Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g00500 Schrenkiella parvula HOM05D011647 ORTHO05D013455 2.9e-51 204.9 101 100.0
BraA09t37070Z Brassica rapa HOM05D011647 ORTHO05D013455 4.3e-39 164.5 101 82.2
A09p14210 Brassica napus HOM05D011647 ORTHO05D013455 5.7e-39 164.1 101 82.2
C09p17120 Brassica napus HOM05D011647 ORTHO05D013455 5.7e-39 164.1 101 82.2
BolC9t54611H Brassica oleracea HOM05D011647 ORTHO05D013455 5.7e-39 164.1 101 82.2
BcaC04g22638 Brassica carinata HOM05D011647 ORTHO05D013455 2.8e-38 161.8 101 80.2
Thhalv10023808m.g Eutrema salsugineum HOM05D011647 ORTHO05D013455 2.6e-28 128.6 102 68.6
A09p14200 Brassica napus HOM05D011647 ORTHO05D013455 8.8e-24 113.6 101 56.4
C09p17110 Brassica napus HOM05D011647 ORTHO05D013455 8.8e-24 113.6 101 56.4
BolC9t54610H Brassica oleracea HOM05D000050 ORTHO05D013455 8.8e-24 113.6 101 56.4
BraA09t37069Z Brassica rapa HOM05D011647 ORTHO05D013455 8.8e-24 113.6 101 56.4
AL2G10760 Arabidopsis lyrata HOM05D000619 ORTHO05D001806 5.7e-23 110.9 100 62.0
AT1G64235 Arabidopsis thaliana HOM05D011647 ORTHO05D013455 7.4e-23 110.5 100 57.0
Carub.0002s0055 Capsella rubella HOM05D011647 ORTHO05D013455 3.7e-22 108.2 107 51.4
BcaB07g31516 Brassica carinata HOM05D011647 ORTHO05D013455 8.2e-22 107.1 101 53.5
CARHR046690 Cardamine hirsuta HOM05D011647 ORTHO05D013455 1.9e-18 95.9 105 51.4
CARHR046680 Cardamine hirsuta HOM05D011647 ORTHO05D013455 2.3e-16 89.0 68 57.4
AL2G10740 Arabidopsis lyrata HOM05D011647 ORTHO05D013455 1.1e-15 86.7 95 54.7
AL5G38850 Arabidopsis lyrata HOM05D000889 ORTHO05D000693 2.3e-08 62.4 105 38.1
BcaB05g24199 Brassica carinata HOM05D000889 ORTHO05D000693 4.4e-07 58.2 105 36.2
Thhalv10019362m.g Eutrema salsugineum HOM05D000889 ORTHO05D000693 4.4e-07 58.2 105 37.1
BcaB03g15227 Brassica carinata HOM05D000889 ORTHO05D000693 2.8e-06 55.5 105 36.2
AT3G57310 Arabidopsis thaliana HOM05D000889 ORTHO05D000693 3.7e-06 55.1 105 36.2
BcaC08g46128 Brassica carinata HOM05D000889 ORTHO05D000693 3.7e-06 55.1 105 37.1
Thhalv10029435m.g Eutrema salsugineum HOM05D000889 ORTHO05D000693 3.7e-06 55.1 105 35.2
AL1G18000 Arabidopsis lyrata HOM05D000889 ORTHO05D000693 4.8e-06 54.7 101 36.6
C02p22130 Brassica napus HOM05D000889 ORTHO05D000693 8.2e-06 53.9 105 36.2
BolC2t08349H Brassica oleracea HOM05D000889 ORTHO05D000693 8.2e-06 53.9 105 36.2


User provided reference genes

Program Settings