Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g03760 Schrenkiella parvula HOM05D007338 ORTHO05D009406 6.7e-50 200.3 95 100.0
BcaC04g22284 Brassica carinata HOM05D007338 ORTHO05D009406 1.8e-31 139.0 96 70.8
A09p17160 Brassica napus HOM05D007338 ORTHO05D009406 1.8e-31 139.0 96 71.9
BcaC04g22279 Brassica carinata HOM05D007338 ORTHO05D009406 7.0e-31 137.1 96 70.8
BolC9t55035H Brassica oleracea HOM05D007338 ORTHO05D009406 7.0e-31 137.1 96 70.8
BcaB07g31240 Brassica carinata HOM05D007338 ORTHO05D009406 1.6e-30 136.0 96 68.8
BcaB07g31238 Brassica carinata HOM05D007338 ORTHO05D009406 3.5e-30 134.8 96 67.7
Sp2g03780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 7.7e-30 133.7 96 65.6
BcaB07g31237 Brassica carinata HOM05D007338 ORTHO05D009406 1.0e-29 133.3 96 68.8
C09p21220 Brassica napus HOM05D007338 ORTHO05D009406 1.0e-29 133.3 96 67.7
C09p21390 Brassica napus HOM05D007338 ORTHO05D009406 4.7e-27 124.4 95 66.3
A09p17150 Brassica napus HOM05D007338 ORTHO05D009406 1.2e-25 119.8 78 73.1
BraA09t37346Z Brassica rapa HOM05D007338 ORTHO05D009406 1.2e-25 119.8 78 73.1
BolC9t55025H Brassica oleracea HOM05D007338 ORTHO05D009406 3.3e-25 118.2 92 62.0
Sp5g03420 Schrenkiella parvula HOM05D007338 ORTHO05D009406 3.3e-25 118.2 94 59.6
Sp4g10780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 4.4e-25 117.9 94 60.6
Sp6g08720 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.2e-24 115.5 94 59.6
Sp5g03400 Schrenkiella parvula HOM05D007338 ORTHO05D009406 6.3e-24 114.0 94 59.6
Sp6g08680 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.4e-23 112.8 94 60.6
Sp5g03390 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.8e-23 112.5 94 58.5
Sp5g03410 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.9e-22 107.5 94 56.4
C09p21400 Brassica napus HOM05D007338 ORTHO05D009406 7.7e-22 107.1 95 58.9
C09p21230 Brassica napus HOM05D007338 ORTHO05D009406 5.2e-18 94.4 92 54.3
BcaB06g27588 Brassica carinata HOM05D007338 ORTHO05D009406 7.5e-17 90.5 96 47.9
BcaB06g27589 Brassica carinata HOM05D007338 ORTHO05D009406 7.5e-17 90.5 96 47.9
AT3G59930 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 9.8e-17 90.1 91 52.7
Sp5g03380 Schrenkiella parvula HOM05D007338 ORTHO05D009406 9.8e-17 90.1 73 54.8
AT5G33355 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 4.8e-16 87.8 91 51.6
BcaC07g40398 Brassica carinata HOM05D007338 ORTHO05D009406 4.8e-16 87.8 92 46.7
A04p14100 Brassica napus HOM05D007338 ORTHO05D009406 8.3e-16 87.0 96 45.8
BraA04t17071Z Brassica rapa HOM05D007338 ORTHO05D009406 8.3e-16 87.0 96 45.8
AL5G42110 Arabidopsis lyrata HOM05D007338 ORTHO05D009406 1.1e-15 86.7 91 50.5
Carub.0005s1075 Capsella rubella HOM05D007338 ORTHO05D009406 2.4e-15 85.5 91 48.4
C04p48140 Brassica napus HOM05D007338 ORTHO05D009406 3.1e-15 85.1 96 44.8
BolC4t26404H Brassica oleracea HOM05D007338 ORTHO05D009406 3.1e-15 85.1 96 44.8
Carub.0005s1076 Capsella rubella HOM05D007338 ORTHO05D009406 7.7e-14 80.5 91 46.2
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.0e-13 80.1 92 50.0
BcaB04g20323 Brassica carinata HOM05D007338 ORTHO05D009406 6.5e-13 77.4 90 46.7
BcaB04g20324 Brassica carinata HOM05D007338 ORTHO05D009406 6.5e-13 77.4 90 45.6
BcaC09g49321 Brassica carinata HOM05D007338 ORTHO05D009406 6.5e-13 77.4 90 45.6
C01p37930 Brassica napus HOM05D007338 ORTHO05D009406 6.5e-13 77.4 90 45.6
BcaC09g49311 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
BcaC09g49314 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
BcaC09g49318 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
BcaC09g49319 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
BcaC09g49324 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
A01p29990 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
A01p30010 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
A01p30020 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
A01p30030 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
A01p30070 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
C01p37910 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
C01p37950 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
C01p37970 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
C01p37980 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
C01p38030 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
BraA01t03132Z Brassica rapa HOM05D007338 ORTHO05D009406 1.1e-12 76.6 90 45.6
BcaB08g34762 Brassica carinata HOM05D007338 ORTHO05D009406 1.5e-12 76.3 99 39.4
BcaC09g49320 Brassica carinata HOM05D007338 ORTHO05D009406 1.5e-12 76.3 90 44.4
A01p30000 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-12 76.3 90 44.4
A01p30050 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-12 76.3 90 45.6
C01p37940 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-12 76.3 90 44.4
A01p30040 Brassica napus HOM05D007338 ORTHO05D009406 2.5e-12 75.5 90 45.6
BcaC09g49316 Brassica carinata HOM05D007338 ORTHO05D009406 3.2e-12 75.1 90 44.4
C01p38000 Brassica napus HOM05D007338 ORTHO05D009406 3.2e-12 75.1 90 44.4
Sp7g00850 Schrenkiella parvula HOM05D007338 ORTHO05D009406 3.2e-12 75.1 98 42.9
BcaC09g49309 Brassica carinata HOM05D007338 ORTHO05D009406 4.2e-12 74.7 90 44.4
C01p38060 Brassica napus HOM05D007338 ORTHO05D009406 4.2e-12 74.7 90 44.4
A01p30060 Brassica napus HOM05D007338 ORTHO05D009406 5.5e-12 74.3 90 45.6
Sp3g32460 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.5e-12 74.3 101 39.6
BcaC09g49322 Brassica carinata HOM05D007338 ORTHO05D009406 9.5e-12 73.6 90 43.3
C01p37920 Brassica napus HOM05D007338 ORTHO05D009406 9.5e-12 73.6 90 43.3
C01p37960 Brassica napus HOM05D007338 ORTHO05D009406 2.8e-11 72.0 88 43.2
BcaC06g31804 Brassica carinata HOM05D007338 ORTHO05D009406 4.7e-11 71.2 91 41.8
BcaC06g31805 Brassica carinata HOM05D007338 ORTHO05D009406 1.0e-10 70.1 91 41.8
BcaC09g49310 Brassica carinata HOM05D007338 ORTHO05D009406 1.4e-10 69.7 91 42.9
C01p38040 Brassica napus HOM05D007338 ORTHO05D009406 1.4e-10 69.7 91 42.9
BolC1t03768H Brassica oleracea HOM05D007338 ORTHO05D009406 1.4e-10 69.7 91 42.9
SpUn1255_0010 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.8e-10 69.3 100 39.0
BraA01t03137Z Brassica rapa HOM05D007338 ORTHO05D009406 4.0e-10 68.2 90 41.1
BraA01t03129Z Brassica rapa HOM05D007338 ORTHO05D009406 5.2e-10 67.8 90 41.1
BraA01t03131Z Brassica rapa HOM05D007338 ORTHO05D009406 5.2e-10 67.8 90 41.1
BraA01t03133Z Brassica rapa HOM05D007338 ORTHO05D009406 5.2e-10 67.8 90 41.1
BraA01t03134Z Brassica rapa HOM05D007338 ORTHO05D009406 5.2e-10 67.8 90 41.1
BraA01t03136Z Brassica rapa HOM05D007338 ORTHO05D009406 6.8e-10 67.4 90 41.1
C01p38020 Brassica napus HOM05D007338 ORTHO05D009406 2.0e-09 65.9 90 41.1
BolC1t03766H Brassica oleracea HOM05D007338 ORTHO05D009406 2.0e-09 65.9 90 41.1
Carub.0005s1074 Capsella rubella HOM05D007338 ORTHO05D009406 2.0e-09 65.9 95 47.4
Carub.0005s1072 Capsella rubella HOM05D007338 ORTHO05D009406 2.6e-09 65.5 95 46.3
Carub.0005s1073 Capsella rubella HOM05D007338 ORTHO05D009406 5.7e-09 64.3 95 45.3
BraA01t03130Z Brassica rapa HOM05D007338 ORTHO05D009406 9.8e-09 63.5 90 42.2
BraA01t03135Z Brassica rapa HOM05D007338 ORTHO05D009406 3.7e-08 61.6 90 38.9
Sp7g07650 Schrenkiella parvula HOM05D007338 ORTHO05D009406 9.2e-07 57.0 96 36.5
BolC9t55036H Brassica oleracea HOM05D007338 ORTHO05D009406 2.7e-06 55.5 75 48.0
CARHR101940 Cardamine hirsuta HOM05D007338 ORTHO05D009406 3.5e-06 55.1 92 38.0


User provided reference genes

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