5
C04p36820 Brassica napus HOM05D000279 ORTHO05D017442 9.0e-12 74.3 101 52.5
AL2G11470 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 1.2e-11 73.9 118 44.9
BolC4t25117H Brassica oleracea HOM05D000279 ORTHO05D000498 1.2e-11 73.9 101 52.5
A09p17440 Brassica napus HOM05D000279 ORTHO05D000498 2.0e-11 73.2 78 56.4
C01p36970 Brassica napus HOM05D000279 ORTHO05D000498 2.0e-11 73.2 129 45.0
BcaC04g22242 Brassica carinata HOM05D000279 ORTHO05D000498 3.4e-11 72.4 78 56.4
BcaC04g22238 Brassica carinata HOM05D000279 ORTHO05D000498 4.5e-11 72.0 74 59.5
Sp2g04170 Schrenkiella parvula HOM05D000279 ORTHO05D000498 4.5e-11 72.0 71 63.4
BraA09t37371Z Brassica rapa HOM05D000279 ORTHO05D000498 7.6e-11 71.2 78 55.1
BolC1t03654H Brassica oleracea HOM05D000279 ORTHO05D000498 9.9e-11 70.9 107 52.3
BcaB04g20263 Brassica carinata HOM05D000279 ORTHO05D000498 1.1e-09 67.4 127 42.5
Thhalv10024153m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.1e-09 67.4 89 49.4
BolC4t25116H Brassica oleracea HOM05D000279 ORTHO05D017442 5.5e-09 65.1 57 70.2
Thhalv10023897m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.2e-08 63.9 59 62.7
A01p29190 Brassica napus HOM05D000279 ORTHO05D000498 1.6e-08 63.5 97 51.5
BraA01t02976Z Brassica rapa HOM05D000279 ORTHO05D000498 1.6e-08 63.5 107 48.6
BcaB07g31223 Brassica carinata HOM05D000279 ORTHO05D000498 2.7e-08 62.8 79 57.0
CARHR137510 Cardamine hirsuta HOM05D000279 ORTHO05D000498 2.7e-08 62.8 129 40.3
AT2G42470 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 3.5e-08 62.4 112 40.2
CARHR127280 Cardamine hirsuta HOM05D000279 ORTHO05D000498 4.6e-08 62.0 72 56.9
AL4G40960 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 1.8e-07 60.1 90 44.4
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 1.8e-07 60.1 76 55.3
A05p02990 Brassica napus HOM05D000279 ORTHO05D000498 3.0e-07 59.3 90 44.4
C03p28200 Brassica napus HOM05D000279 ORTHO05D000498 3.9e-07 58.9 84 46.4
BolC3t15191H Brassica oleracea HOM05D000279 ORTHO05D000498 3.9e-07 58.9 84 46.4
CARHR260850 Cardamine hirsuta HOM05D000279 ORTHO05D017442 3.9e-07 58.9 73 52.1
AL4G40940 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 8.7e-07 57.8 111 42.3
BcaC04g19855 Brassica carinata HOM05D000279 ORTHO05D013796 1.1e-06 57.4 57 54.4
A03p23650 Brassica napus HOM05D000279 ORTHO05D000498 1.1e-06 57.4 84 46.4
BolC9t57961H Brassica oleracea HOM05D000279 ORTHO05D013796 1.1e-06 57.4 57 54.4
BraA03t11581Z Brassica rapa HOM05D000279 ORTHO05D000498 1.1e-06 57.4 84 46.4
BraA10t43691Z Brassica rapa HOM05D000279 ORTHO05D013796 1.1e-06 57.4 57 54.4
Thhalv10017566m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.1e-06 57.4 71 46.5
BcaB04g20240 Brassica carinata HOM05D000279 ORTHO05D000498 1.9e-06 56.6 87 44.8
BcaC09g49446 Brassica carinata HOM05D000279 ORTHO05D000498 1.9e-06 56.6 72 51.4
C01p36650 Brassica napus HOM05D000279 ORTHO05D000498 1.9e-06 56.6 72 51.4
BolC1t03624H Brassica oleracea HOM05D000279 ORTHO05D000498 1.9e-06 56.6 72 51.4
BraA01t03006Z Brassica rapa HOM05D000279 ORTHO05D000498 1.9e-06 56.6 86 45.3
CARHR137530 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.9e-06 56.6 112 45.5
BcaB01g03449 Brassica carinata HOM05D000279 ORTHO05D000498 2.5e-06 56.2 83 43.4
AL4G40950 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.3e-06 55.8 108 42.6
BraA06t27147Z Brassica rapa HOM05D000279 ORTHO05D000498 4.3e-06 55.5 95 41.1
Carub.0004s2486 Capsella rubella HOM05D000279 ORTHO05D000498 5.6e-06 55.1 100 41.0
AT2G42460 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 7.4e-06 54.7 76 52.6
BcaC02g12432 Brassica carinata HOM05D000279 ORTHO05D013796 7.4e-06 54.7 63 47.6
A04p32240 Brassica napus HOM05D000279 ORTHO05D000498 7.4e-06 54.7 77 44.2
AL2G15770 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 9.6e-06 54.3 71 52.1
AL4G41010 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 9.6e-06 54.3 66 47.0
BcaC01g05284 Brassica carinata HOM05D000279 ORTHO05D000498 9.6e-06 54.3 83 42.2
Sp4g24610 Schrenkiella parvula HOM05D000279 ORTHO05D000498 9.6e-06 54.3 82 39.0


User provided reference genes

Program Settings