Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g04000 Schrenkiella parvula HOM05D009121 ORTHO05D001888 6.3e-88 327.4 166 100.0
Thhalv10024081m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 4.9e-64 248.1 165 77.6
AL2G15820 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 2.7e-62 242.3 163 74.8
AT1G60760 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 4.6e-62 241.5 163 74.2
Carub.0002s0459 Capsella rubella HOM05D009121 ORTHO05D001888 8.6e-61 237.3 164 73.2
A09p17300 Brassica napus HOM05D009121 ORTHO05D001888 4.0e-58 228.4 165 69.7
BraA09t37359Z Brassica rapa HOM05D009121 ORTHO05D001888 4.0e-58 228.4 165 69.7
C09p21480 Brassica napus HOM05D009121 ORTHO05D001888 2.6e-57 225.7 165 69.1
BolC9t55053H Brassica oleracea HOM05D009121 ORTHO05D001888 2.6e-57 225.7 165 69.1
BcaNung05350 Brassica carinata HOM05D009121 ORTHO05D001888 5.8e-57 224.6 164 68.9
CARHR051730 Cardamine hirsuta HOM05D009121 ORTHO05D001888 3.0e-53 212.2 167 65.9
BcaC05g24955 Brassica carinata HOM05D009121 ORTHO05D001888 1.7e-48 196.4 168 60.7
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 6.0e-46 188.0 167 58.7
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 2.3e-45 186.0 158 60.8
BcaC07g38628 Brassica carinata HOM05D009121 ORTHO05D001888 8.7e-45 184.1 167 58.7
C08p48520 Brassica napus HOM05D009121 ORTHO05D001888 8.7e-45 184.1 168 57.1
BolC5t29657H Brassica oleracea HOM05D009121 ORTHO05D001888 8.7e-45 184.1 168 57.1
C05p09130 Brassica napus HOM05D009121 ORTHO05D001888 1.1e-44 183.7 168 57.1
BolC8t52391H Brassica oleracea HOM05D009121 ORTHO05D001888 1.1e-44 183.7 168 57.1
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 2.5e-44 182.6 167 56.9
BcaB08g37374 Brassica carinata HOM05D009121 ORTHO05D001888 4.3e-44 181.8 168 56.0
A06p07570 Brassica napus HOM05D009121 ORTHO05D001888 5.6e-44 181.4 168 57.1
BraA06t23959Z Brassica rapa HOM05D009121 ORTHO05D001888 5.6e-44 181.4 168 57.1
A09p64670 Brassica napus HOM05D009121 ORTHO05D001888 7.3e-44 181.0 168 56.0
BraA09t41825Z Brassica rapa HOM05D009121 ORTHO05D001888 7.3e-44 181.0 168 56.0
Thhalv10008932m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 7.3e-44 181.0 168 56.5
Sp1g09470 Schrenkiella parvula HOM05D009121 ORTHO05D001888 3.6e-43 178.7 168 55.4
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 4.8e-43 178.3 166 56.0
CARHR010990 Cardamine hirsuta HOM05D009121 ORTHO05D001888 6.2e-43 177.9 167 55.7
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 1.4e-42 176.8 167 54.5
THA.LOC104819351 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 5.8e-41 171.4 159 56.0
BcaC07g38589 Brassica carinata HOM05D009121 ORTHO05D001888 5.6e-36 154.8 167 53.3
Aa31LG1G4060 Aethionema arabicum HOM05D009121 ORTHO05D001888 4.0e-26 122.1 139 45.3
BolC8t49030H Brassica oleracea HOM05D009121 ORTHO05D001888 1.0e-16 90.9 94 54.3
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 5.5e-15 85.1 135 36.3
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 1.2e-14 84.0 152 33.6
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 3.6e-14 82.4 158 32.9
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 4.6e-14 82.0 160 33.1
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 6.1e-14 81.6 161 32.3
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 6.1e-14 81.6 161 32.3
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 2.3e-13 79.7 158 34.8
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 2.3e-13 79.7 156 33.3
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 8.8e-13 77.8 165 33.3
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 8.8e-13 77.8 157 32.5
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.1e-12 77.4 152 32.9
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 1.5e-12 77.0 155 36.1
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 2.0e-12 76.6 164 33.5
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 3.3e-12 75.9 150 32.0
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 4.3e-12 75.5 164 32.3
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 9.7e-12 74.3 159 33.3
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 9.7e-12 74.3 158 33.5
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 9.7e-12 74.3 154 29.9
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 1.3e-11 73.9 157 32.5
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 1.7e-11 73.6 160 33.1
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 1.7e-11 73.6 158 32.3
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 6.3e-11 71.6 158 32.9
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 8.2e-11 71.2 163 33.1
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 1.8e-10 70.1 146 28.8
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 2.4e-10 69.7 132 30.3
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 3.1e-10 69.3 134 31.3
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 5.3e-10 68.6 150 32.0
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 2.0e-09 66.6 136 30.9
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 2.0e-09 66.6 136 30.9
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 2.6e-09 66.2 158 33.5
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 4.5e-09 65.5 136 30.1
C08p13970 Brassica napus HOM05D009121 ORTHO05D001888 1.0e-08 64.3 67 49.3
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 1.3e-08 63.9 155 27.7
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 1.3e-08 63.9 155 27.7
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 2.2e-08 63.2 136 29.4
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 2.9e-08 62.8 139 30.9
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 3.8e-08 62.4 165 28.5
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 5.0e-08 62.0 139 30.2
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 5.0e-08 62.0 143 29.4
Ciclev10007183m.g Citrus clementina HOM05D005742 ORTHO05D001888 1.1e-07 60.8 151 31.1
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 1.9e-07 60.1 139 30.2
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 3.2e-07 59.3 148 29.7
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 4.2e-07 58.9 140 27.9
TAR622G1131 Trochodendron aralioides HOM05D008070 ORTHO05D001888 7.2e-07 58.2 161 28.6
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 2.1e-06 56.6 156 27.6
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 2.7e-06 56.2 145 30.3
PSO478G3987 Papaver somniferum HOM05D020914 ORTHO05D001888 6.1e-06 55.1 174 27.6
PSO017G3787 Papaver somniferum HOM05D020914 ORTHO05D023578 7.9e-06 54.7 174 27.0


User provided reference genes

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