Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g03040 Schrenkiella parvula HOM05D008190 ORTHO05D010344 3.5e-36 154.5 79 100.0
AL2G14690 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 6.2e-25 117.1 73 79.5
C01p38420 Brassica napus HOM05D008190 ORTHO05D010344 1.4e-24 115.9 75 77.3
BolC1t03807H Brassica oleracea HOM05D008190 ORTHO05D010344 1.4e-24 115.9 75 77.3
BolC1t03808H Brassica oleracea HOM05D008190 ORTHO05D010344 1.4e-24 115.9 75 77.3
A01p30280 Brassica napus HOM05D008190 ORTHO05D010344 2.6e-23 111.7 74 75.7
BraA01t03163Z Brassica rapa HOM05D008190 ORTHO05D010344 2.6e-23 111.7 74 75.7
A01p30270 Brassica napus HOM05D008190 ORTHO05D010344 3.2e-21 104.8 75 70.7
BraA01t03162Z Brassica rapa HOM05D008190 ORTHO05D010344 3.2e-21 104.8 75 70.7
C01p38410 Brassica napus HOM05D008190 ORTHO05D010344 1.2e-20 102.8 74 70.3
BcaB04g20338 Brassica carinata HOM05D008190 ORTHO05D010344 3.5e-20 101.3 74 73.0
Thhalv10024096m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 3.5e-20 101.3 73 67.1
Carub.0002s0363 Capsella rubella HOM05D008190 ORTHO05D010344 6.0e-20 100.5 72 66.7
BcaB04g20339 Brassica carinata HOM05D008190 ORTHO05D010344 7.8e-20 100.1 74 71.6
BcaB04g20340 Brassica carinata HOM05D008190 ORTHO05D010344 7.8e-20 100.1 74 71.6
BcaB04g20342 Brassica carinata HOM05D008190 ORTHO05D010344 7.8e-20 100.1 74 71.6
BcaC04g22332 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BcaC04g22333 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BcaC04g22334 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BcaC04g22335 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BcaC04g22336 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BcaC04g22337 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BcaC04g22338 Brassica carinata HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
C09p20440 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
C09p20450 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
C09p20460 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
C09p20470 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
C09p20480 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BolC9t54948H Brassica oleracea HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BolC9t54950H Brassica oleracea HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BolC9t54951H Brassica oleracea HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BolC9t54952H Brassica oleracea HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
BolC9t54953H Brassica oleracea HOM05D008190 ORTHO05D010344 1.0e-19 99.8 73 69.9
A09p16740 Brassica napus HOM05D008190 ORTHO05D010344 1.7e-19 99.0 73 68.5
A09p16750 Brassica napus HOM05D008190 ORTHO05D010344 1.7e-19 99.0 73 68.5
BraA09t37311Z Brassica rapa HOM05D008190 ORTHO05D010344 1.7e-19 99.0 73 68.5
BraA09t37312Z Brassica rapa HOM05D008190 ORTHO05D010344 1.7e-19 99.0 73 68.5
BcaC04g22331 Brassica carinata HOM05D008190 ORTHO05D010344 3.9e-19 97.8 73 68.5
C09p20500 Brassica napus HOM05D008190 ORTHO05D010344 3.9e-19 97.8 73 68.5
BolC9t54955H Brassica oleracea HOM05D008190 ORTHO05D010344 3.9e-19 97.8 73 68.5
Carub.0002s0365 Capsella rubella HOM05D008190 ORTHO05D010344 6.6e-19 97.1 73 67.1
AL2G14700 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 8.7e-19 96.7 74 66.2
AT1G61566 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 8.7e-19 96.7 74 67.6
AT2G22055 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 8.7e-19 96.7 73 67.1
Thhalv10024053m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 1.1e-18 96.3 72 65.3
CARHR050840 Cardamine hirsuta HOM05D008190 ORTHO05D010344 1.6e-17 92.4 75 62.7
AL8G22740 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 2.4e-16 88.6 70 64.3
BcaB04g20341 Brassica carinata HOM05D008190 ORTHO05D010344 5.3e-16 87.4 61 70.5
AT1G61563 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 6.9e-16 87.0 73 61.6
BcaC04g22340 Brassica carinata HOM05D008190 ORTHO05D010344 2.6e-15 85.1 72 58.3
C09p20430 Brassica napus HOM05D008190 ORTHO05D010344 2.6e-15 85.1 72 58.3
BolC9t54947H Brassica oleracea HOM05D008190 ORTHO05D010344 2.6e-15 85.1 72 58.3
AL2G14720 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 4.5e-15 84.3 72 61.1
CARHR050830 Cardamine hirsuta HOM05D008190 ORTHO05D010344 9.9e-15 83.2 73 58.9
C02p06600 Brassica napus HOM05D008190 ORTHO05D010344 6.4e-14 80.5 73 56.2
BcaC03g13507 Brassica carinata HOM05D008190 ORTHO05D010344 1.1e-13 79.7 73 58.9
BolC2t06606H Brassica oleracea HOM05D008190 ORTHO05D010344 1.1e-13 79.7 73 58.9
BolC9t54949H Brassica oleracea HOM05D008190 ORTHO05D010344 1.1e-13 79.7 65 67.7
BcaC09g50377 Brassica carinata HOM05D008190 ORTHO05D010344 1.4e-13 79.3 73 58.9
A02p02380 Brassica napus HOM05D008190 ORTHO05D010344 1.9e-13 79.0 73 57.5
BraA02t05208Z Brassica rapa HOM05D008190 ORTHO05D010344 1.9e-13 79.0 73 57.5
Aa31LG2G9270 Aethionema arabicum HOM05D008190 ORTHO05D010344 1.2e-12 76.3 72 54.2
Aa31LG5G4450 Aethionema arabicum HOM05D008190 ORTHO05D010344 4.0e-08 61.2 76 44.7
Aa31LG6G5470 Aethionema arabicum HOM05D008190 ORTHO05D010344 9.0e-08 60.1 47 55.3


User provided reference genes

Program Settings