Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.7e-188 662.5 347 100.0
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.3e-175 619.8 348 92.8
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 4.8e-170 601.3 348 89.7
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 3.4e-168 595.1 347 88.5
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 7.6e-168 594.0 347 88.2
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 2.9e-167 592.0 347 87.3
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 8.4e-167 590.5 347 87.0
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 8.4e-167 590.5 347 87.0
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 2.4e-166 589.0 349 88.3
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 2.4e-166 589.0 349 88.3
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 2.4e-166 589.0 349 88.3
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 9.3e-166 587.0 349 86.5
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 2.1e-165 585.9 347 84.4
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 2.1e-165 585.9 347 87.0
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 2.1e-165 585.9 347 87.0
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.0e-164 583.6 347 86.2
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 1.2e-160 570.1 349 84.0
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 3.7e-154 548.5 338 81.7
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 2.1e-149 532.7 348 77.9
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.5e-136 490.0 347 70.9
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 3.3e-131 472.2 338 67.5
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 9.7e-131 470.7 337 71.2
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 9.7e-131 470.7 337 67.7
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.1e-129 467.2 339 68.7
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.4e-129 466.8 339 68.1
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 3.1e-129 465.7 320 71.6
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 1.2e-128 463.8 337 67.7
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 8.5e-127 457.6 338 67.8
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 8.5e-127 457.6 338 67.8
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 1.9e-126 456.4 349 65.0
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 5.5e-126 454.9 338 67.5
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 1.6e-125 453.4 338 66.6
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.0e-124 449.1 347 63.4
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 8.8e-124 447.6 316 67.7
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 8.8e-124 447.6 350 62.9
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 8.8e-124 447.6 330 67.3
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.1e-123 447.2 349 62.8
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 1.5e-123 446.8 343 66.2
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 2.0e-123 446.4 347 67.4
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 2.6e-123 446.0 363 61.2
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.6e-123 446.0 336 67.3
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 3.3e-123 445.7 322 68.3
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.4e-123 445.3 336 66.4
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 2.8e-122 442.6 343 64.4
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.4e-121 440.3 348 64.4
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 1.8e-121 439.9 340 65.9
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 7.0e-121 438.0 341 64.8
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 2.6e-120 436.0 355 63.4
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 7.7e-120 434.5 347 64.6
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.0e-119 434.1 317 66.6
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 1.7e-119 433.3 347 64.3
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 3.8e-119 432.2 337 63.8
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 5.0e-119 431.8 345 63.8
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 6.5e-119 431.4 344 64.2
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 6.5e-119 431.4 344 64.2
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 8.5e-119 431.0 340 64.4
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 1.1e-118 430.6 340 66.2
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 2.5e-118 429.5 347 64.3
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 2.5e-118 429.5 345 64.3
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 3.2e-118 429.1 314 64.6
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 7.2e-118 427.9 340 65.0
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 1.6e-117 426.8 346 62.7
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.1e-117 426.4 347 63.4
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 2.7e-117 426.0 332 64.8
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 3.6e-117 425.6 355 60.3
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 4.7e-117 425.2 317 67.8
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 1.0e-116 424.1 341 63.3
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 4.0e-116 422.2 346 62.7
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 5.2e-116 421.8 318 67.3
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.2e-115 420.6 321 66.7
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 1.5e-115 420.2 338 61.8
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.8e-114 416.0 340 63.2
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 2.4e-113 412.9 345 62.3
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 2.4e-113 412.9 342 59.9
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 3.1e-113 412.5 330 64.2
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 5.3e-113 411.8 353 59.8
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 5.3e-113 411.8 340 60.9
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 5.3e-113 411.8 342 60.8
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 1.2e-112 410.6 349 60.7
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 2.7e-112 409.5 341 59.5
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 3.5e-112 409.1 339 61.7
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 5.9e-112 408.3 350 56.6
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 7.7e-112 407.9 339 61.7
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 1.7e-111 406.8 348 59.2
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 1.7e-111 406.8 340 60.0
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 3.8e-111 405.6 344 60.5
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 6.5e-111 404.8 338 58.6
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 6.5e-111 404.8 338 58.6
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 1.1e-110 404.1 343 58.9
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 1.5e-110 403.7 317 62.5
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.6e-109 400.2 335 62.4
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 2.1e-109 399.8 318 61.3
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 3.0e-108 396.0 340 60.0
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 8.8e-108 394.4 333 60.1
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 2.6e-107 392.9 347 58.2
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 3.4e-107 392.5 336 60.4
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 4.4e-107 392.1 339 60.8
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.3e-106 390.6 331 61.0
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 4.8e-106 388.7 318 61.9
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-105 387.5 334 58.4
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 5.4e-105 385.2 339 56.6
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 4.5e-104 382.1 349 58.2
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 1.7e-103 380.2 349 58.2
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 3.8e-103 379.0 350 58.0
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.5e-102 377.1 342 55.8
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 1.9e-102 376.7 348 58.9
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 3.3e-102 375.9 269 67.3
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 6.1e-101 371.7 351 55.8
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 6.1e-101 371.7 351 55.8
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 5.2e-100 368.6 319 58.3
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 9.8e-99 364.4 272 67.6
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 1.7e-98 363.6 305 59.0
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 1.3e-95 354.0 312 57.4
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 1.7e-95 353.6 349 54.2
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 1.7e-95 353.6 325 56.6
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 6.6e-95 351.7 336 51.8
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.2e-93 347.4 304 58.2
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 4.7e-93 345.5 344 52.0
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 4.7e-93 345.5 340 53.8
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 6.1e-93 345.1 336 54.8
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.0e-92 344.4 330 53.3
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.2e-91 340.9 339 50.4
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 2.6e-91 339.7 336 53.3
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 2.6e-91 339.7 339 50.1
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 3.4e-91 339.3 336 54.2
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 9.8e-91 337.8 339 50.1
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 1.3e-90 337.4 333 50.2
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 8.3e-90 334.7 341 51.3
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.9e-89 333.6 330 49.7
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 9.2e-89 331.3 340 51.5
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 1.2e-88 330.9 257 63.8
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 3.5e-88 329.3 318 53.5
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 6.0e-88 328.6 343 51.9
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.4e-84 317.4 320 50.0
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 1.4e-84 317.4 341 48.4
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.2e-83 314.3 268 57.5
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 7.5e-83 311.6 334 47.3
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 9.8e-83 311.2 255 61.6
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 6.4e-82 308.5 336 45.5
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 8.3e-82 308.1 334 48.5
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 3.2e-81 306.2 268 58.6
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 1.6e-80 303.9 344 44.8
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 5.6e-78 295.4 313 47.3
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 2.8e-77 293.1 283 51.6
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 3.6e-77 292.7 361 47.6
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 3.4e-75 286.2 189 70.9
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.2e-74 283.5 189 71.4
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 8.3e-74 281.6 191 69.1
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 7.8e-72 275.0 228 61.0
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.7e-71 273.9 179 68.7
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-68 264.6 189 65.6
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 2.4e-68 263.5 313 48.2
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.2e-67 261.2 190 66.3
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 5.8e-67 258.8 166 81.3
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.4e-60 237.7 182 65.4
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.2e-59 234.6 184 61.4
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 3.8e-58 229.6 246 50.4
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 1.9e-57 227.3 190 58.4
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 2.7e-56 223.4 334 41.3
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 1.0e-55 221.5 227 52.9
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 6.4e-50 202.2 227 54.6
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 8.1e-45 185.3 158 60.8
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 1.7e-42 177.6 335 33.4
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 1.9e-38 164.1 104 81.7
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 1.1e-36 158.3 172 48.8
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 1.8e-36 157.5 173 52.6
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 1.8e-31 141.0 92 71.7
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 1.3e-29 134.8 89 69.7
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 4.8e-29 132.9 95 67.4
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 4.5e-27 126.3 308 31.8
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 3.2e-25 120.2 77 71.4
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 1.5e-22 111.3 75 78.7
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 5.3e-20 102.8 81 59.3
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 1.3e-18 98.2 57 84.2
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 1.3e-18 98.2 80 58.8
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 2.9e-18 97.1 85 54.1
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 1.0e-15 88.6 74 67.6
SMO351G0034 Selaginella moellendorffii HOM05D003755 ORTHO05D376906 8.8e-15 85.5 330 26.7
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 3.3e-14 83.6 57 71.9
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 1.2e-11 75.1 63 58.7
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 1.2e-11 75.1 54 57.4


User provided reference genes

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