Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g02060 Schrenkiella parvula HOM05D009328 ORTHO05D008690 1.3e-202 709.5 356 100.0
Carub.0002s0245 Capsella rubella HOM05D009328 ORTHO05D008690 7.9e-104 381.3 370 60.0
AL2G13340 Arabidopsis lyrata HOM05D009328 ORTHO05D008690 1.0e-103 380.9 363 61.2
Thhalv10024007m.g Eutrema salsugineum HOM05D009328 ORTHO05D008690 5.1e-103 378.6 365 60.3
AT1G62530 Arabidopsis thaliana HOM05D009328 ORTHO05D008690 1.5e-94 350.5 363 57.9
Sp1g10800 Schrenkiella parvula HOM05D009328 ORTHO05D008690 5.9e-83 312.0 481 44.7
AL1G23390 Arabidopsis lyrata HOM05D009328 ORTHO05D008690 1.0e-82 311.2 495 44.0
Carub.0001s1181 Capsella rubella HOM05D009328 ORTHO05D008690 2.5e-81 306.6 493 43.4
Thhalv10007497m.g Eutrema salsugineum HOM05D009328 ORTHO05D008690 2.3e-79 300.1 484 43.8
AT1G12120 Arabidopsis thaliana HOM05D009328 ORTHO05D008690 7.5e-78 295.0 486 42.8
BolC8t52307H Brassica oleracea HOM05D009328 ORTHO05D008690 1.2e-70 271.2 439 43.3
C08p47680 Brassica napus HOM05D009328 ORTHO05D008690 2.0e-70 270.4 440 43.2
BcaB03g13206 Brassica carinata HOM05D009328 ORTHO05D008690 2.2e-69 266.9 440 44.8
CARHR012480 Cardamine hirsuta HOM05D009328 ORTHO05D008690 1.1e-68 264.6 501 41.9
BraA06t24123Z Brassica rapa HOM05D009328 ORTHO05D008690 1.4e-68 264.2 448 43.3
A06p09350 Brassica napus HOM05D009328 ORTHO05D008690 3.2e-68 263.1 449 43.4
BraA09t41754Z Brassica rapa HOM05D009328 ORTHO05D008690 5.4e-68 262.3 447 41.8
A09p64080 Brassica napus HOM05D009328 ORTHO05D008690 1.2e-67 261.2 447 41.4
A08p32980 Brassica napus HOM05D009328 ORTHO05D008690 1.6e-67 260.8 438 43.6
BraA08t35218Z Brassica rapa HOM05D009328 ORTHO05D008690 1.3e-66 257.7 437 42.6
BolC5t29847H Brassica oleracea HOM05D009328 ORTHO05D008690 1.7e-66 257.3 425 45.2
C08p15230 Brassica napus HOM05D009328 ORTHO05D008690 1.1e-65 254.6 441 43.1
BolC8t49153H Brassica oleracea HOM05D009328 ORTHO05D008690 1.1e-65 254.6 441 43.1
C05p11050 Brassica napus HOM05D009328 ORTHO05D008690 5.6e-65 252.3 425 44.7
BcaB02g06406 Brassica carinata HOM05D009328 ORTHO05D008690 8.0e-64 248.4 449 42.8
BcaC07g41729 Brassica carinata HOM05D009328 ORTHO05D008690 3.7e-61 239.6 442 41.0
BcaB02g06408 Brassica carinata HOM05D009328 ORTHO05D008690 2.7e-59 233.4 412 43.0
THA.LOC104823548 Tarenaya hassleriana HOM05D009328 ORTHO05D008690 7.3e-57 225.3 482 38.8
THA.LOC104818527 Tarenaya hassleriana HOM05D009328 ORTHO05D008690 1.6e-56 224.2 460 39.6
Aa31LG1G2600 Aethionema arabicum HOM05D009328 ORTHO05D008690 2.6e-54 216.9 487 37.8
MD06G1062900 Malus domestica HOM05D007929 ORTHO05D008690 1.8e-23 114.4 243 34.6
TWI60G0818 Tripterygium wilfordii HOM05D007929 ORTHO05D008690 1.5e-22 111.3 222 39.6
MD04G1085400 Malus domestica HOM05D007929 ORTHO05D008690 1.3e-21 108.2 241 35.3
COL.COLO4_37202 Corchorus olitorius HOM05D007929 ORTHO05D008690 1.7e-21 107.8 234 34.6
Duzib084G1023 Durio zibethinus HOM05D007929 ORTHO05D008690 8.4e-21 105.5 364 29.7
Prupe.5G074300 Prunus persica HOM05D007929 ORTHO05D008690 1.4e-20 104.8 177 41.2
FvH4_5g00200 Fragaria vesca HOM05D007929 ORTHO05D008690 3.2e-20 103.6 170 39.4
FAN18G3609 Fragaria x ananassa HOM05D007929 ORTHO05D008690 3.2e-20 103.6 170 39.4
FAN08G2103 Fragaria x ananassa HOM05D007929 ORTHO05D008690 5.5e-20 102.8 193 37.3
Thecc.03G256000 Theobroma cacao HOM05D007929 ORTHO05D008690 5.5e-20 102.8 254 33.9
FAN13G1817 Fragaria x ananassa HOM05D007929 ORTHO05D008690 1.2e-19 101.7 193 37.8
Duzib068G0525 Durio zibethinus HOM05D007929 ORTHO05D008690 2.1e-19 100.9 254 34.3
RcHm_v2.0_Chr7g0202661 Rosa chinensis HOM05D007929 ORTHO05D008690 4.6e-19 99.8 209 34.9
Hund14599 Selenicereus undatus HOM05D007929 ORTHO05D008690 1.3e-18 98.2 199 38.2
Dinv39112 Davidia involucrata HOM05D007929 ORTHO05D008690 1.8e-18 97.8 356 30.1
Gohir.D12G221300 Gossypium hirsutum HOM05D007929 ORTHO05D008690 1.8e-18 97.8 279 31.5
vmacro14098 Vaccinium macrocarpon HOM05D007929 ORTHO05D008690 1.8e-18 97.8 203 34.5
Gorai.008G237100 Gossypium raimondii HOM05D007929 ORTHO05D008690 3.0e-18 97.1 279 30.8
Duzib205G1039 Durio zibethinus HOM05D007929 ORTHO05D008690 3.9e-18 96.7 286 32.2
Gohir.A12G219000 Gossypium hirsutum HOM05D007929 ORTHO05D008690 5.1e-18 96.3 198 37.9
FAN04G0968 Fragaria x ananassa HOM05D007929 ORTHO05D008690 6.7e-18 95.9 193 36.3
Hma1.2p1_1720F.1_g299300 Hydrangea macrophylla HOM05D007929 ORTHO05D008690 8.7e-18 95.5 247 33.6
Dinv21608 Davidia involucrata HOM05D007929 ORTHO05D008690 1.1e-17 95.1 213 32.9
Eucgr.E00452 Eucalyptus grandis HOM05D007929 ORTHO05D008690 1.1e-17 95.1 219 37.0
Hma1.2p1_1720F.1_g299295 Hydrangea macrophylla HOM05D007929 ORTHO05D008690 1.5e-17 94.7 247 33.6
Manes.01G077200 Manihot esculenta HOM05D007929 ORTHO05D008690 3.3e-17 93.6 241 34.9
Ciclev10019204m.g Citrus clementina HOM05D007929 ORTHO05D008690 7.4e-17 92.4 249 32.5
BcaNung05495 Brassica carinata HOM05D009328 ORTHO05D008690 9.6e-17 92.0 271 33.6
Cfa021312 Carpinus fangiana HOM05D007929 ORTHO05D008690 1.6e-16 91.3 212 33.5
Gohir.A08G171000 Gossypium hirsutum HOM05D007929 ORTHO05D008690 1.6e-16 91.3 241 35.3
Actinidia05192 Actinidia chinensis HOM05D007929 ORTHO05D008690 2.1e-16 90.9 180 35.0
CAN.G1217.13 Capsicum annuum HOM05D007929 ORTHO05D008690 2.1e-16 90.9 127 46.5
DCAR_027794 Daucus carota HOM05D007929 ORTHO05D008690 2.1e-16 90.9 180 37.8
AUR62007484 Chenopodium quinoa HOM05D007929 ORTHO05D008690 2.8e-16 90.5 248 31.5
Haze_07866 Corylus avellana HOM05D007929 ORTHO05D008690 2.8e-16 90.5 197 36.0
PGSC0003DMG400004743 Solanum tuberosum HOM05D007929 ORTHO05D008690 2.8e-16 90.5 121 39.7
AUR62039940 Chenopodium quinoa HOM05D007929 ORTHO05D008690 3.7e-16 90.1 251 31.9
Potri.001G121200 Populus trichocarpa HOM05D007929 ORTHO05D008690 3.7e-16 90.1 189 33.9
Sopen08g027490 Solanum pennellii HOM05D007929 ORTHO05D008690 3.7e-16 90.1 123 43.9
Gohir.D08G189300 Gossypium hirsutum HOM05D007929 ORTHO05D008690 4.8e-16 89.7 209 37.3
Nitab4.5_0009716g0010 Nicotiana tabacum HOM05D007929 ORTHO05D008690 4.8e-16 89.7 117 42.7
QL12p013187 Quercus lobata HOM05D007929 ORTHO05D008690 4.8e-16 89.7 200 34.5
Ah.12g056550 Amaranthus hybridus HOM05D007929 ORTHO05D008690 8.1e-16 89.0 242 31.8
EL10Ac5g13019 Beta vulgaris HOM05D007929 ORTHO05D008690 8.1e-16 89.0 114 43.9
Sabra01G0093400 Salix brachista HOM05D007929 ORTHO05D008690 8.1e-16 89.0 188 35.6
MELO3C005557.2 Cucumis melo HOM05D007929 ORTHO05D008690 1.4e-15 88.2 252 30.2
Gorai.004G199400 Gossypium raimondii HOM05D007929 ORTHO05D008690 1.8e-15 87.8 209 35.4
Manes.02G036501 Manihot esculenta HOM05D007929 ORTHO05D008690 4.0e-15 86.7 190 39.5
Nitab4.5_0000993g0050 Nicotiana tabacum HOM05D007929 ORTHO05D008690 4.0e-15 86.7 117 41.9
Solyc08g079030.4 Solanum lycopersicum HOM05D007929 ORTHO05D008690 4.0e-15 86.7 238 32.8
CiPaw.12G107500 Carya illinoinensis HOM05D007929 ORTHO05D008690 1.2e-14 85.1 146 38.4
Rhsim07G0105500 Rhododendron simsii HOM05D007929 ORTHO05D008690 1.5e-14 84.7 204 31.9
Sc22g0000740 Simmondsia chinensis HOM05D007929 ORTHO05D008690 1.5e-14 84.7 209 33.0
Actinidia27458 Actinidia chinensis HOM05D007929 ORTHO05D008690 2.0e-14 84.3 178 34.3
ClCG01G003880 Citrullus lanatus HOM05D007929 ORTHO05D008690 2.0e-14 84.3 180 37.2
CsaV3_5G004010 Cucumis sativus L. HOM05D007929 ORTHO05D008690 2.0e-14 84.3 205 34.6
Sed0000260 Sechium edule HOM05D007929 ORTHO05D008690 2.0e-14 84.3 202 34.7
Peaxi162Scf00002g00920 Petunia axillaris HOM05D007929 ORTHO05D008690 2.6e-14 84.0 103 46.6
Potri.003G112000 Populus trichocarpa HOM05D007929 ORTHO05D008690 3.4e-14 83.6 197 32.5
Nn6g34027 Nelumbo nucifera HOM05D007929 ORTHO05D008690 1.3e-13 81.6 191 36.1
Nn1g01073 Nelumbo nucifera HOM05D007929 ORTHO05D008690 3.8e-13 80.1 346 29.8
MBI04_g37591_MAGBIO Magnolia biondii HOM05D007929 ORTHO05D008690 6.5e-13 79.3 263 28.9
Oeu029333.1 Olea europaea HOM05D007929 ORTHO05D008690 6.5e-13 79.3 108 49.1
Sabra03G0077700 Salix brachista HOM05D007929 ORTHO05D008690 6.5e-13 79.3 181 36.5
ECA233G5449 Erigeron canadensis HOM05D007929 ORTHO05D008690 1.1e-12 78.6 196 36.2
Migut.A00812 Erythranthe guttata HOM05D007929 ORTHO05D008690 1.9e-12 77.8 208 33.2
HanXRQChr13g0394961 Helianthus annuus HOM05D007929 ORTHO05D008690 7.1e-12 75.9 199 34.7
Lsat_1_v5_gn_6_1860 Lactuca sativa HOM05D007929 ORTHO05D008690 7.1e-12 75.9 177 39.0
arahy.Tifrunner.gnm1.ann1.S80PKI Arachis hypogaea HOM05D007929 ORTHO05D008690 1.2e-11 75.1 209 33.5
MSTRG.25535 Avicennia marina HOM05D007929 ORTHO05D008690 1.8e-10 71.2 141 35.5
Cc08_g12850 Coffea canephora HOM05D007929 ORTHO05D008690 1.1e-09 68.6 69 47.8
TAR374G1634 Trochodendron aralioides HOM05D007929 ORTHO05D008690 1.1e-09 68.6 266 31.2
HPP92_015027 Vanilla planifolia HOM05D007929 ORTHO05D008690 1.9e-09 67.8 212 29.2
Actinidia01970 Actinidia chinensis HOM05D001536 ORTHO05D001442 2.1e-08 64.3 244 27.5
HPP92_007417 Vanilla planifolia HOM05D007929 ORTHO05D008690 2.1e-08 64.3 163 33.7
Actinidia01963 Actinidia chinensis HOM05D001536 ORTHO05D001442 8.2e-08 62.4 244 27.0
MD06G1199000 Malus domestica HOM05D001536 ORTHO05D001442 3.1e-07 60.5 102 38.2
HanXRQChr15g0477041 Helianthus annuus HOM05D001536 ORTHO05D001442 6.9e-07 59.3 208 29.8
AUR62008481 Chenopodium quinoa HOM05D001536 ORTHO05D001442 9.0e-07 58.9 286 23.8
DCAR_007180 Daucus carota HOM05D001536 ORTHO05D001442 9.0e-07 58.9 169 32.5
Lj4g0023409 Lotus japonicus HOM05D001536 ORTHO05D001442 1.2e-06 58.5 79 40.5
Aqoxy3G00455 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 2.0e-06 57.8 187 27.8
Dinv11493 Davidia involucrata HOM05D001536 ORTHO05D001442 2.0e-06 57.8 147 34.7
TPR.G1992 Trifolium pratense HOM05D001536 ORTHO05D001442 2.0e-06 57.8 261 28.7
CANSAT50G0006 Cannabis sativa HOM05D001536 ORTHO05D001442 2.6e-06 57.4 152 28.9
BcaNung05497 Brassica carinata HOM05D009328 ORTHO05D008690 3.4e-06 57.0 46 63.0
Dinv33801 Davidia involucrata HOM05D001536 ORTHO05D001442 5.9e-06 56.2 208 29.8
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 7.6e-06 55.8 81 42.0
vmacro17582 Vaccinium macrocarpon HOM05D001536 ORTHO05D001442 7.6e-06 55.8 273 25.6
Potri.017G088900 Populus trichocarpa HOM05D001536 ORTHO05D001442 1.0e-05 55.5 76 40.8


User provided reference genes

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