Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.7e-293 1011.9 516 100.0
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 7.4e-252 873.6 474 93.7
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 1.8e-250 869.0 476 92.0
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 5.3e-250 867.5 477 92.2
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 3.2e-247 858.2 479 91.9
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 5.1e-245 850.9 465 93.5
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 2.5e-244 848.6 479 91.0
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 2.5e-244 848.6 479 91.0
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.3e-240 836.3 469 91.9
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 1.7e-240 835.9 482 90.0
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 2.9e-240 835.1 470 91.3
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 7.9e-230 800.4 493 83.8
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 3.8e-224 781.6 471 84.5
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 4.5e-201 704.9 475 75.6
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 1.3e-192 676.8 476 73.7
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 7.8e-185 651.0 459 71.9
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 8.1e-182 641.0 466 70.2
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 1.1e-181 640.6 458 69.9
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 4.4e-180 635.2 468 70.1
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 8.3e-179 630.9 456 70.0
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 1.1e-178 630.6 462 69.9
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 2.4e-178 629.4 444 71.2
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 4.1e-178 628.6 455 70.5
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 1.2e-177 627.1 470 68.7
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 1.6e-177 626.7 450 70.2
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 2.1e-177 626.3 455 70.8
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 3.5e-177 625.5 459 71.2
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 4.6e-177 625.2 474 68.1
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 6.0e-177 624.8 482 65.4
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 1.7e-176 623.2 452 69.0
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 3.0e-176 622.5 441 71.0
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 3.0e-176 622.5 479 67.6
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 1.1e-175 620.5 455 71.6
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 2.5e-175 619.4 471 68.8
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 2.5e-175 619.4 456 68.9
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 3.3e-175 619.0 468 70.7
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 4.3e-175 618.6 451 68.7
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 4.3e-175 618.6 468 67.9
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 7.3e-175 617.8 453 68.7
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 1.6e-174 616.7 453 69.1
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 1.6e-174 616.7 450 69.1
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.1e-174 616.3 461 70.5
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 2.8e-174 615.9 462 67.5
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 2.8e-174 615.9 489 65.2
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 3.6e-174 615.5 457 70.7
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 3.6e-174 615.5 457 70.7
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 4.7e-174 615.1 455 68.4
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 6.2e-174 614.8 461 70.3
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 6.2e-174 614.8 455 69.5
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 8.1e-174 614.4 466 68.5
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.4e-173 613.6 457 70.5
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 1.8e-173 613.2 455 68.8
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 2.4e-173 612.8 439 71.1
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 2.4e-173 612.8 472 66.7
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 3.1e-173 612.5 452 69.0
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 5.8e-172 608.2 453 70.0
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 1.3e-171 607.1 456 68.6
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 1.4e-170 603.6 489 64.2
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 2.7e-169 599.4 464 65.1
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 3.5e-169 599.0 462 66.2
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 4.6e-169 598.6 447 67.6
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 4.6e-169 598.6 464 64.9
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 4.6e-169 598.6 462 66.2
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 7.8e-169 597.8 457 65.9
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 9.6e-167 590.9 493 62.7
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 6.2e-166 588.2 458 65.7
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 1.1e-165 587.4 453 67.8
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 9.9e-164 580.9 432 70.1
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 2.2e-163 579.7 458 64.8
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 1.1e-159 567.4 459 63.6
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 4.3e-159 565.5 422 70.1
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 5.6e-159 565.1 447 63.5
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 2.4e-157 559.7 445 63.4
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 1.3e-155 553.9 553 55.3
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 1.1e-154 550.8 423 69.3
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 9.3e-154 547.7 314 89.8
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 7.9e-153 544.7 460 62.6
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 1.8e-152 543.5 454 62.6
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 6.7e-152 541.6 440 64.8
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 5.6e-151 538.5 451 61.0
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 6.9e-149 531.6 440 63.6
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 1.9e-146 523.5 529 55.6
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 1.2e-145 520.8 471 56.5
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 2.7e-145 519.6 367 72.8
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 4.5e-140 502.3 455 58.5
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 5.5e-138 495.4 462 58.4
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 7.9e-137 491.5 393 65.1
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 6.3e-134 481.9 404 65.6
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 4.1e-133 479.2 454 58.6
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 9.0e-133 478.0 373 67.6
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 5.0e-131 472.2 469 58.2
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 6.1e-129 465.3 460 58.0
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 7.9e-129 464.9 502 54.2
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 1.3e-126 457.6 458 54.8
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.3e-123 447.6 342 67.5
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 2.7e-121 439.9 488 51.4
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 2.0e-119 433.7 318 68.9
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 6.3e-118 428.7 452 52.7
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 1.8e-117 427.2 361 62.9
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 2.7e-113 413.3 330 63.0
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 1.0e-112 411.4 465 49.7
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 3.3e-111 406.4 464 49.1
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 5.7e-111 405.6 445 51.9
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 8.2e-110 401.7 340 64.1
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 6.3e-102 375.6 451 49.4
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 1.8e-101 374.0 267 70.8
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 4.2e-98 362.8 480 44.6
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 2.6e-95 353.6 467 46.5
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 1.2e-92 344.7 263 66.5
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 1.6e-92 344.4 303 56.1
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 1.6e-81 307.8 295 56.6
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 1.0e-80 305.1 385 46.5
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 9.5e-74 282.0 284 56.0
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 2.3e-67 260.8 756 29.1
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.7e-62 244.6 451 36.4
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 8.1e-57 225.7 430 37.2
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 4.9e-54 216.5 156 69.2
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 8.7e-43 179.1 99 86.9
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 2.8e-41 174.1 189 54.0
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 2.0e-39 167.9 153 56.9
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 7.1e-37 159.5 116 72.4
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 2.7e-36 157.5 449 28.3
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 3.4e-31 140.6 175 48.0
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 3.0e-27 127.5 524 26.1
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 1.3e-25 122.1 96 65.6
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 4.8e-25 120.2 67 82.1
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 3.1e-24 117.5 108 60.2
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 4.5e-15 87.0 226 33.2
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 8.8e-11 72.8 64 60.9
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 1.7e-09 68.6 113 38.9
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 2.0e-07 61.6 44 63.6


User provided reference genes

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