Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 4.2e-150 534.6 264 100.0
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 2.2e-127 459.1 267 85.8
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 2.2e-127 459.1 267 85.8
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 2.2e-127 459.1 267 85.8
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.0e-124 450.3 267 85.0
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 2.5e-123 445.7 267 84.3
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.3e-119 433.3 269 83.3
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.4e-118 429.9 269 81.8
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 7.2e-118 427.6 269 82.5
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 8.8e-116 420.6 267 82.0
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 1.3e-111 406.8 260 80.4
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 3.8e-111 405.2 260 80.0
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 4.8e-106 388.3 267 75.3
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 1.2e-96 357.1 269 71.4
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 8.3e-90 334.3 208 80.3
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 1.1e-86 323.9 238 70.6
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 1.9e-86 323.2 207 77.3
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 2.5e-86 322.8 201 79.6
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 3.2e-86 322.4 281 63.0
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 9.4e-86 320.9 201 78.6
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 9.4e-86 320.9 201 79.1
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.2e-85 320.5 201 79.1
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.6e-85 320.1 200 79.0
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 2.7e-85 319.3 200 77.5
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 2.7e-85 319.3 201 79.1
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 6.1e-85 318.2 207 76.8
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 6.1e-85 318.2 225 71.6
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 8.0e-85 317.8 201 77.6
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.4e-84 317.0 276 63.0
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.8e-84 316.6 201 76.6
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 4.0e-84 315.5 200 78.0
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 5.2e-84 315.1 235 69.8
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 2.0e-83 313.2 236 65.7
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 2.0e-83 313.2 201 76.6
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 2.0e-83 313.2 224 69.6
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 2.6e-83 312.8 200 76.0
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 5.7e-83 311.6 241 67.2
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 9.8e-83 310.8 196 76.5
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 9.8e-83 310.8 200 75.0
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 1.3e-82 310.5 235 67.7
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 1.7e-82 310.1 244 64.8
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 2.8e-82 309.3 246 65.9
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 2.8e-82 309.3 231 68.0
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 3.7e-82 308.9 202 75.2
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 4.9e-82 308.5 199 75.4
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 6.3e-82 308.1 246 65.4
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 6.3e-82 308.1 201 74.6
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 6.3e-82 308.1 240 68.3
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 8.3e-82 307.8 279 59.9
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 8.3e-82 307.8 196 77.0
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 8.3e-82 307.8 196 76.5
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 1.1e-81 307.4 196 76.5
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.4e-81 307.0 203 73.9
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.4e-81 307.0 243 67.1
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.4e-81 307.0 240 68.3
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 2.4e-81 306.2 219 68.9
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.1e-81 305.4 250 66.0
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 9.2e-81 304.3 233 67.0
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 9.2e-81 304.3 199 73.9
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.2e-80 303.9 196 77.0
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 1.2e-80 303.9 220 68.6
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.6e-80 303.5 192 78.6
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.0e-80 303.1 256 62.5
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.5e-80 302.4 200 73.5
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.5e-80 302.4 200 73.5
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 3.5e-80 302.4 201 74.1
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 5.9e-80 301.6 256 62.9
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 7.7e-80 301.2 199 74.9
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 7.7e-80 301.2 191 77.0
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 1.3e-79 300.4 200 72.5
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 1.3e-79 300.4 208 73.6
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.7e-79 300.1 219 69.4
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 3.8e-79 298.9 200 74.0
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 6.6e-79 298.1 189 76.7
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 6.6e-79 298.1 222 67.1
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 2.5e-78 296.2 199 72.9
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 2.5e-78 296.2 186 78.0
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 3.3e-78 295.8 222 67.6
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 5.6e-78 295.0 231 63.6
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 3.6e-77 292.4 230 67.8
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 6.1e-77 291.6 226 65.9
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 8.0e-77 291.2 233 64.4
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 8.0e-77 291.2 191 75.4
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 1.4e-76 290.4 233 64.8
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 2.3e-76 289.7 183 74.9
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.3e-76 289.7 191 75.4
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 2.3e-76 289.7 198 70.7
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 6.8e-76 288.1 241 63.9
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 8.9e-76 287.7 205 70.2
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 7.5e-75 284.6 186 75.3
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 4.9e-74 282.0 236 61.4
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 1.4e-73 280.4 191 70.7
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.0e-71 274.2 217 62.7
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 1.3e-71 273.9 190 71.1
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 1.1e-70 270.8 194 64.9
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 5.6e-70 268.5 187 69.5
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 1.0e-68 264.2 189 67.2
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 6.4e-66 255.0 191 68.1
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.5e-59 233.8 232 57.8
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 2.0e-59 233.4 187 59.9
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 5.8e-59 231.9 162 69.1
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 3.5e-56 222.6 207 53.6
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 7.8e-48 194.9 121 77.7
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 4.7e-45 185.7 103 83.5
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 8.1e-45 184.9 194 48.5
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.6e-24 117.5 103 60.2
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 6.7e-23 112.1 81 70.4
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 1.1e-17 94.7 114 46.5
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 1.4e-17 94.4 152 36.2
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 3.2e-17 93.2 157 38.9
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 9.6e-14 81.6 67 62.7
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 3.8e-10 69.7 87 43.7
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 7.2e-09 65.5 35 91.4
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 2.1e-08 63.9 170 30.0


User provided reference genes

Program Settings