Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g03860 Schrenkiella parvula HOM05D000003 ORTHO05D000283 5.1e-128 461.1 230 100.0
BolC5t31190H Brassica oleracea HOM05D000003 ORTHO05D000283 2.1e-17 93.6 92 42.4
BolC6t37177H Brassica oleracea HOM05D000003 ORTHO05D000283 6.9e-16 88.6 92 43.5
BraA09t38940Z Brassica rapa HOM05D000003 ORTHO05D000283 9.9e-15 84.7 92 42.4
BcaC03g17941 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-14 84.3 93 43.0
BolC7t43339H Brassica oleracea HOM05D000003 ORTHO05D000283 1.3e-14 84.3 92 42.4
BcaB03g13757 Brassica carinata HOM05D000003 ORTHO05D000283 3.8e-14 82.8 92 39.1
BolC2t07181H Brassica oleracea HOM05D000003 ORTHO05D000283 4.9e-14 82.4 92 43.5
BcaB02g08653 Brassica carinata HOM05D000003 ORTHO05D000283 6.4e-14 82.0 92 41.3
BraA01t01398Z Brassica rapa HOM05D000003 ORTHO05D000283 1.4e-13 80.9 92 34.8
BcaC08g44971 Brassica carinata HOM05D000003 ORTHO05D000004 2.4e-13 80.1 93 39.8
BolC5t32204H Brassica oleracea HOM05D000003 ORTHO05D000283 3.2e-13 79.7 141 33.3
BcaB02g09394 Brassica carinata HOM05D000003 ORTHO05D000283 4.2e-13 79.3 92 42.4
AL1G41870 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 5.4e-13 79.0 94 37.2
BolC2t07536H Brassica oleracea HOM05D000003 ORTHO05D000283 5.4e-13 79.0 92 41.3
BcaC09g50223 Brassica carinata HOM05D000003 ORTHO05D000283 7.1e-13 78.6 99 36.4
C08p07500 Brassica napus HOM05D000003 ORTHO05D000283 7.1e-13 78.6 89 40.4
Sp2g02500 Schrenkiella parvula HOM05D000003 ORTHO05D000283 2.1e-12 77.0 92 37.0
AL1G56200 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 3.5e-12 76.3 89 36.0
BraA07t28299Z Brassica rapa HOM05D000003 ORTHO05D000283 3.5e-12 76.3 92 40.2
C04p09320 Brassica napus HOM05D000003 ORTHO05D000283 1.3e-11 74.3 80 41.2
BcaC06g35549 Brassica carinata HOM05D000003 ORTHO05D000283 1.8e-11 73.9 89 36.0
AL3G45200 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 3.0e-11 73.2 143 32.9
Carub.0001s3394 Capsella rubella HOM05D000003 ORTHO05D000283 8.7e-11 71.6 106 34.0
BcaB04g19231 Brassica carinata HOM05D000003 ORTHO05D000283 1.5e-10 70.9 81 30.9
A02p04600 Brassica napus HOM05D000003 ORTHO05D000283 1.5e-10 70.9 92 35.9
C01p15730 Brassica napus HOM05D000003 ORTHO05D000283 2.5e-10 70.1 95 42.1
BolC1t01526H Brassica oleracea HOM05D000003 ORTHO05D000283 2.5e-10 70.1 95 42.1
AL3G43240 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 4.3e-10 69.3 87 36.8
BraA04t17013Z Brassica rapa HOM05D000003 ORTHO05D000283 4.3e-10 69.3 94 31.9
BolC1t01970H Brassica oleracea HOM05D000003 ORTHO05D000283 2.1e-09 67.0 92 37.0
AL4G24940 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 3.7e-09 66.2 80 33.8
BcaC06g36136 Brassica carinata HOM05D000003 ORTHO05D000283 4.8e-09 65.9 81 38.3
BraA09t37875Z Brassica rapa HOM05D000003 ORTHO05D000004 4.8e-09 65.9 94 36.2
AL4G12860 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 6.2e-09 65.5 92 34.8
BcaB02g07795 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-09 65.5 95 42.1
BcaC02g11961 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-09 65.5 78 38.5
BcaC09g48789 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-09 65.5 78 34.6
C06p29060 Brassica napus HOM05D004952 ORTHO05D006131 6.2e-09 65.5 71 45.1
BolC2t07353H Brassica oleracea HOM05D000003 ORTHO05D000283 6.2e-09 65.5 94 35.1
BolC6t38069H Brassica oleracea HOM05D004952 ORTHO05D006131 6.2e-09 65.5 71 45.1
BolC1t03920H Brassica oleracea HOM05D000003 ORTHO05D000283 8.1e-09 65.1 67 38.8
BolC9t54942H Brassica oleracea HOM05D000003 ORTHO05D000283 1.1e-08 64.7 94 36.2
C09p20360 Brassica napus HOM05D000003 ORTHO05D000283 1.4e-08 64.3 93 36.6
AL5G25100 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.8e-08 63.9 90 37.8
Nitab4.5_0009949g0020 Nicotiana tabacum HOM05D008253 ORTHO05D000283 2.4e-08 63.5 99 32.3
AL1G60290 Arabidopsis lyrata HOM05D064363 ORTHO05D000283 3.1e-08 63.2 90 34.4
BcaB02g10118 Brassica carinata HOM05D000003 ORTHO05D000283 3.1e-08 63.2 96 39.6
BcaC03g15593 Brassica carinata HOM05D000003 ORTHO05D000283 4.0e-08 62.8 92 34.8
BraA08t32771Z Brassica rapa HOM05D000003 ORTHO05D000283 4.0e-08 62.8 150 27.3
BcaC08g44386 Brassica carinata HOM05D000003 ORTHO05D000283 5.3e-08 62.4 92 37.0
BcaC09g48611 Brassica carinata HOM05D000003 ORTHO05D000283 5.3e-08 62.4 79 35.4
A03p35460 Brassica napus HOM05D000003 ORTHO05D000283 5.3e-08 62.4 99 30.3
BolC9t56630H Brassica oleracea HOM05D000003 ORTHO05D000283 5.3e-08 62.4 92 38.0
BraA03t12723Z Brassica rapa HOM05D000003 ORTHO05D000283 5.3e-08 62.4 99 30.3
BcaC04g19019 Brassica carinata HOM05D000003 ORTHO05D000283 6.9e-08 62.0 63 38.1
BolC9t59539H Brassica oleracea HOM05D000003 ORTHO05D000283 6.9e-08 62.0 94 34.0
BcaB06g29407 Brassica carinata HOM05D000003 ORTHO05D000283 1.2e-07 61.2 92 39.1
BcaC05g27506 Brassica carinata HOM05D000003 ORTHO05D000283 1.2e-07 61.2 109 34.9
BcaB01g01489 Brassica carinata HOM05D000003 ORTHO05D000283 1.5e-07 60.8 79 34.2
BcaNung03504 Brassica carinata HOM05D000003 ORTHO05D027488 1.5e-07 60.8 92 34.8
BolC5t32160H Brassica oleracea HOM05D000003 ORTHO05D000283 1.5e-07 60.8 91 35.2
BcaB02g10680 Brassica carinata HOM05D000003 ORTHO05D000283 2.0e-07 60.5 66 39.4
BraA10t42734Z Brassica rapa HOM05D000003 ORTHO05D000283 2.0e-07 60.5 90 35.6
Carub.0002s0384 Capsella rubella HOM05D000003 ORTHO05D000283 2.0e-07 60.5 73 42.5
Nitab4.5_0005761g0140 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.0e-07 60.5 91 34.1
AL6G39210 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 3.4e-07 59.7 93 38.7
BcaB05g22928 Brassica carinata HOM05D000003 ORTHO05D000283 3.4e-07 59.7 180 28.9
BcaC05g25052 Brassica carinata HOM05D000003 ORTHO05D000283 4.5e-07 59.3 89 32.6
BolC9t55722H Brassica oleracea HOM05D000003 ORTHO05D000283 4.5e-07 59.3 94 34.0
BcaC07g38507 Brassica carinata HOM05D000003 ORTHO05D000283 5.8e-07 58.9 90 36.7
BolC6t36801H Brassica oleracea HOM05D000003 ORTHO05D000283 5.8e-07 58.9 91 30.8
Carub.0002s0853 Capsella rubella HOM05D000003 ORTHO05D000283 5.8e-07 58.9 92 31.5
Nitab4.5_0003715g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000283 5.8e-07 58.9 96 34.4
PGR142G0882 Punica granatum HOM05D000003 ORTHO05D000004 5.8e-07 58.9 67 40.3
BcaC07g39463 Brassica carinata HOM05D000003 ORTHO05D000283 7.6e-07 58.5 98 38.8
BcaC07g42553 Brassica carinata HOM05D000003 ORTHO05D000283 7.6e-07 58.5 45 53.3
BraA05t22459Z Brassica rapa HOM05D000003 ORTHO05D000283 7.6e-07 58.5 60 45.0
PGR042G2946 Punica granatum HOM05D000003 ORTHO05D000283 7.6e-07 58.5 97 33.0
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.0e-06 58.2 95 33.7
BcaC05g29848 Brassica carinata HOM05D000003 ORTHO05D000283 1.0e-06 58.2 69 39.1
vmacro07114 Vaccinium macrocarpon HOM05D000003 ORTHO05D000283 1.0e-06 58.2 140 31.4
BcaC03g13447 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-06 57.8 53 47.2
BcaNung03095 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-06 57.8 53 47.2
C05p39080 Brassica napus HOM05D000003 ORTHO05D000283 1.3e-06 57.8 92 38.0
BolC3t16330H Brassica oleracea HOM05D000003 ORTHO05D000283 1.3e-06 57.8 46 47.8
BolC3t17470H Brassica oleracea HOM05D000003 ORTHO05D000283 1.3e-06 57.8 85 37.6
BolC7t40742H Brassica oleracea HOM05D000003 ORTHO05D000283 1.3e-06 57.8 114 31.6
BraA08t32486Z Brassica rapa HOM05D000003 ORTHO05D000006 1.3e-06 57.8 152 28.9
BcaC05g26562 Brassica carinata HOM05D000003 ORTHO05D000283 1.7e-06 57.4 47 53.2
BolC4t28361H Brassica oleracea HOM05D000003 ORTHO05D000283 1.7e-06 57.4 98 33.7
BolC7t40516H Brassica oleracea HOM05D000003 ORTHO05D000283 1.7e-06 57.4 77 33.8
BolC8t47863H Brassica oleracea HOM05D000003 ORTHO05D000283 1.7e-06 57.4 77 36.4
BolC3t20166H Brassica oleracea HOM05D000003 ORTHO05D000283 2.2e-06 57.0 92 38.0
BolC5t33234H Brassica oleracea HOM05D000003 ORTHO05D000283 2.2e-06 57.0 77 39.0
BolC6t37189H Brassica oleracea HOM05D000003 ORTHO05D000283 2.2e-06 57.0 94 33.0
BraA09t37459Z Brassica rapa HOM05D023097 ORTHO05D024232 2.2e-06 57.0 54 42.6
Carub.0003s1889 Capsella rubella HOM05D000003 ORTHO05D000283 2.2e-06 57.0 92 37.0
BcaB08g36266 Brassica carinata HOM05D000003 ORTHO05D000283 2.9e-06 56.6 129 32.6
A03p14250 Brassica napus HOM05D000003 ORTHO05D000283 2.9e-06 56.6 92 34.8
BolC1t01030H Brassica oleracea HOM05D000003 ORTHO05D000283 2.9e-06 56.6 92 34.8
BolC4t24805H Brassica oleracea HOM05D012406 ORTHO05D000283 2.9e-06 56.6 82 30.5
Duzib235G0456 Durio zibethinus HOM05D000003 ORTHO05D000283 2.9e-06 56.6 48 50.0
HanXRQChr17g0558651 Helianthus annuus HOM05D000003 ORTHO05D000004 2.9e-06 56.6 95 30.5
AT1G60720 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 3.8e-06 56.2 94 36.2
C08p24180 Brassica napus HOM05D000003 ORTHO05D011072 3.8e-06 56.2 78 33.3
BolC1t03740H Brassica oleracea HOM05D000003 ORTHO05D000283 3.8e-06 56.2 87 34.5
BraA09t41647Z Brassica rapa HOM05D000003 ORTHO05D000283 3.8e-06 56.2 93 40.9
BcaB04g19079 Brassica carinata HOM05D000003 ORTHO05D000283 4.9e-06 55.8 51 47.1
BcaC03g15783 Brassica carinata HOM05D000003 ORTHO05D000283 4.9e-06 55.8 92 34.8
BcaC07g40370 Brassica carinata HOM05D000003 ORTHO05D000283 4.9e-06 55.8 96 34.4
BolC5t29572H Brassica oleracea HOM05D012406 ORTHO05D000283 4.9e-06 55.8 66 42.4
C07p39070 Brassica napus HOM05D000003 ORTHO05D000283 6.4e-06 55.5 44 47.7
Carub.0007s1219 Capsella rubella HOM05D000003 ORTHO05D000283 6.4e-06 55.5 99 31.3
Duzib150G0793 Durio zibethinus HOM05D000003 ORTHO05D000283 6.4e-06 55.5 52 46.2
ECA236G4757 Erigeron canadensis HOM05D000003 ORTHO05D000283 6.4e-06 55.5 96 27.1
ECA238G2807 Erigeron canadensis HOM05D000432 ORTHO05D000320 6.4e-06 55.5 77 39.0
Sopen00g005320 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-06 55.5 63 39.7
AL2G10360 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 8.4e-06 55.1 92 31.5
BcaC08g42995 Brassica carinata HOM05D000003 ORTHO05D000283 8.4e-06 55.1 90 37.8
PGR044G2585 Punica granatum HOM05D000003 ORTHO05D000283 8.4e-06 55.1 50 46.0


User provided reference genes

Program Settings