Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g03780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.1e-51 205.3 95 100.0
BcaC04g22284 Brassica carinata HOM05D007338 ORTHO05D009406 2.3e-42 175.3 95 84.2
A09p17160 Brassica napus HOM05D007338 ORTHO05D009406 2.3e-42 175.3 95 82.1
BcaC04g22279 Brassica carinata HOM05D007338 ORTHO05D009406 2.6e-41 171.8 95 81.1
BolC9t55035H Brassica oleracea HOM05D007338 ORTHO05D009406 2.6e-41 171.8 95 81.1
C09p21220 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-41 171.0 95 82.1
BcaB07g31238 Brassica carinata HOM05D007338 ORTHO05D009406 2.2e-40 168.7 95 82.1
BcaB07g31240 Brassica carinata HOM05D007338 ORTHO05D009406 2.8e-40 168.3 95 81.1
BcaB07g31237 Brassica carinata HOM05D007338 ORTHO05D009406 6.3e-40 167.2 95 82.1
BraA09t37346Z Brassica rapa HOM05D007338 ORTHO05D009406 1.2e-35 152.9 141 56.0
A09p17150 Brassica napus HOM05D007338 ORTHO05D009406 3.6e-35 151.4 138 55.8
C09p21390 Brassica napus HOM05D007338 ORTHO05D009406 6.7e-34 147.1 95 71.6
BolC9t55025H Brassica oleracea HOM05D007338 ORTHO05D009406 5.7e-33 144.1 92 73.9
Sp2g03760 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.6e-30 135.2 96 65.6
Sp6g08720 Schrenkiella parvula HOM05D007338 ORTHO05D009406 7.7e-30 133.7 96 65.6
Sp4g10780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 3.8e-29 131.3 96 64.6
Sp5g03420 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.0e-29 131.0 96 62.5
Sp5g03390 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.1e-28 129.8 96 62.5
C09p21400 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-28 129.4 95 64.2
Sp5g03400 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.5e-28 127.5 96 61.5
Sp6g08680 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.8e-26 122.5 91 62.6
Sp5g03410 Schrenkiella parvula HOM05D007338 ORTHO05D009406 8.8e-26 120.2 90 61.1
C09p21230 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-25 118.6 92 64.1
Sp5g03380 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.0e-22 109.0 75 66.7
BcaB06g27588 Brassica carinata HOM05D007338 ORTHO05D009406 5.5e-20 100.9 95 50.5
BcaB06g27589 Brassica carinata HOM05D007338 ORTHO05D009406 5.5e-20 100.9 95 50.5
C04p48140 Brassica napus HOM05D007338 ORTHO05D009406 5.5e-20 100.9 95 49.5
BolC4t26404H Brassica oleracea HOM05D007338 ORTHO05D009406 5.5e-20 100.9 95 49.5
A04p14100 Brassica napus HOM05D007338 ORTHO05D009406 9.4e-20 100.1 95 49.5
BraA04t17071Z Brassica rapa HOM05D007338 ORTHO05D009406 9.4e-20 100.1 95 49.5
AL5G42110 Arabidopsis lyrata HOM05D007338 ORTHO05D009406 2.1e-19 99.0 91 57.1
BcaC07g40398 Brassica carinata HOM05D007338 ORTHO05D009406 2.1e-19 99.0 93 49.5
Carub.0005s1075 Capsella rubella HOM05D007338 ORTHO05D009406 3.6e-19 98.2 93 52.7
Carub.0005s1076 Capsella rubella HOM05D007338 ORTHO05D009406 4.0e-18 94.7 93 51.6
AT3G59930 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 6.8e-18 94.0 91 54.9
BcaB08g34762 Brassica carinata HOM05D007338 ORTHO05D009406 1.5e-17 92.8 97 48.5
AT5G33355 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 3.4e-17 91.7 91 53.8
BcaC09g49321 Brassica carinata HOM05D007338 ORTHO05D009406 3.4e-17 91.7 90 52.2
C01p37930 Brassica napus HOM05D007338 ORTHO05D009406 3.4e-17 91.7 90 52.2
BcaB04g20324 Brassica carinata HOM05D007338 ORTHO05D009406 4.4e-17 91.3 90 52.2
BcaC09g49310 Brassica carinata HOM05D007338 ORTHO05D009406 4.4e-17 91.3 91 53.8
C01p38040 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-17 91.3 91 53.8
BolC1t03768H Brassica oleracea HOM05D007338 ORTHO05D009406 4.4e-17 91.3 91 53.8
BcaC09g49318 Brassica carinata HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
BcaC09g49319 Brassica carinata HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
BcaC09g49324 Brassica carinata HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
A01p29990 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
A01p30010 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
A01p30020 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
A01p30030 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
A01p30070 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
C01p37910 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
C01p37970 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
C01p37980 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
BraA01t03132Z Brassica rapa HOM05D007338 ORTHO05D009406 5.7e-17 90.9 90 52.2
BcaC09g49320 Brassica carinata HOM05D007338 ORTHO05D009406 7.5e-17 90.5 90 51.1
A01p30000 Brassica napus HOM05D007338 ORTHO05D009406 7.5e-17 90.5 90 51.1
C01p37940 Brassica napus HOM05D007338 ORTHO05D009406 7.5e-17 90.5 90 51.1
BcaB04g20323 Brassica carinata HOM05D007338 ORTHO05D009406 9.8e-17 90.1 90 52.2
A01p30040 Brassica napus HOM05D007338 ORTHO05D009406 1.3e-16 89.7 90 52.2
A01p30050 Brassica napus HOM05D007338 ORTHO05D009406 1.3e-16 89.7 90 51.1
BcaC09g49322 Brassica carinata HOM05D007338 ORTHO05D009406 1.7e-16 89.4 90 51.1
C01p37920 Brassica napus HOM05D007338 ORTHO05D009406 1.7e-16 89.4 90 51.1
BcaC09g49311 Brassica carinata HOM05D007338 ORTHO05D009406 2.2e-16 89.0 90 51.1
BcaC09g49314 Brassica carinata HOM05D007338 ORTHO05D009406 2.2e-16 89.0 90 51.1
C01p38030 Brassica napus HOM05D007338 ORTHO05D009406 2.2e-16 89.0 90 51.1
A01p30060 Brassica napus HOM05D007338 ORTHO05D009406 3.7e-16 88.2 90 51.1
C01p37950 Brassica napus HOM05D007338 ORTHO05D009406 3.7e-16 88.2 90 51.1
C01p37960 Brassica napus HOM05D007338 ORTHO05D009406 4.8e-16 87.8 88 51.1
BcaC09g49309 Brassica carinata HOM05D007338 ORTHO05D009406 6.3e-16 87.4 90 50.0
BcaC09g49316 Brassica carinata HOM05D007338 ORTHO05D009406 6.3e-16 87.4 90 50.0
C01p38000 Brassica napus HOM05D007338 ORTHO05D009406 6.3e-16 87.4 90 50.0
C01p38020 Brassica napus HOM05D007338 ORTHO05D009406 6.3e-16 87.4 90 50.0
C01p38060 Brassica napus HOM05D007338 ORTHO05D009406 6.3e-16 87.4 90 50.0
BolC1t03766H Brassica oleracea HOM05D007338 ORTHO05D009406 6.3e-16 87.4 90 50.0
BraA01t03137Z Brassica rapa HOM05D007338 ORTHO05D009406 1.4e-15 86.3 90 48.9
BraA01t03129Z Brassica rapa HOM05D007338 ORTHO05D009406 1.8e-15 85.9 90 48.9
BraA01t03131Z Brassica rapa HOM05D007338 ORTHO05D009406 1.8e-15 85.9 90 48.9
BraA01t03133Z Brassica rapa HOM05D007338 ORTHO05D009406 1.8e-15 85.9 90 48.9
BraA01t03134Z Brassica rapa HOM05D007338 ORTHO05D009406 1.8e-15 85.9 90 48.9
Sp3g32460 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.4e-15 85.5 100 45.0
BraA01t03130Z Brassica rapa HOM05D007338 ORTHO05D009406 4.1e-15 84.7 90 50.0
BraA01t03136Z Brassica rapa HOM05D007338 ORTHO05D009406 5.4e-15 84.3 90 48.9
BcaC06g31804 Brassica carinata HOM05D007338 ORTHO05D009406 1.6e-14 82.8 92 47.8
SpUn1255_0010 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.6e-14 82.8 101 42.6
BcaC06g31805 Brassica carinata HOM05D007338 ORTHO05D009406 3.5e-14 81.6 92 47.8
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.0e-13 80.1 92 48.9
Sp7g00850 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.0e-13 80.1 98 42.9
BraA01t03135Z Brassica rapa HOM05D007338 ORTHO05D009406 1.3e-13 79.7 90 46.7
BcaC09g49315 Brassica carinata HOM05D007338 ORTHO05D009406 1.9e-12 75.9 90 46.7
Sp3g31250 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.5e-12 74.3 97 41.2
Carub.0005s1074 Capsella rubella HOM05D007338 ORTHO05D009406 1.2e-11 73.2 97 42.3
Carub.0005s1072 Capsella rubella HOM05D007338 ORTHO05D009406 2.1e-11 72.4 97 42.3
BcaC09g49317 Brassica carinata HOM05D007338 ORTHO05D009406 2.8e-11 72.0 90 43.3
Carub.0005s1073 Capsella rubella HOM05D007338 ORTHO05D009406 3.6e-11 71.6 97 41.2
Sp3g31220 Schrenkiella parvula HOM05D007338 ORTHO05D009406 6.1e-11 70.9 74 45.9
BolC1t03760H Brassica oleracea HOM05D007338 ORTHO05D009406 1.2e-09 66.6 45 62.2
BolC9t55036H Brassica oleracea HOM05D007338 ORTHO05D009406 1.8e-07 59.3 75 45.3
CARHR284260 Cardamine hirsuta HOM05D007338 ORTHO05D009406 1.8e-07 59.3 47 55.3
CARHR101940 Cardamine hirsuta HOM05D007338 ORTHO05D009406 1.6e-06 56.2 95 36.8


User provided reference genes

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