Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g01300 Schrenkiella parvula HOM05D009782 ORTHO05D012950 1.0e-41 172.9 85 100.0
BcaC04g22711 Brassica carinata HOM05D009782 ORTHO05D012950 1.2e-29 132.9 85 77.6
C09p16030 Brassica napus HOM05D009782 ORTHO05D012950 1.2e-29 132.9 85 77.6
BolC9t54518H Brassica oleracea HOM05D009782 ORTHO05D012950 1.2e-29 132.9 85 77.6
BraA09t37005Z Brassica rapa HOM05D009782 ORTHO05D012950 1.3e-28 129.4 85 76.5
Thhalv10023782m.g Eutrema salsugineum HOM05D009782 ORTHO05D012950 1.3e-28 129.4 85 74.1
C09p18830 Brassica napus HOM05D009782 ORTHO05D012950 3.2e-27 124.8 85 68.2
BcaC04g22479 Brassica carinata HOM05D009782 ORTHO05D012950 4.6e-26 120.9 85 65.9
BolC9t54785H Brassica oleracea HOM05D009782 ORTHO05D012950 4.6e-26 120.9 85 65.9
A09p15580 Brassica napus HOM05D009782 ORTHO05D012950 6.0e-26 120.6 85 68.2
BraA09t37198Z Brassica rapa HOM05D009782 ORTHO05D012950 6.0e-26 120.6 85 68.2
AT1G63245 Arabidopsis thaliana HOM05D009782 ORTHO05D012950 3.7e-23 111.3 85 68.2
BcaB07g31394 Brassica carinata HOM05D009782 ORTHO05D012950 2.4e-22 108.6 85 65.9
CARHR048170 Cardamine hirsuta HOM05D009782 ORTHO05D012950 5.5e-19 97.4 85 58.8
AL2G12130 Arabidopsis lyrata HOM05D009782 ORTHO05D012950 2.1e-18 95.5 72 68.1
Carub.0002s0159 Capsella rubella HOM05D009782 ORTHO05D012950 5.1e-17 90.9 87 60.9
AL2G12030 Arabidopsis lyrata HOM05D009782 ORTHO05D012950 8.7e-17 90.1 72 65.3
Aa31LG1G1960 Aethionema arabicum HOM05D009782 ORTHO05D019513 1.0e-12 76.6 87 49.4
Aa31LG2G690 Aethionema arabicum HOM05D009782 ORTHO05D012950 1.4e-11 72.8 87 52.9
C05p10510 Brassica napus HOM05D009782 ORTHO05D019513 2.1e-10 68.9 89 49.4
BolC5t29797H Brassica oleracea HOM05D009782 ORTHO05D019513 2.1e-10 68.9 89 49.4
A06p08900 Brassica napus HOM05D009782 ORTHO05D019513 2.7e-10 68.6 89 49.4
BraA06t24083Z Brassica rapa HOM05D009782 ORTHO05D019513 2.7e-10 68.6 89 49.4
BcaC05g25156 Brassica carinata HOM05D009782 ORTHO05D019513 3.6e-10 68.2 89 49.4
Thecc.03G275000 Theobroma cacao HOM05D008852 ORTHO05D010731 3.1e-06 55.1 89 41.6


User provided reference genes

Program Settings