Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 5.3e-110 401.0 193 100.0
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-63 246.1 187 65.2
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 8.2e-63 244.2 187 65.2
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.6e-61 239.2 189 63.5
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-60 236.9 188 64.9
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 2.5e-59 232.6 190 62.1
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 2.5e-59 232.6 190 62.1
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 2.6e-56 222.6 222 54.1
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 5.7e-56 221.5 196 58.7
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.4e-54 216.9 176 60.2
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 5.3e-54 214.9 185 56.8
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 1.6e-53 213.4 173 63.6
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.4e-48 195.7 197 52.3
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.7e-47 193.4 190 53.7
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.7e-47 193.4 166 59.6
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 2.7e-45 186.0 175 57.7
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.0e-44 181.8 158 57.6
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 6.5e-44 181.4 191 53.9
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.2e-42 177.2 209 48.8
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.1e-42 176.4 178 52.2
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 2.1e-42 176.4 188 53.7
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 2.1e-42 176.4 188 53.7
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 3.6e-42 175.6 194 52.6
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.8e-39 166.0 184 46.2
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.4e-38 162.9 179 47.5
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 7.0e-38 161.4 177 49.2
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-37 159.8 120 65.8
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 2.0e-37 159.8 176 48.3
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 2.7e-37 159.5 168 48.2
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.5e-37 159.1 162 53.7
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.8e-36 155.6 190 45.8
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.7e-32 141.7 151 51.0
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.2e-31 139.8 150 50.7
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-30 136.7 193 42.5
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-28 130.2 160 45.6
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.9e-28 129.0 152 46.7
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 5.0e-28 128.6 175 41.1
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 3.3e-27 125.9 117 55.6
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.0e-26 121.3 124 48.4
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.2e-24 117.5 168 42.3
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.2e-24 117.5 122 51.6
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 3.4e-24 115.9 177 36.7
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 9.8e-24 114.4 153 41.8
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.7e-23 113.6 176 43.2
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 2.9e-23 112.8 162 37.0
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 9.2e-22 107.8 144 36.8
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-21 107.5 168 38.1
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-21 107.5 134 42.5
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 1.2e-21 107.5 134 42.5
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.2e-21 107.5 161 37.3
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 6.0e-21 105.1 154 39.6
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 7.8e-21 104.8 126 42.1
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 2.3e-20 103.2 136 41.2
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 2.3e-20 103.2 169 38.5
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.0e-20 102.8 148 39.2
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 3.9e-20 102.4 173 39.3
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 5.0e-20 102.1 136 40.4
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 6.6e-20 101.7 153 37.9
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 8.6e-20 101.3 134 41.8
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 8.6e-20 101.3 134 41.8
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-19 100.9 134 41.0
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-19 99.4 139 40.3
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 3.3e-19 99.4 159 37.1
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 5.6e-19 98.6 133 40.6
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 5.6e-19 98.6 153 37.3
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 5.6e-19 98.6 86 54.7
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 1.6e-18 97.1 148 37.2
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 1.6e-18 97.1 148 37.2
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 2.1e-18 96.7 133 39.1
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.1e-18 96.7 133 39.1
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 4.7e-18 95.5 128 39.1
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 8.1e-18 94.7 159 35.8
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 8.1e-18 94.7 159 35.8
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-17 94.4 159 35.2
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 2.3e-17 93.2 137 38.0
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 3.1e-17 92.8 159 35.2
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-16 90.1 159 35.8
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 2.0e-16 90.1 141 38.3
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 2.0e-16 90.1 141 38.3
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.6e-16 89.7 92 44.6
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-15 86.7 138 37.7
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 3.7e-15 85.9 168 33.9
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 4.9e-15 85.5 141 35.5
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 6.4e-15 85.1 155 36.8
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 8.3e-15 84.7 149 36.9
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-14 84.3 150 35.3
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.4e-14 84.0 137 36.5
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.4e-14 83.2 85 51.8
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 2.4e-14 83.2 136 39.0
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 3.2e-14 82.8 158 36.1
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 4.1e-14 82.4 168 32.7
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 4.1e-14 82.4 140 35.7
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 7.1e-14 81.6 144 32.6
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.2e-13 80.9 157 35.7
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 2.7e-13 79.7 103 41.7
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 3.5e-13 79.3 158 32.9
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 3.5e-13 79.3 140 35.0
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 4.6e-13 79.0 131 37.4
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 4.6e-13 79.0 131 37.4
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 6.0e-13 78.6 131 37.4
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 6.0e-13 78.6 141 36.9
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.3e-12 77.4 167 31.1
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 1.7e-12 77.0 121 35.5
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 1.7e-12 77.0 121 35.5
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 3.0e-12 76.3 121 43.0
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 5.1e-12 75.5 97 47.4
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 6.6e-12 75.1 153 34.0
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.1e-11 74.3 123 38.2
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 7.3e-11 71.6 152 34.2
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 9.5e-11 71.2 159 30.8
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 9.5e-11 71.2 131 38.2
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.1e-10 70.1 138 37.0
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 4.7e-10 68.9 131 37.4
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 4.7e-10 68.9 142 36.6
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 6.2e-10 68.6 142 32.4
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 5.2e-09 65.5 115 38.3
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 4.4e-08 62.4 86 44.2
Sp2g01340 Schrenkiella parvula HOM05D007210 ORTHO05D006152 4.4e-08 62.4 66 53.0
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 1.3e-07 60.8 181 31.5
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 2.9e-07 59.7 120 36.7
C04p29420 Brassica napus HOM05D007210 ORTHO05D006152 4.9e-07 58.9 170 27.1
BolC4t24471H Brassica oleracea HOM05D007210 ORTHO05D006152 4.9e-07 58.9 170 27.1
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 6.4e-07 58.5 140 34.3
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 8.4e-07 58.2 126 34.1
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 2.4e-06 56.6 126 33.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.2e-06 56.2 137 35.0
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 4.1e-06 55.8 145 31.7
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 9.2e-06 54.7 140 31.4


User provided reference genes

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