Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 5.5e-276 953.7 501 100.0
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 2.0e-225 785.8 497 83.9
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 4.5e-214 748.0 497 81.1
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 4.0e-202 708.4 503 78.5
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 1.2e-193 680.2 504 73.6
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 4.7e-187 658.3 507 74.2
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 4.7e-187 658.3 507 74.2
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 1.3e-181 640.2 499 73.7
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 5.1e-181 638.3 517 71.0
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 9.9e-169 597.4 410 79.8
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 4.2e-167 592.0 411 76.6
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 9.3e-167 590.9 413 79.9
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 7.4e-148 528.1 518 58.3
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 1.6e-105 387.5 542 44.3
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 2.0e-105 387.1 517 46.6
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 3.5e-105 386.3 498 46.4
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 5.9e-105 385.6 535 44.3
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 7.7e-105 385.2 526 45.4
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 2.5e-103 380.2 542 44.3
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 3.6e-102 376.3 517 46.0
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 8.9e-101 371.7 521 44.5
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 4.4e-100 369.4 521 44.3
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.1e-98 364.8 521 44.1
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 5.4e-98 362.5 502 45.6
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 1.6e-97 360.9 525 43.4
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 3.5e-97 359.8 525 43.6
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 1.0e-96 358.2 521 43.0
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 5.0e-96 355.9 500 45.0
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 3.6e-94 349.7 508 43.7
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 4.7e-94 349.4 534 43.3
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 2.3e-93 347.1 532 41.9
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 3.1e-93 346.7 529 43.1
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 2.2e-91 340.5 508 42.3
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 3.2e-90 336.7 496 43.8
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 4.1e-90 336.3 526 40.9
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 4.1e-90 336.3 522 41.4
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 6.0e-89 332.4 505 42.6
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 3.0e-88 330.1 497 42.5
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.5e-87 327.8 497 42.1
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.9e-87 327.4 497 42.5
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 4.3e-87 326.2 517 40.4
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 7.3e-87 325.5 504 39.9
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 9.5e-87 325.1 505 41.0
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 1.2e-86 324.7 540 40.7
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 1.6e-86 324.3 517 40.8
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.4e-85 321.2 497 41.6
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 3.7e-83 313.2 523 40.0
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 4.9e-83 312.8 505 39.4
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 3.2e-82 310.1 502 39.0
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.1e-81 307.4 505 41.8
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 3.5e-81 306.6 531 38.8
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 4.6e-81 306.2 532 38.3
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 6.0e-81 305.8 509 40.5
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 7.8e-81 305.4 506 39.9
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 7.8e-81 305.4 450 44.9
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 1.0e-80 305.1 423 45.4
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 1.0e-80 305.1 505 41.6
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 6.6e-80 302.4 528 38.3
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 1.9e-79 300.8 530 38.3
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 3.3e-79 300.1 459 42.3
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 2.8e-78 297.0 517 40.2
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 4.0e-77 293.1 507 37.3
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 6.8e-77 292.4 534 36.7
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 6.8e-77 292.4 503 39.0
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 2.6e-76 290.4 524 37.2
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 9.9e-76 288.5 493 39.8
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 5.4e-74 282.7 507 37.9
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 9.2e-74 282.0 508 38.2
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 1.3e-72 278.1 457 41.1
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 1.3e-72 278.1 425 43.1
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 3.3e-71 273.5 487 39.2
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 9.9e-68 261.9 513 36.1
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 4.2e-66 256.5 425 39.8
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 5.1e-64 249.6 461 38.0
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 3.6e-62 243.4 598 30.4
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 5.8e-60 236.1 282 49.6
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 5.4e-58 229.6 289 47.8
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 7.1e-58 229.2 261 47.5
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 9.3e-58 228.8 263 50.2
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 2.7e-57 227.3 254 51.2
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 3.5e-57 226.9 463 35.2
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 3.3e-55 220.3 262 48.9
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 3.3e-55 220.3 291 44.3
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 3.6e-54 216.9 243 49.8
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 4.8e-54 216.5 261 46.4
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.2e-52 211.8 360 40.3
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 8.4e-51 205.7 246 46.3
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 9.3e-50 202.2 430 37.0
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 1.0e-48 198.7 388 36.6
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 5.1e-48 196.4 588 27.9
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 9.0e-45 185.7 270 40.7
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 3.8e-43 180.3 145 64.1
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 1.2e-41 175.3 606 25.9
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 8.7e-40 169.1 305 37.4
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 1.5e-39 168.3 329 39.5
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 1.1e-37 162.2 305 36.4
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 2.4e-37 161.0 169 60.9
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 1.8e-32 144.8 242 36.0
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 5.0e-27 126.7 351 31.3
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.8e-21 108.2 111 49.5
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 2.3e-16 91.3 86 51.2
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 4.1e-13 80.5 85 40.0
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 2.0e-12 78.2 82 46.3
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 1.8e-08 65.1 74 52.7
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.5e-07 62.0 66 40.9
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 3.7e-06 57.4 54 51.9


User provided reference genes

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